Ll_transcript_485194

• Id Trinity: TRINITY_DN52396_c0_g3_i2
• Name Transcript: Ll_transcript_485194
• Sequence: CGATCTATTGCCCCCTTGTTAAATGAGGAGTTGAAGCCAAAACTGTTGACACTTCTCCAATGTATTTTCAAATGTGTTAAGCATTCTCATGTTGCAGTTA GATTAGCTGCTGCACGCTGCATCACGTCCATGGCTAGGTCAATGACTGTAAAAGTTATGGGAGCTGTGATTGAAAATGCTATCCCTATGTTGGAAGATGC ATCATCAGTTCATGCTCGACAAGGAGCAGGCATGTTGATTAGTTTTCTTGTTCAGGGACTAGGTGTAGAGTTGGTCCCTTATGCTCCTCTATTGGTGGTT CCACTTCTAAGGTGTATGAGTGATTGTGATCGGTCTGTCAGACAGAGTGTGACCCATAGTTTTGCTGCTCTTGTACCATTACTGCCTTTAGCTCGAGGCC TTCCTCAACCAATTGGATTAGGGGAGGGTATATCTAGAAATGCAGAAGATCTGCATTTTCTGGAGCAGCTACTGGACAATTCTCATATTGAAGATTACAA GTTGTGCACTGAATTGAAAGTAACACTGAGAAGGTATCAACAGGAAGGCATAAATTGGTTAGCTTTTTTGAAACGTTTCAAGCTTCATGGAATTCTATGT GATGACATGGGGCTTGGTAAGACACTTCAAGCATCAGCAATTGTGGCCTCTGATATCGCTGAGCATCGAACTTCAATTGGGAATGAAGATCTTCTGCCAT CGTTAATTATTTGCCCATCAACATTAGTTGGGCATTGGGCCTTTGAGATAGAAAAGTATATTGATGCTTCGGTTATATCTAGTCTTCAATATGTTGGTTC TGCTCAGGAGCGAGTGTTTCTTCGAGATCATTTTTGCAAGCATAATGTGATTATAACATCATATGATGTTATCCGTAAGGATATTGATTATTTGGGACAG CTTCTATGGAAATACTGCATTTTGGATGAAGGACATATAATCAAGAATGCCAAGTCTAAAGTTACTCTTGCTGTAAAGCAGTTGAAAGCCGAACACCGTT TGATATTGAGTGGGACACCGATACAGAATAATATCATGGACTTGTGGTCTCTCTTCGATTTTCTAATGCCTGGATTTCTTGGAACTGAGAGACAGGTATA TTCTTTTTGCCCATATTATAGTGGACGTTGTTACACTAATTTAACTGCAACCCATGATTAGTATTTGCTATGATTTGGAAAATGATAGATTTCATATGCT AGGGTCTTATTGCTGCCGGGATCCTAATTATATGCATGTTGGCATTTAGCTTTATTTTGCACCTATCTTGAGACCATTTTTTTACTAACATTAACTGTTA TAATAGTGGACACATCATAATTCCTCAAAGCTTCCTGTTGAAGGAGAGAAAAAGAGAAGGATATGTTGAAAACTATGTTAATCCCACTACAGTATGGAAT GTGTATATATGTGACTGCATGATGTAAATACAAACATACAATTAACGAAAAGAAGTATAGACAATGATAATGATGCATGTTTCGAACAACTTCTAAGTTG CTCAGTGCTGTGCACTTGTCCTTACAACAACAACCAAACCTTATTTCACTAGGTGTGGTGGGCTTCATAGGTGAAACAACACCATAATGCTCTATAATGT TAATTGACAAAATGTTGATTTCCAAATCCTGAATAGTTTCACGAATGGTTTTCTTGGCCTCCCTCTGTCCTTAGAAATGGACTAACTTCCATTTGATCTA TTCTCCTTATCATGGGTTTCTACTGATCTCGTCATGTAGCCAAACCACCTAAGGCAATATTCTATTATCTTTCTACTATAGGAGCTACCCCAATTTTCAC TCTAAAGCCTTCATTCCTAATCTTATATTGTGTATTGTGCCACTCACCCAACACAAAATTGTCATCTTTGCTACATTGAGTTTATTCGCTTGTTGAAATT TTACCACCCAACATTCAGTACCATACAACATTGCAGAATCATATGATTTACTTCTCCCTCTATTTCACTTTCGTCATGTGAGGTTGACCCAATATATTTG AACCTTGAGACTTGTTGTATGGTATGGTCTCCAATTTTGACCTCTATGGTAGGATTTGTGCGCCTCTTGCTAAACTTACACTCCATATTCTCTATCACAT TGACTTATACAAAAGTCACACAATGTCTAGTGCTTTACCTGGCAAGTACCAATCCATTTTAGCCTTTTAAATTGTAGCCACTACTGTGAATAATTTAATG