Ll_transcript_486887

• Id Trinity: TRINITY_DN52374_c0_g1_i7
• Name Transcript: Ll_transcript_486887
• Sequence: CTGTTATTGCAACTCAGTGCCGTAACCTTCAAAACAGGAGAAAATATCTCACACTCTTTCTCTCTTTCACCTTTTACTCACTCACTCACTCACACTTTCA TTACCATAACCCTAAACGCACCGTTTCGCCACCATGCCTTCTCTTCCTCTTTCCAACGACGCCGTTTCCAACGACAAGAAGCTCAAGAAGGAGAAGAAAG TGAAATCCACCGACAATGTCAAGAACCTGAACGACGCCGTTTCAGATAGCAAGAAGAAGAAGAGTGGCTCCAAGGAGATCAAGAAGAAGCGGAAGAAGGT TTCATCATCTTCTGAAGAAGAAGATGATGATGATGTGAAGAGTGAGACTAGTTCTGATGTTGTTGAGGGTTTGAAAACGAAGGAGAAGAAGAAGAGTAAG AAAGCGAAGGTGGAGGTGGAAGAGGAAGAAGAGACTGAGGCTGAGGTTGAAGTTGAGAATCCTAATGCGGTTTCCAATTTTAGGATATCGGAACCGTTGA AGGCGAAGCTGAAGGAGAAGGGGATTGAAGCGTTGTTCCCGATTCAAGCTATGACCTTCGATATCATTCTCGATGGCGACGATTTGGTTGGTCGTGCTCG CACTGGTCAGGGTAAAACTTTGGCTTTTGTGTTGCCCATATTAGAGTCTTTAACAAATGGTCCAGCAAAAGCATCAAGAAAGTTGGGCTACGGGAGGGCT CCAAGTGTCGTTGTGCTTCTACCTACTAGGGAATTGGCCAAACAGGTTCATGCTGACTTTGAAGTTTATGGTGGGTCATTGGGATTGGTTTCTTGCTGTT TATATGGTGGAGCTCCATATCAGACTCAAGAGATGAAGCTCAAGAGGGGTGTTGATATTGTTATTGGCACACCTGGCCGCATAAAGGATCATATCGAGAG GGGAAACATTGACCTGAGCCTACTAAGGTTCCGTGTCCTTGATGAGGCTGATGAGATGCTGAGAATGGGTTTTGTTGAAGATGTTGAACTCATTTTAGGC AAAGTAGAAGATGTTAACAAAGTTCAGACACTTCTTTTCAGTGCTACATTACCAGTCTGGGTTAAGCAGATTTCTACAAGATTTTTGAAACGTGATAAAA AAACTGCTGATCTTGTCGGGAATGAGAAAATGAAGGCTAGCAACAATGTTAGACATATTGTTCTTCCATGCAATTTTTCTGCTAGGGCCCAGCTTATCCC CGACATCATTCGCTGTTATAGCAGTGGAGGCCGGACAATTATTTTTACTGAGAAAAAGGAGTCTGCTTCTGAGCTCGCAGGGGTTTTGCCTGGAGCAAGA CCTCTCCATGGTGACATACAACAGTCACAACGTGAGATTACATTGTCAGGCTTTAGGTCTGGAAAGTTCTTGACATTGGTGGCCACAAATGTGGCAGCTA GGGGTCTGGATATTAATGATGTTCAGTTAATTATCCAGTGTGAGCCTCCAAGGGATGTTGAAGCATATATCCATCGTTCTGGACGTACAGGAAGAGCTGG TAATACTGGAGTTGCTGTGATGCTTTATGATCCCAGAAAGTCAAGTGTATCTAGAATAGAAAGAGAATCGGGTGTGAAATTTGAACACATATCTGCTCCT CAGCCTGATGATATTGCCAAAGCTGTTGGCGGGGAAGCTGCTGAAATGATTTTGCAAGTGTCAGATAGTGTGGTTCCTGCATTCAAGTCTACTGCTGAGG GGCTTTTGAATAACAGTGGTTTATCAGCTGTTGAATTACTTGCAAAAGCTCTTGCCAAGGCTGTTGGTTTTACTGAGATAAAGAAAAGATCGCTTCTGAC TTCCATGGAGAATTATGTTACATTACTTCTAGAGATCGGAAAACCCATCTTCACCCCGTCGTTTGCATTTGGAGTCTTGAGGAGATTAGTGCCGGAGGAG ATGGTTAACACAGTGCAGGGTCTTACTATCACTGCAGATGGAAATGCTGCTGTTTTTGACGTACCTGCCAAAGATTTAGATGCATTTATAACCGGTCAGC AAAACGCTGCCAATGTAAGTCTGGAGGTGGTGAAAGCATTGCCGC
• Tissue: pods
• Gene name: LI_gene_192200;
• Additional information: details;

Expression of Ll_transcript_486887

FPKM

• PAB: 0.3
• PNAB: 1
• PS1: 1.2
• PS2: 0.9
• PS3: 2
• PW1: 2
• PW2: 2
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_486887

• Blastp: DEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 76.07% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 76.23% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (AT5G62190)
• CantataDB: Link to cantataDB annotations (CNT0002891)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449411.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;