Id Trinity | TRINITY_DN52391_c0_g1_i7 |
---|---|
Name Transcript | Ll_transcript_487970 |
Sequence | ATAATTTTCAATTTCATTTCTCTCTCCATCTTCACTATCTCTCTCACAATTCAACTCTTCCCCCAAAGTTCTCGTAATTTCTTCTCTTTCTCACTCAACA CTTTCTAATTTAAGCATCTACATTCAAATTCCCACACTCTAACTTCATCACTCTCTACTGCTATTCTCTTCTGAATCTCCAACACCACACTCCACCAGAT CTGAACCCTCCCACACCAGATCCGAACCCTCCGCAATGGAGGAAGCGTTGGAGCTTGTTCGCGCCAAGGACGCAAAGGAACGCATGGCTGGAGTAGAGCT TCTCCATCAGCTTCTAGAAGCTTCTAGAAGAACCCTCACTTCTACGGAAGTAACTAACCTCGTTCGTTGTTGCTTGGATCTGTTGAACGATAACAGTTTC AGAGTCTCTCAGGGCGCGCTTCAAGCGTTGGCCTCCGCTGCCGTTCTATCTGCTGAGAATTTTAAGCTTCACCTCAACACGATTGTTCCGGCTGCCGTTG ATCGCCTTGGCGATGCGAAACAGCCGGTTCGGGATGCGGCGAGAAGGCTCTTGCTCACTCTTATGGAGGTTTCCTCTCCTACAATAATTGTTGAAAGAGC AGGGTCCTTTGCTTGGACATGCAAAAGCTGGAGAGTCAGAGAGGAGTTTGCACGAACTGTCACATCTGCAATTGGCCTATTTTCATCTACTGAACTTACC CTTCAACGGGTTATTCTTCCTCCCATTTTGCAGTTGCTGGATGATCCGAATCCTGCTGTTAGGGAAGCAGCTTGTTTATGCACTCAAGAGATGTATGCAC AAGCTGGGTCTCAATTTCGTGATGAACTTCAGCGTCACGATCTTCCTTCATCTTTGGTGAAAGATATTAATGCCAGGCTAGAGGGCATTCAACCAAAAGT TCGCTCTTCAGATGGTAGTGGTTACAATGCCGGGCAAATTAAGCCTTTGAATGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAG AGCTCTCTTTCTGGAGGAGATGGTAATGTCACAGAGAAACCCATAGACCACATCAAGGTGTATTCAGAGAAGGAATTAATCAGGGAAATTGATAAGATTG CATACACCCTTGTGCCAGAAAAGGACTGGTCAATTCGTATTGCTGCCATGCAGAGAATTGAAGGTCTTGTGTTGGGAGGGGCTGCTGATTTTTCATGTTT CCATGGACTCTTGAAGCAGCTTGTAGGACCTTTAAGCACACAATTGTCAGATCGAAGGTCTACCATTGTGAAGCAGGCTTGCCATCTATTATGCTTATTG TCAAAGGATCTCATGGGTGATTTTGAAGCATGTGCTGAAATGTTCATACCAGTCCTTCTGAAGCTGGTTGTGATTACTGTGCTTGTAATAGCTGAGTCTG CGGATAACTGCATAAAAACAATGCTGTGCAACTGCAAAGTTGCCCGTGTGCTGCCTCGCATTGCTGATTGTGCAAAAAATGATCGTAATGCAGTACTCCG TGCAAGGTGTTGTGATTATGCTCTTTTGATGCTTGAAAATTGGCCTGATGCTCCAGAAATACAGCGATCAGTTGATTTATATGAGGATATGATAAGGTGT TGTGTTTCTGACGCAATGAGTGAGGTGCGATCTACTGCAAGGATGTGCTACAGAATGTTTGCAAAAAGTTGGCCAGAGCGGTCCCGCCGCCTATTTTCGT TCTTTGACCCTTCTATTCAAAGGTTAATAAATGAAGAGGATGGTGGAATACATAGGCGACATGTGTCACCTTCCGTTCATGATAGAAGTACACGGATGCC ATTAACTACTCAAGCTTCTGTTCCATCTAATATACCTGGTTATGGAACTTCTGCTATTGTTGCAATGGGCAGAAATTCAAGTTTATCATCAGGGACATCT ATTTCCTCTAGTGTTTTTCTGTCACATGATAAAGGTACAGAACGTAGTTTGGAAAGTGTGTTGCATGCAAGCAAACAGAAAGTCTCTGCTATTGAAAGCA