Ll_transcript_486880

• Id Trinity: TRINITY_DN52374_c0_g1_i2
• Name Transcript: Ll_transcript_486880
• Sequence: TGCTTCTGCAACTCACTGCCGTAACCTTCGTAGCAGGAGAAAATATCTCTCTCCCACCTTTTACTCACACCAACGAATCAAAACGCACCGTTTCGCCACC ATGCCTTCTCTTCCCATCTCCAACGACGCCGTTTTCACCAGCGACAAGAAACTGAAGAAGGAAAAGAAAACCAAGAAAAACGACGCCGACAACGACAACG AGAACCACTCTCTAAACGACGCCGTTTCCGTTAAGAAGAGTTCTTCGAAAGAGAGCAAGAAGAAGCGGAAGAAGCTTTCATCTTCTGATGAGGAAGGTGA TGACGATGAAGATGAGAAGAAGAGTGAGAATGGCGATGAGGGTTTGAAATCGAAGAAGAAGAGTAAGAAAGCGAAGTTGGATATGGAAGAGGAAGAAGAG GTTGAGGTTGAACCTGAGAATCCAAACGCGGTGTCCAATTTCAAGATATCGGAACCGTTGAAAGCGAAACTGAAGGAGAATGGAATTGAAGCCCTGTTCC CGATTCAAGCCACGACATTCAAAATTATCCTCGATGGCTCCGATTTGGTTGGTCGTGCTCGCACTGGTCAGGGTAAAACTTTGGCTTTTGTGTTGCCCAT ATTAGAGTCTTTAACAAATGGTATGGCAAAAGCATCGAGGAAGGTGGGCTACGGGAGGACTCCAAGTGTCATTGTGCTTCTACCTACTAGGGAGTTGGCC AAACAGGTGCATGCTGATTTTGAAGCTTATGGTGGGGCAGTGGGACTGGCTTCTTGCTGTTTATATGGTGGAGCTCCATATCAGACTCAAGAGATGAAGC TCAAGAGGGGTGTTGATATTGTTATTGGCACACCTGGCCGCATAAAGGATCATATCGAGAGGGGAAACATTGACCTGAGCCTACTAAGGTTCCGTGTCCT TGATGAGGCTGATGAGATGCTGAGAATGGGTTTTGTTGAAGATGTTGAACTCATTTTAGGCAAAGTAGAAGATGTTAACAAAGTTCAGACACTTCTTTTC AGTGCTACATTACCAGTCTGGGTTAAGCAGATTTCTACAAGATTTTTGAAACGTGATAAAAAAACTGCTGATCTTGTCGGGAATGAGAAAATGAAGGCTA GCAACAATGTTAGACATATTGTTCTTCCATGCAATTTTTCTGCTAGGGCCCAGCTTATCCCCGACATCATTCGCTGTTATAGCAGTGGAGGCCGGACAAT TATTTTTACTGAGAAAAAGGAGTCTGCTTCTGAGCTCGCAGGGGTTTTGCCTGGAGCAAGACCTCTCCATGGTGACATACAACAGTCACAACGTGAGATT ACATTGTCAGGCTTTAGGTCTGGAAAGTTCTTGACATTGGTGGCCACAAATGTGGCAGCTAGGGGTCTGGATATTAATGATGTTCAGTTAATTATCCAGT GTGAGCCTCCAAGGGATGTTGAAGCATATATCCATCGTTCTGGACGTACAGGAAGAGCTGGTAATACTGGAGTTGCTGTGATGCTTTATGATCCCAGAAA GTCAAGTGTATCTAGAATAGAAAGAGAATCCGGTGTGAAGTTTGAACATATTTCTGCTCCCCAGCCTGATGATATTGCCAAAGCTGTTGGTGGGGAAGCG GCTGAAAAGATTTTGCAAGTGTCTGATAGTGTTGTTCCTGCATTCAAGTCTGCTGCTGAGGGGCTTTTGAACAATAGTGGTTTATCAGCTGTTGAATTAC TTGCAAAAGCTCTTGCCAAGTCTGTTGGTTTTACTGAGATAAAGAAAAGATCACTTCTGACTTCCATGGAGAATTATGTTACATTACAACTTGAAATCGG AAAACCCATGTTCACCCCATCTTTTGCATTTGGAGTCCTGAGGAGATTTGTACCTGAGGAGAAAGTCAACGAAGTGCAGGGTCTTACTATCACTGCAGAT GGAAATGGTGCTGTCTTTGATGTGCCGGCCAAACATTTAGATGCATTTCTTACTGGTCAGAAAAATGCTGGAAATGTAAGTCTGGAGGTGGTTAAAGCAT TGCCGCGTTTGCAAGAAAGAGAGGAATCCAAAATGGGTAGATTTGGTGGTGGTGGTCGCGGATTTGGTGGTAGTAGATTTGGTGGAAGAGGTGGTAGTAG ATTTGGTGGTGGGAGAGGTGGAAACAGAGGCGGAAGGAGATGGTAGAGATGGTTCATGGACCCCGCGGATCTCGGGGGTTCGATTTTTACCCTATGATTT GTTATTTATGTTTAACTATTAATCCCATTTTTCTCAATTTTGTGGCGAAATGTGTAACAATCGGATTTCTATATGATTGACAATGACAATGAACAAACGA AGAATATTTGTTTTGCTGTTTCTTTAAAGTTAGCATTTTACATGGTCCTGCTATAACTCCTCTCCCATGACCTATTTGATTCTTGACATTCAGGTAAACA ACATTTTGTTTGTTTGGGAAGCCATTTCCATCATGAAAG
• Tissue: pods
• Gene name: LI_gene_192200;
• Additional information: details;

Expression of Ll_transcript_486880

FPKM

• PAB: 0
• PNAB: 23.5
• PS1: 16.3
• PS2: 12.3
• PS3: 14.1
• PW1: 26.8
• PW2: 27.5
• PW3: 23.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_486880

• Blastp: DEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 75.97% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 76.17% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (AT5G62190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432804.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;