| Id Trinity | TRINITY_DN52377_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_486778 |
| Sequence | CTATCTTTCACTCCTCTCTCATTCACTATCATAACCCTAACTTCCCCTTCTCTCGTTCAATTCCGAGAGCCACCACACTCCCCAGCCGCGACGCCTCTTC CGCCGTCACAAACCTTTCCGTCCGGCGCTACTAAGCCATCATCACCATCCGAGGTAACTTCACTTGTTTGTGTTGGTTAGTTCTGTAGAACACAAAAATC GATCGTCACTATTTTTTGCTCTACTAGTTAAAAGATGTCTTCTACGCTCGAAATCGAAGCTCGAGATGTGATCAAAATTGTGCTTCAGTTTTGCAAAGAA AATTCATTGCATCAGACGTTTCAGACGCTGCAGAACGAATGTCAGGTATCTTTGAACACTGTTGACAGCAATGAAACCTTTGTTGCTGATATTAATAGCG GAAGATGGGATGCCATTTTGCCTCAAGTTTCTCAACTTAAGCTTCCTCGGAATAACTTGGAGGATTTGTATGAGCAGATTGTATTAGAAATGATTGAGCT TCGGGAACTAGATACCGCACGCTCAATTTTAAGGCAAACACAGGTCATGGGTGTCATGAAACAAGAGCAGCCTGAAAGATATTTGCGTCTTGAACATCTC CTTGTTAGAACTTATTTTGATCCAAACGAGGCTTATCAAGACTCGACAAAAGAGAAGCGACGTGCCCTAATAGCCCAAGCTATCGCTGCACAAGTTACTG TAGTGCCACCTTCCCGATTGATGGCTCTAATTGGCCAGGCTTTGAAGTGGCAGCAGCATCAAGGGTTGCTTCCTCCTGGAACGCAGTTTGATTTGTTTCG TGGAACAGCTGCTATGAAACAAGATGTGGATGACATGTATCCAACAACTCTCTCTCACACAATAAAGTTTGGGACAAAAAGTCACGCGGAATCTGCTTGT TTTTCACCAGACGGGCAGTTTCTAGTATCTTGCTCAGTTGATGGGTTTATTGAGGTCTGGGATTACATAAGTGGAAAACTGAAGAAAGATCTCCAGTACC AAGCAGATGAAGTATTCATGATGCATGACGATGCCGTGCTTTGTGTAGACTTCAGCCGAGATTCAGAGATGCTTGCATCTGGGTCACAAGATGGAAAGAT CAAAGTTTGGCGTATAAGGACTGGGCAATGCTTGCGGCGTCTTGAACGTGCACATTCCCAAGGTGTGACAAGCCTTTCCTTCTCGCGTGATGGAAGCCAG CTACTAAGCACTTCATTTGACAGTACAGCGAGAATTCATGGCCTCAAATCTGGAAAGATGTTGAAAGAGTTTCGTGGTCATACCTCTTATGTGAACGATG CAATTTTTACAAATGATGGGAGTCGAGTTATTACTGCATCCAGTGATTGTACAATCAAGGTTTGGGATGTGAAGACGACCGACTGCATACAAACTTTTAA GCCTCCTCCTCCTTTAAGGGGAGGTGATGCTTCGGTCAACTCTGTTCACATCTTCCCGAAGAATACTGATCATATTGTTGTTTCTAATAAAACGTCATCA ATATATATCATGACACTTCAAGGACAGGTATATGTTAAAATGTTGATTAGTGGATGTCATTTTGTTCATATTCGGTTTCAGAGAATCTTGATATTAGGAT CAAGGTTGTTGCCAATGGTTTCCTTAATGTTTTATGTGTGTTCCTGACAAGGATACATGTATCCGGCTCTCAGATTGGAGAACCTTATCCCCGTGCTAAT CTTGCCCTCTATTTTGTTTTTGTGTGTTCTGAAAGTGAAATATATAATTATTTATCCTACCACCTATATTTTTCTGCATTCTGAGAATAATAGGTTGTTC CATAACTTCTGTTTGAGATTAAAATATACATGCTTTATTATGTAACTAAATTTTTATTTACAGATGTCTTATACCTTATCATGTAGGTTTGCTTTCTAAA CTAATCAAAGTCTGAAACTCCTAAAAAAATGGGTTTGATTGAGTTTACTGCATTAGATAACCTTTCATATTATATCCCTGTGTACTAAAGATGTGTTTTG