TGCTCAGAGGTTTGAATATGTCCGATAAGCATAATTTGGCTGCTCTACGGTCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACC ATTCCCTGCAGTTGTCCCAGCATCTAATCATCCGACTAGCTCTTCAATGACAGAATCAACTCCCTCTGTTGTCAATAAAGGTATTAACCAAAATGGTGGT TTGGGTCTGTCTGACATAATCACCCAAATTCAATCTTCCAAAGATTCTGGCAAGTTATCATATCATAGTGATGTTGGTATCCAGTCTTTATCAGCATTGC CATCATATTCAAGTAAAAGGGGTACTGAAAGATTACAAGAAAAAAGTTCCATTGACGAAAACAGTGACATTAAGGAGGCTAGGCGATATATGAACCCGGA CACCAATAGGCATTTTATAGATACACCTTACAGAGATGACAACTTCAGGGATTTTCAGAATAATTATGTGCCTAATTTCCAGAGGCCACTACTGAGAAAG AATGTAGCGGGACGTATGTCTGCTGGCAGGAGGAGTTTTGATGATAGCCATTTATCTCTTGTGTCAAATTATGTAGAGGGACCAGCATCTCTTCACGAAT CTCTGTGTGAAGGACTTAGTTCAGGTTCTAACTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTCCACTCTTTGTTGCAGCAAGGTCAAAAGGGAACTCA AGAAGTACTGCAGAATTTTGAGAAGGTCATGAAATTGTTTTTCCAGCACTTAGATGATCCCCACCATAAAATTGCACAGGCTGCTCTTTCCACACTAGCA GATATCATTCTAGCATGCAGAAAGCCCTTTGAGGGTTATATGGAACGAATGCTGCCCCATGTGTTTTCTCGGTTAATTGACCCCAAAGAGCTTGTTCGGC AGGCATGCTCGGCAACTTTGGAGGTTGTTAGCAAAACATACAGTATAGATTCTCTCTTACCTGCATTGCTACGCTCACTCGATGAACAAAGGTCTCCAAA GGCAAAATTGGCTGTCATCGAGTTTGCAATTAGCTCCTTTAAGAAGCATGCAATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTGAAATTATGGCTT GTTAAGTTAACCCCATTGGTTCATGACAAAAATACAAAGCTTAAAGAAGCAGCTATTACATGCATTATATCGGTGTACTCTCACTTTGATTCAACTGCAG TTCTGAATTTTATCCTTAGTTTGTCAGTTGAGGAACAAAATTCTTTGAGACGAGCCCTTAAGCAACGCACACCTCGCATTGAAGTGGAGTTGATGAACTA TCTGCAGAACAAGAAAGAGCGGCAACGTAAGTCTTCCTATGATCCATCTGATGTTGTGGGGTCATCTTCTGAAGATGGATATGTCGGCTTTTATAGGAAA AATCATTACCTTGGAAGGTATTCTGCTGGTTCTCTAGATAGTGATGGTGGAAAGAAGTTGACTTCCCACGATTCAACCATGATTAAAGCCAGTACTGGCC TAGCAGCTTCTGATGAAACTCAGGAGCATTCATATCAGAATCCTGAGATTGATTCTAATAGTGGTATTCTCGATTCAAAAAGTAAAGATCATACTTATAC ATTCAACATGGCTCAAAACTTTGGTTTTGAAACAAGCCAAGTAGGACATGTAGACAATAGTATAAACTTTGAGGGTCTATCATCTCATCTGGATGCTAAT GGTCTGATGTCATTAGAACATATAAATGTTTCTCAAGGCTTTGAAAATGACGAAGAACATCTTTCCGACTGGAACCATAATAATTATTCAGCTGAAGAAG TGACGGTTAACTCCATGACAGACACAGGGCCCAGCATTATTCAAATTCTTCATATGATATGCAGTGGGAGTGATGGAAGCTTTGTTTCAAATAAGAAGAC CGCACTTCAACGGCTAGTTGAAGCTTCTATAGCAAATGACCATGCTGTTTGGACCCAGTATTTCAATCAGATTTTGACTGCTATACTTGAGGTGCTGGAT GATCCAGATTCCTCGATTAGAGAGCTTACTCTTTCATTGATAGTTGAAATGCTTAAAAACCAGAAACTTGCCATGGAAAATTCAGTCGAGGTTGTAATTG AAAAGCTGCTTAATGTTACAAAGGACATTGTTCCTAAGGTCTCAAATGAAGCAGAGCACTGTCTGACCATTATTTTATCTCAGGACGATCCTTTCAGATG TTTAAGTGTTATTGTCCCTCTACTGGTCACAGGAGATGAGAAAACTCTCGTCACTTGCATTAATTGCTTGACAAAGCTTGTTGGCCGGCTCTCTCAGGAG GAACTGGTGGCTCAGTTACCCTTGTTTCTGCCTGCTCTTTTTGAAGCTTTTGGAAATCAGTGTGCAGATGTTCGCAAGGTATGTGGGTTTATCTGCAGTA AGTTATGTCCCTCTTCTTCATACATCTAATGAAATTTTAGATGGTAAATTATTTTATCCCCAGTCATAGAAGGGTGTAAAGTGTTCTGTGTAGTTATAAC AAATTTATCTGACAACTGGAGATTAGATGCTTCAGACCTTTTTGTTACCCTCGTAAATTGTCTATCGAAAGATTAGCAGAAAAAGTATTCTGGCTTCTTG GGCAAATGCCATTTTGCCATTGGTTGAAACTTCAAACTTATTCTGGTTATTAAGCTCAACCTTCTTTCAATTGTTTGAGCTGGTCTTGGTTGTTTACGAG TTTACGACCTTAAGCATGCCTTTTATTGAAGGCTAACATTGTTTTTATAAATCGTTTCTTCCCAACTTAAGGTCACTTTACTCCATTCTTCATGAAAGGT ACCCTTCCATATTACCTTTAAAATATTAGCTGTATGTGGAAAAGGGATTCTCCAAAGTGACCAAGATGGTAAAGTGGGAATGAAAGGTGTATTCATCCTT GATTAGCTAATGTGCATTAAGATCTCAATCTTCTTTAACTAAAGGGTGGATACACCATTACACCCCTGTTTACTTTACAATATTGTGAAAAATTGTTGCC TTGTTTTGAATGTCCTTTTCTCCCTTTTTAGATGCATTATTCTCATTTATGTTAATGGTGGATGTTTACAGACTGTTGTTTTCTGTCTTGTGGATATCTA CATCATGCTTGGGAAAGCATTCTTGCCATATCTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACAATTTATGCCAATCGAATCTCACAGGCCAGG ACAGGCAAAGCAATTGATGTCACTCATGATTAGCATCATTAGGAAGAAAATTTGTGGGTTTTGGGTGTTTGTCTTTTTCATTGTTGTGCATTTTTGTATA TTTTTTGTGTGCATGAATTTTAGTGGTGGGTTTCCATTGTCTTTTTTTTTTACCTTTCTTCTTTAAATATATAGTTTTTTTGTCTTTCCCTTTTTCTTGC CAATGTTTGTTGGGACCTAGAGAGTGCTGGTTGTGAAATACAGTATGCAAATTGTAATCTACATTGATTGTACATTATTGATTGTATTTAAAGTTTTTCA AGTCAGCCTCATTGGTTCGGTTACT BLAST |
Tissue | pods |
Gene name | LI_gene_192347; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_487970
Blastp | CLIP-associated protein from Arabidopsis with 70.62% of identity |
---|---|
Blastx | CLIP-associated protein from Arabidopsis with 70.62% of identity |
Eggnog | cytoplasmic linker associated protein(ENOG410ZMY0) |
Kegg | Link to kegg annotations (AT2G20190) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429579.1) |
Pfam | HEAT repeat (PF02985.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |