Ll_transcript_486886

• Id Trinity: TRINITY_DN52374_c0_g1_i6
• Name Transcript: Ll_transcript_486886
• Sequence: TGCTTCTGCAACTCACTGCCGTAACCTTCGTAGCAGGAGAAAATATCTCTCTCCCACCTTTTACTCACACCAACGAATCAAAACGCACCGTTTCGCCACC ATGCCTTCTCTTCCCATCTCCAACGACGCCGTTTTCACCAGCGACAAGAAACTGAAGAAGGAAAAGAAAACCAAGAAAAACGACGCCGACAACGACAACG AGAACCACTCTCTAAACGACGCCGTTTCCGTTAAGAAGAGTTCTTCGAAAGAGAGCAAGAAGAAGCGGAAGAAGCTTTCATCTTCTGATGAGGAAGGTGA TGACGATGAAGATGAGAAGAAGAGTGAGAATGGCGATGAGGGTTTGAAATCGAAGAAGAAGAGTAAGAAAGCGAAGTTGGATATGGAAGAGGAAGAAGAG GTTGAGGTTGAACCTGAGAATCCAAACGCGGTGTCCAATTTCAAGATATCGGAACCGTTGAAAGCGAAACTGAAGGAGAATGGAATTGAAGCCCTGTTCC CGATTCAAGCCACGACATTCAAAATTATCCTCGATGGCTCCGATTTGGTTGGTCGTGCTCGCACTGGTCAGGGTAAAACTTTGGCTTTTGTGTTGCCCAT ATTAGAGTCTTTAACAAATGGTATGGCAAAAGCATCGAGGAAGGTGGGCTACGGGAGGACTCCAAGTGTCATTGTGCTTCTACCTACTAGGGAGTTGGCC AAACAGGTGCATGCTGATTTTGAAGCTTATGGTGGGGCAGTGGGACTGGCTTCTTGCTGTTTATATGGTGGAGCTCCATATCAGACTCAAGAGATGAAGC TCAAGAGGGGTGTTGATATTGTTATTGGCACACCTGGCCGCATAAAGGATCATATCGAGAGGGGAAACATTGACCTGAGCCTACTAAGGTTCCGTGTCCT TGATGAGGCTGATGAGATGCTGAGAATGGGTTTTGTTGAAGATGTTGAACTCATTTTAGGCAAAGTAGAAGATGTTAACAAAGTTCAGACACTTCTTTTC AGTGCTACATTACCAGTCTGGGTTAAGCAGATTTCTACAAGATTTTTGAAACGTGATAAAAAAACTGCTGATCTTGTCGGGAATGAGAAAATGAAGGCTA GCAACAATGTTAGACATATTGTTCTTCCATGCAATTTTTCTGCTAGGGCCCAGCTTATCCCCGACATCATTCGCTGTTATAGCAGTGGAGGCCGGACAAT TATTTTTACTGAGAAAAAGGAGTCTGCTTCTGAACTTGCTGGGGTCTTGCAGGGAGCAAGACCTCTCCATGGTGACATACAACAGTCCCAACGTGAGGTG ACTTTGTCAGGTTTTAGGTCTGGAAAATTCATGACATTGGTGGCCACAAATGTGGCAGCTAGGGGTCTGGATATTAATGATGTTCAGTTAATTATCCAGT GTGAACCTCCACGGGATGTAGAAGCATACATCCATCGTTCTGGACGTACAGGAAGAGCTGGTAATACTGGAGTTGCTGTAATGCTTTATGATCCCAGAAA GTCAAGTGTATCTAGAATAGAGAGAGAATCAGGTGTCAAATTTGAACATGTATCGGCTCCTCAGTCTGATGATATTGCCAAAGCTGTTGGTGGGGAAGCT GCTGAATTAATTTTACAAGTATCTGATAGTGTGGTTCCTGCATTCACATCTGCTGCTCAGGGGCTTTTGAATAACAGCGGTTTATCAGCTGTTGAATTAC TTGCAAAAGCTCTAGCCAAGGCTGTTGGTTTTACTGAGATAGTGAAAAGATCACTTCTGACTTCCATGGAGAATTATGTCACATTACAGCTTGAGATTGG AAAACCTATTTTCACCCCATCTTTTGCATTTGGAATCCTGAGGAGATTCGTGCCGGAGGAGAAGGTTAACACAGTGCAGGGTCTTACTATCACTGCAGAT GGAAATGGTGCTGTTTTTGATGTACCAGCAAAAGAGTTAGATGCATTTATTACTGGTCAGCAAAATGCTGCTAATGTAAGTCTGGAGGTGGTGAAAGCAT TGCCGCAGTTGCAAGAAAGAGACCAGTCAAAAGTGAGCAGATATGGTGGTGGAGGTCGTGGGTTTGGTGGAAATAGATTTGGTGGAAGAGGAGGTGGCAG GAATAGTAGATTTTCAGGTGGTTACGGTGGTGGTAGAGGCGGAAAGAGATGGTAAAGGAGTTAGTGAGATGATGGTTCATGAGCCCCATATCCGTGAGCT TAATTTTTAACCTATAGTTTGTTATTTGTGTTGAACTATTATTAATCCCATTTATCTCAATTTTTACATGAACATGTAAGAATTGAATTTCTATAGGATT GACAATGATAATGAAGAAAAGAGAAATATTTATTTTGCCATTTGTTTCACCGCCAAGTTTCTATACTAACATGGTTTGTTATAATTCCTCT
• Tissue: pods
• Gene name: LI_gene_192200;
• Additional information: details;

Expression of Ll_transcript_486886

FPKM

• PAB: 4.1
• PNAB: 28.4
• PS1: 13.7
• PS2: 8.6
• PS3: 12.5
• PW1: 34.9
• PW2: 28.3
• PW3: 32.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_486886

• Blastp: DEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 75.42% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 75.61% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (AT5G62190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449411.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;