Ll_transcript_487985

• Id Trinity: TRINITY_DN52391_c0_g1_i16
• Name Transcript: Ll_transcript_487985
• Sequence: ATTTGATAGTTCCAATAAAAAGTTTAAAAAATAAAGTGAAGAAGTTAGTAAATTCTGAGTATTATCTACACTAAAATACTACCATACTAATTGAGTATCT TCTATACTACTATAGTAACATTTGCATGTAATAACCAGTAAATGATATCTCATCTCATCTTAATTTTTCTTTCTCAGTTTCTCTCTCTTGAATTTTCTGC TGTAGCAAATTTTTTTTCTCTATCTTGAATTGAAACTCATCACTCTATCTCTCTCTGCATTCGAATCACTAACACACACTCACGCTCTCTGATTCAGCAC CAGATCTGAAGCCGTCCGCACCAGATCCGAGCCCAACAAATGGAGGAAGCGTTGGAACTTACACGCGCCAAGGACACGAAAGAAATAATGGCGGGAGTGG AGCGTCTCCACCAACTTCTAGAAGCTTCTAGAAAGAGTCTCACTTCTTCTGAAGTAACGTCGCTCGTTGATTCGTGTTTGGATCTGTTGAAGGACAACAA CTTCAGAGTCTCTCAGGGCGCGCTTCAGGCTCTCGCCTCCGCCGTCGTTCTCTCCGGCGAACACTTCAAGCTTCACTTCAACTCTCTCGTCCCAGCCGTC GTTGATCGCCTCGGCGATGCTAGACAGCCGGTTCGCGATGCCGCGAGAAGACTCTTGCTCACTCTCATGGAGGTTTCTTCTCCTACAATAATTGTTGAAA GGGCAGGGTCCTTTGCTTGGGCACACAGAAGCTGGAGAGTCCGGGAGGAGTTCACACGAACTGTCACATCTGCAATTAATTTATTTGCATCTACTGAGCT CCCGCTTCAACGAGCTATTCTTCCTCCTGTTTTGCATTTGCTGAATGATCCTAATCCTGCCGTTAGAGAAGCAGCTATTTTGTGCATTGATGAGATGTAT GTACAAGCTGGGACTCAATTTCGTGATGACCTTCAACGCCATAATCTTCCGTCATCTTTGGTGAAAGATATTAATGCCCGTCTAGAAGGAATTCAACCAA AAGTTCACGCTTCAGATGGTGTTCCAAGTGGTTATATTACTGGGGAAATTAAGCCTTCGAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAACATTC ATCAAGGGAAGCCTCTCTTTTTGGAGGAGATGGTGATGTCACTGAGAAACCTGTAGACCCCATTAAGGTATATTCAGAAAAGGAGTTAATCAGAGAGGTT GAGAAGATTGCGTCTACCCTTGTACCACAAAAAGACTGGTCAATTCGTATTGCTGCCATGCAGAGAATTGAAGGTCTCATTCTAGGAGGTTGGTGTTTCC ATACTCCCCGTCAAGAGTATGCACAAAATTACCTATACATGCTTATAGTATGTCATAGGAGCTGGACCAGAATTCCAAAGAACAAGTAAAGAAATGAATA TTATTGCTTTTTCCACTGAATTCCCAGGATTTCCAGAGCCTGGCCTCTCCCTCACTCTTCCGGTATTCGAGAGATCTGATTCTCTCCGTATGCTTCACTA CTCTCAATTCCTGAATGAATCTCTCCCTTTGAACTCATTTATTTTTATTTGAAACATGCTTTATTTCTCCAATTATCTCAACCTCTAACTAACTAATACA CACATTGACAGACACCGGACATGTATTCCAACAACCAAATTAGGGCTTGACTAACAATATGCCTCAGTCTCATGATTATATTCCTTTTTGAGATTAGAAA GGCAAGAACATTGGCCTGTTTTTAGGATACCTTTAACTTGAAGGATTGGCTTGAAGGGCGTTTATGGTGGTCTTATAAGAATTTGGTATTAGATTTTAAT TGTTGATGTTGATCCAATACATAAGTTTTTTTAACTTTACTATGATATCTAAGAATTATAGAAATGAGTACACCTTTGATATAATTTAAAAAGCAAACTT ATGATTGTAGGGCTACTACAACTGGTGAGGGATAACAGTCAACCAAGTGTGTGATTCCATGTGTAGAGGTGTAGTTTTTAGGATCCTAGTCCTACCAAAG AAAGGGGGTAGGGGGCTTGGTGGGTTGAACTTTTTTGCACATATCAAAATAAACTGAGTAGATTCGACATTTCTTTAGATCTATTTCATTATTTTATTTT GAGTTCTCTGCCTTGCTTTTCTTTTTATTTTATAAACTTTTTGACTGTTAAGGAAATTTACCTCATTTGTTATTTATTAATTATTGTCATTTTCACTGAG CTTTTAAAGTCACCCACCAAGGCACTCTTGAACGCATTTTTAATACTCTATCAGGTGCTGCTGATTATCTGTCTTTCCGTGGACTTCTGAAACAACTTAT TGG
• Tissue: pods
• Gene name: LI_gene_192347;
• Additional information: details;

Expression of Ll_transcript_487985

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.1
• PS2: 0.3
• PS3: 0
• PW1: 0.1
• PW2: 0.1
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_487985

• Blastp: CLIP-associated protein from Arabidopsis with 76.23% of identity
• Blastx: CLIP-associated protein from Arabidopsis with 76.23% of identity
• Eggnog: cytoplasmic linker associated protein(ENOG410ZMY0)
• Kegg: Link to kegg annotations (AT2G20190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444406.1)
• Pfam: HEAT repeat (PF02985.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;