ACCTTGACATAGTTTTATATTCACAAAGATTCTTATCATGACCTGGGATTGGCATTTAGTTGAGCAACATATAAGTGGAAAGTAGCCATTCATCTGATGA CTTAAGGTTATGGGTTGGATGTGTTCATTATACTTGTGTGGTTCTCACTTAGCCCATTCATGAGCTCCCTAGTGTTTTCAGCTCCCCCAATTTCCTAACT TGATATCAAGGCCTATCTCGATTTTTCAATATTTCTCAATTAATGGCATTGCTAAGTTTGTCCTCTCCTATTTCAATACATATGAAATCACTTTCTTTTG TGTACTGTGGTGCCCTTTAGTTCCATGTTTTATTGCCGTATGTGCTATTATTCAGATGCCAAATACTGTCCACATATTAGATGAGGCAGATGTTGAATCT GGACCATTCTTAAAAGGCTGCCATGTGACAAAGAATACTATCTCATTATGTTTAGACACGCATTTATCTAATGTATATGTGCAATTGTGGTCATTCTATT CTTAGTATGCTTTTCTATCAAATGGTGTAGGTTGTAAAAAGCTTCTCATCTGGTAAAAGAGAGGGTGGAGACTTCGTTGCAGCCTGTGTTTCACCTAAAG GGGAATGGATTTACTGTGTTGGTGAAGACAGGAATCTATACTGTTTCAGCTACCAATCTGGCAAATTGGAGCATCTGATGAAGGTATGTTGGTTGAATTA TCCTGAGACTAGATCTGTAAAACTTTATATAAGTTCCAGAAACCTAGTAGTACTGATTTTTTTACGGGTTACGCTTCTCTAGTGAGCATGAAAGACCACC ACAAATTCACCACAGTGCTACAAGCTCAAGTGCTAGCATGTGTTTGCATTATATATACACATTGCTGTGTTATGTAATGTAAATCACCTTGTCTTCCTAG ATAATTGTATCGGCCACGATTATCCGAGTTGAATCCAACGTTAAAGTGCAGATTTGTGTAAACTTTGTAAATACTGAACTAGAATTGGAATCAGCAAGGC TTAATTTAAAAGTGGCAGTTAAATGACCATTTAATTCTCACGCACCTTGGATTCTATCTATACATGCATTTCTTAGGCTTACTTAAAAGGGGTATGCTTA TTTTCTGTTCATGATGTCTGTAATATATTTTTCATGATTAGTAAAATTCTGGTCCTCTGACTAATGCATGTTCAGGAGAAGGAAGTTATAGGTATGACTC ATCATCCACACAAGAATCTTGTTGCAACTTATGGTGAAGATTGCACAATGAAATTGTGGAAGCCTTAAACATTTTCTACTTTGGCTCAATTTTTTTCTGA AAAAATAATAGACATGCATTTGTTTGTGCAATGTATATTACTTAATTTGTTAAGATGTGTATTGTCATTGAAATTATTCATCTTCCTGAGCATGATGATT GGAATTACCTACTTGAGTAGCTTCAACATGTTATTAGATTAATATGCTTTTGGGATTTCAGTGCTCAACTAGTGCTCAATGTTTTTACAGTCAAATTTGC C BLAST |
| Tissue | pods |
| Gene name | LI_gene_192212; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_486778
| Blastp | Suppressor of mec-8 and unc-52 protein homolog 1 from Arabidopsis with 86.93% of identity |
|---|---|
| Blastx | Suppressor of mec-8 and unc-52 protein homolog 1 from Arabidopsis with 86.73% of identity |
| Eggnog | Smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)(ENOG410XP39) |
| Kegg | Link to kegg annotations (AT1G73720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414864.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |