Ll_transcript_486882

• Id Trinity: TRINITY_DN52374_c0_g1_i4
• Name Transcript: Ll_transcript_486882
• Sequence: CTGTTATTGCAACTCAGTGCCGTAACCTTCAAAACAGGAGAAAATATCTCACACTCTTTCTCTCTTTCACCTTTTACTCACTCACTCACTCACACTTTCA TTACCATAACCCTAAACGCACCGTTTCGCCACCATGCCTTCTCTTCCTCTTTCCAACGACGCCGTTTCCAACGACAAGAAGCTCAAGAAGGAGAAGAAAG TGAAATCCACCGACAATGTCAAGAACCTGAACGACGCCGTTTCAGATAGCAAGAAGAAGAAGAGTGGCTCCAAGGAGATCAAGAAGAAGCGGAAGAAGGT TTCATCATCTTCTGAAGAAGAAGATGATGATGATGTGAAGAGTGAGACTAGTTCTGATGTTGTTGAGGGTTTGAAAACGAAGGAGAAGAAGAAGAGTAAG AAAGCGAAGGTGGAGGTGGAAGAGGAAGAAGAGACTGAGGCTGAGGTTGAAGTTGAGAATCCTAATGCGGTTTCCAATTTTAGGATATCGGAACCGTTGA AGGCGAAGCTGAAGGAGAAGGGGATTGAAGCGTTGTTCCCGATTCAAGCTATGACCTTCGATATCATTCTCGATGGCGACGATTTGGTTGGTCGTGCTCG CACTGGTCAGGGTAAAACTTTGGCTTTTGTGTTGCCCATATTAGAGTCTTTAACAAATGGTCCAGCAAAAGCATCAAGAAAGTTGGGCTACGGGAGGGCT CCAAGTGTCGTTGTGCTTCTACCTACTAGGGAATTGGCGAAACAGGTGAATGCTGATTTCGAAGTTTATGGTGGAGCAATGGGATTGTCTTCTTGCTGTT TATATGGTGGAGCTCCATATCAAGCTCAAGAGATTAAGCTCAGGAGGGGTGTTGACATTGTTATTGGCACACCTGGTCGTATTAAGGATCATATAGAGAG GGGAAATATTGACCTGAGCCTGCTTAGGTTCCGTGTCCTTGATGAGGCTGATGAGATGCTAAGGATGGGTTTTGTTGAAGATGTTGAACTTATTCTAGGT AAGGTAGAAGATGTTAACAAAGTTCAGACACTTCTTTTCAGTGCTACTTTACCAGTCTGGGTTAAACAGATTTCTACACGATTTTTGAAACATGATAAGA AAACTATTGATCTTGTTGGGAATGAGAAAATGAAGGCTAGCAACAATGTTAGGCATATTGTTCTTCCATGTAATAGTTCTGCCAGGTCCCAGCTTATCCC TGACATCATTCGCTGTTATAGCAGTGGAGGCCGGACAATTATTTTTACTGAGAAAAAGGAGTCTGCTTCTGAGCTCGCAGGGGTTTTGCCTGGAGCAAGA CCTCTCCATGGTGACATACAACAGTCACAACGTGAGATTACATTGTCAGGCTTTAGGTCTGGAAAGTTCTTGACATTGGTGGCCACAAATGTGGCAGCTA GGGGTCTGGATATTAATGATGTTCAGTTAATTATCCAGTGTGAGCCTCCAAGGGATGTTGAAGCATATATCCATCGTTCTGGACGTACAGGAAGAGCTGG TAATACTGGAGTTGCTGTGATGCTTTATGATCCCAGAAAGTCAAGTGTATCTAGAATAGAAAGAGAATCCGGTGTGAAGTTTGAACATATTTCTGCTCCC CAGCCTGATGATATTGCCAAAGCTGTTGGTGGGGAAGCGGCTGAAAAGATTTTGCAAGTGTCTGATAGTGTTGTTCCTGCATTCAAGTCTGCTGCTGAGG GGCTTTTGAACAATAGTGGTTTATCAGCTGTTGAATTACTTGCAAAAGCTCTTGCCAAGTCTGTTGGTTTTACTGAGATAAAGAAAAGATCACTTCTGAC TTCCATGGAGAATTATGTTACATTACAACTTGAAATCGGAAAACCCATGTTCACCCCATCTTTTGCATTTGGAGTCCTGAGGAGATTTGTACCTGAGGAG AAAGTCAACGAAGTGCAGGGTCTTACTATCACTGCAGATGGAAATGGTGCTGTCTTTGATGTGCCGGCCAAACATTTAGATGCATTTCTTACTGGTCAGA AAAATGCTGGAAATGTAAGTCTGGAGGTGGTTAAAGCATTGCCGCGTTTGCAAGAAAGAGAGGAATCCAAAATGGGTAGATTTGGTGGTGGTGGTCGCGG ATTTGGTGGTAGTAGATTTGGTGGAAGAGGTGGTAGTAGATTTGGTGGTGGGAGAGGTGGAAACAGAGGCGGAAGGAGATGGTAGAGATGGTTCATGGAC CCCGCGGATCTCGGGGGTTCGATTTTTACCCTATGATTTGTTATTTATGTTTAACTATTAATCCCATTTTTCTCAATTTTGTGGCGAAATGTGTAACAAT CGGATTTCTATATGATTGACAATGACAATGAACAAACGAAGAATATTTGTTTTGCTGTTTCTTTAAAGTTAGCATTTTACATGGTCCTGCTATAACTCCT CTCCCATGACCTATTTGATTCTTGACATTCAGGTAAACAACATTTTGTTTGTTTGGGAAGCCATTTCCATCATGAAAG
• Tissue: pods
• Gene name: LI_gene_192200;
• Additional information: details;

Expression of Ll_transcript_486882

FPKM

• PAB: 7.3
• PNAB: 72.7
• PS1: 30.5
• PS2: 31.9
• PS3: 39.4
• PW1: 78
• PW2: 71.8
• PW3: 80.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_486882

• Blastp: DEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 76.16% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 76.31% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (AT5G62190)
• CantataDB: Link to cantataDB annotations (CNT0002891)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432804.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;