TTTGGCTTTAACAGTTCCAAGCCACATATGGAAAACCACTTTTAGCAGCAAGAGATCCAAAGTGCTCTGCTAAGGATGCTGAAGCGGGGGCACTTGCAAT GGAGGCATTGCATAAGCAGGTGATGCCTTTCCTCCTTCGGAGAACGAAGGATGAAGTCCTGTCCGATCTACCAGAGAAAATAATTCAGGACAGATTCTGT GATTTGAGTGCTGTACAACTTAAACTTTATGAACAGTATTCTGGTTCTCATGTTAAACAAGAAGTTTCATCTATTGTAACAACTAATGAGCCAGGTGCAG CAGAAGGAAGTAGCAGTTCAACAAAAGCGTCTTCACATGTTTTCCAGGCAATTTCATTTCTTCGGTTATCAGTTAGTTATTGTTCTATTGGTTTTTTCAT TTTTTGTATGCCCATAAATCCATTCCTTTGTCCCAGGCACTCCAATACTTGCTAAAACTGTGTAGTCATCCATTGCTTGTCACCGGGGAGAAGATTCCGG ATCCACTCTCTATCGTCCTCTCAGGATTATTTCCTCCTGGCTCTGACATTGTTTCAGAACTTCACAAACTTCACCACTCCCCAAAATTGGTTGCCCTTCA GGAGATTCTTGAAGAGTGTGGCATTGGAGTTGATGCTTCAGGTTCTGAGGGTGCTGTTGGGCAGCACAGGGTCTTAATATTTGCTCAACATAAGGCTTTT CTGGATATAATCGAAAGAGATTTATTTCAGACAAATATGAAAAATATCACATATTTGCGGCTGGATGGATCTGTTGAGCCAGAAAAGCGTTTTGATATTG TCAAAGCTTTCAATTCAGACCCTACAATTGATGCCTTACTGCTTACAACACATGTGGGTGGGCTTGGTTTGAACCTGACATCTGCAGATACCCTCGTTTT TGTGGAGCATGACTGGAATCCAATGCGAGATCATCAGGCCATGGATAGAGCACACAGGTTAGGTCAGAAAAAAGTAGTTAATGTCCACCGTTTAATAATG CGTGGTACTTTGGAAGAGAAAGTTATGAGCCTACAAAGGTTCAAAGTGTCGGTGGCTAATGCTGTGATCAATGCTGAAAATGCCAGTATGAAGACAATGA ATACAGATCAGCTGCTTGATTTATTTGCATCAGCAGAAGTCCCGAAGAAGGGAGCTTCTGTTGCAAAGAGTTCAGAGAACAACTATGATGGAGAAACAAA GTTAGTTGGCAGTGGGAAGGGGTTGAAAGCAATACTTGGGGGATTGGAGGAGCTATGGGACCAATCACAATATACAGAGGAGTACAATCTGAGTCAATTC TTAGCAAAGCTTAATGGCTAATATTCCAAATTCAATTCAGAGTGTACATATCCAATAATACATACAAATTTTGACGTTATAAAATCTCCATTTTTTTTAC ATGCCCTTTACCCTTTATTTTCTGTCATCAATTTTTGAACACTCCAATGCTTGCATCTGCCAATTTGAGTGATTGATGGAAAAAAGCAGTTCTTGGTTTG GTGGTGTAGTGATGATATGTGAATGTGAGGAGGCGATGGAGTAATCTTATTTTATTTCTGGATTTTGTATATAGTCATCATAGTCGTTGCTCATACCAAA TACCAAAACTCATCAGCCAAAAAAGGAATTAATATGCA
• Tissue: pods
• Gene name: LI_gene_192389;
• Additional information: details;

Expression of Ll_transcript_485194

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.1
• PS3: 0.2
• PW1: 0
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_485194

• Blastp: TATA-binding protein-associated factor BTAF1 from Arabidopsis with 80.12% of identity
• Blastx: TATA-binding protein-associated factor BTAF1 from Arabidopsis with 79.18% of identity
• Eggnog: excision repair cross-complementing rodent repair deficiency complementation group(ENOG410XP4Z)
• Kegg: Link to kegg annotations (AT3G54280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019412827.1)
• Pfam: SNF2 family N-terminal domain (PF00176.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;