Ll_transcript_487976

• Id Trinity: TRINITY_DN52391_c0_g1_i11
• Name Transcript: Ll_transcript_487976
• Sequence: TTACAATTCTTCTTTTTCTTCTTCTTCTTCTCCGTAACCTCTCTCTCTCACTTGAAATTCATATTGAGAACTCTCTCTTCTCAGATCTGAACTCCACCGC ACCAGATCCAATGGAAGAAGCGTTGGAACTCGCACGCGCCAAGGACACGAAGGAACGAATGGCTGGAGTGGAACGTCTCCACCAACTTCTAGAAGCTTCT AGAAAGAGCCTCACATCTTCTGAAGTAACCTCTCTCGTTGATTCCTGTTTAGATCTACTGAAGGATAACAACTTCAGAGTCTCTCAGGGCGCGCTTCAGG CACTCGCCTCCGCCGCCGTTCTCTCCGGCGACCACTTCAAACTCCACTTCAACGCTCTCGTTCCCGCCGTCGTTGACCGCTTAGGCGATTCAAAACAGCC TGTTCGCGACGCCGCCAGAAGACTCTTGCTCACTCTCATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGGGCAGGGTCCTTTGCTTGGGCACACAGA AGCTGGAGAGTCCGGGAGGAGTTCACACGAACTGTCACATCTGCAATTGATTTATTTGCATCTACTGAGCTTCCGCTTCAACGGGCTATCTTCCCTTCTG TTTTGCATTTGCTGAATGATCCTAATCCTTCTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGTACAAGCTGGACCTCAATTTCGTGATGA ACTTCAACGCCACAACCTTCCTTCGTCTTTGGTGAAAGATATTAATGCCCGGCTAGAGGGAATTCAACCAAAAGTTCGTGCTTCAGATGGTGTTCCGAGT GGTTATATTACTGGGGAAATTAAGCCTTTGAGTGTTAATCCCAAAAAAAGTAGTCTAAAGGCTAAAAATTCAACAAGGGAGACCTCTCTTTTTGGAGGAG ATGGCGATGTCACTGAGAAACCTTTAGACCCCATCAAGGTATATTCAGAGAAGGAGTTAATCAGGGAAATTGAGAAGATTGCGTCTACCCTTGTACCAGA AAAAGACTGGTCAGTTCGTATTGCTGCTATGCAGAGAATTGAAGGTCTTGTTCTAGGAGGTGCTGCTGATTATCCATGTTTCCGTGGACTTCTGAAACAA CTTATTGGACCGTTAAGCACACAATTGTCAGATCGAAGGTCTAGCATTGTCAAGCAGGCTTGCCATTTACTGTGCTTTTTGTCAAAGGAACTCTTGGGTG ATTTTGAAGTATGTGCTGAAATGTTTATTCCAGTCCTTTTCAAGCTGGTTGTGATAACTGTGCTTGTAATTGCAGAGTCTTCAGACAACTGCATTAAAAC GATGCTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCTCGTATAGCTGATTGTGCAAAAACTGATCGCAATGCAGTACTTCGTGCAAGGTGTTGTGAATAT GCTCTTTTGGTCCTAGAACATTGGCCTGATGCACCTGAAATACACCGGTCGGCTGATTTATATGAGGATATGATAAAGTGTTGTGTCAAAGATGCAATGA GTGAGGTACGATCTACTGCAAGGATGTGCTACAGAATGTTTGCGAAAACTTGGCCAGAGCGTTCTCGACGCCTATTTCTGTCCTTCGATCCTGTTATTCA AAGGTTAATAAATGAAGAAGATGGAGGAATACATAGGCGACATGCTTCACCTTCCGTTCGTGATAGAGGTGGAACGATGTCATTACCCAGTCAAGCCGCT GCTACATCTTATTTATCTAGTTATGGAACTTCAGCTATTGTTGCAATGGATAGAAGTTCAACTTTATCATCTGGGACATCTATCTCCTCTGGTGTACTTC TGTCACAAGCTAAGTCACTTGGAAAGGGTACAGAACGAACTTTGGAAAGTGTTTTACATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAG AGGTCTGGATTTGTCTGATAAACACAATTTATCTCAACGGCCATCAAGTTTGGATCTAGGAGTTGACCCTCCCTCATCTCGTGATCCACCATTCCCTGCT GCTGTTCCCGCCTCTAATCATTTGACAAGCA
• Tissue: pods
• Gene name: LI_gene_192347;
• Additional information: details;

Expression of Ll_transcript_487976

FPKM

• PAB: 2.2
• PNAB: 10.3
• PS1: 8.3
• PS2: 7.7
• PS3: 6.9
• PW1: 9.5
• PW2: 11.2
• PW3: 7.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_487976

• Blastp: CLIP-associated protein from Arabidopsis with 79.88% of identity
• Blastx: CLIP-associated protein from Arabidopsis with 79.88% of identity
• Eggnog: cytoplasmic linker associated protein(ENOG410ZMY0)
• Kegg: Link to kegg annotations (AT2G20190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444406.1)
• Pfam: HEAT repeat (PF02985.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;