Ll_transcript_351002

• Id Trinity: TRINITY_DN52408_c1_g2_i3
• Name Transcript: Ll_transcript_351002
• Sequence: GCTTCCTTTGGTGCATGTTACCTTCTTGATGTTCCATTGCATGCAAACAATGTTTTCACTTTTGTGGCAACGTTGCGCCTAGTTCAAGATCCAATTAGAA CCATCCCGGATGTTCTTGGTGTTGTCATTCAAGCAAAGGTTGCATTCGCCAGGATTGTGAAATTTCTTGAGGCGCCTGAATTAAACAGTGAAAATGTGAG GAAGAGGTATTTAAATGATCGTAATAGGGGCTCGATTTTAATCAATTCTGCTGACTTTTCATGGGAAGATAATGTAACAAAGCCAACTCTAAGAAACATG AATTTGGAGGTTAGGCCAGGGCAAAAGGTGGCTATTTGTGGAGAAGTTGGCTCAGGCAAATCAACCCTCTTAGCATCAATTCTCAGAGAAGTTCCTCATA CTCGCGGAACTATTGAAGTTTATGGGAAATTTGCCTATGTTTCTCAAACAGCATGGATACAGACGGGTACAATACGAGAAAATGTACTGTTTGGATCAGA TATGGATCCTCAAAGATATCAGGAAACACTTCATAGATCTTCACTAGTGAAGGACCTTGAACTATTTCCCCATGGTGACCTCACAGAAATAGGGGAGAGA GGGGTTAACTTGAGTGGAGGCCAGAAGCAACGGATTCAACTTGCTCGTGCTCTTTACCAAAATGCTGATATATATCTCTTGGATGACCCATTTAGTGCTG TTGATGCACATACAGCAACAAGTTTATTTAATGAATACATCATGGAAGGACTTGCAGGGAAGACAGTCTTGCTTGTGACACATCAAGTTGACTTCCTTCC AGCATTTGACACTGTTTTGTTGATGTCAGATGGGAAAATCCTTGAATCTGGTCCTTATGACTACCTACTGACCTCAAGCCAAGAGTTTCAGGACCTTGTC AATGCTCACAAAGAAACGGCTGGTTCTGACCGTCCTCTGGATGTTACCTCTTCTCATACGCCTCCAAATACTACCCGAGAAATTAAGAAAACATCTGTGG AGAATCAGTTTGAAGCATCACAAGGCGATAAACTAATTAAGAAAGAAGAGATAGAAAAAGGAGACCAAGGGTTGAAGCCTTATTTGCAGTATCTGAATCA GAATAGAGGATATATATACTTTGTTGTGGCTGCTCTTTCTCACCTTACATTTGTGATTGGCCAGATATTGCAAAACTTATGGATGGCAACTAATGTTGAC AATCCTCATGTCAGCTTGTTGCAGTTGATTGTAGTTTACTTGTTGATTGGATTTATTTCAACAATTTTCTTGTTGATCAGAAGTCTTGTTGCAGTTGCTT TGGGTCTTCAATCATCAAAATCGATGTTTTTACAGCTACTGAACTCCCTTTTTCGCGCACCTGTATCCTTTTATGACTCGACACCGTTAGGAAGGATACT TAGTAGGGTCTCCTCGGATTTGAGCATTGTCGATCTTGATGTCCCATTCAGCCTTGTTTTTGCTGTGGGAGCTACTGCAACTTGTTATTCTAATCTTGCA GTTTTAGCAGCCATTACATGGCAAGTCTTGTTTGTCTCTATACCAATGATTTACATTGCAATTCGCTTGCAGAGATACTACTTTGCCACCTCAAAAGAAT TGATGCGGCTGAATGGCACAACAAAGTCCCTTGTAGCTAACCATCTAGCTGAATCTGTCGCTGGAGCTATAACAATAAGGGCATTCGAGGAGGAAGATCG TTTTTTTGCGAAGAACCTTGATCTCATTGACGTCAATGCTAGTCCTTTCTTCCACAGTTTTGCAGCAAATGAGTGGTTGATGCTACGGTTAGAAACAATC AGTGCAGTTGTTTTTGCAGCCGTGGCACTTTCCATGGTGGTACTTCCACCTGGGACTTTCACCTCTGGATTTATTGGCATGGCTCTCTCTTATGGCCTTT CATTAAACACTTCCCTAGTATTTTCAATTCAAAATCAATGCACTATAACAAATCAAATAATATCAGTGGAGAGGCTAAATCAGTATATGCAAATACCAAG TGAAGCACCAGAAGTAATAGAAGGAAATCGTCCTCGTGCGAATTGGCCAGTTGCTGGAAAAGTAGAAATTCATGATTTGAAGATACGATACCGAGTTGAT GCACCCCTTGTACTCCGTGGGATCACATGCACATTTGAAGGAGGGCACAAGATTGGTATTGTTGGCAGAACAGGTAGCGGAAAGTCCACTCTTATAGGTG CTTTATTCCGTCTAGTGGAGCCAGCTGGTGGGAAAATCATAGTTGATGGCATCGACATTGCTTCTATTGGACTTCATGATTTGAGGTCACACTTTGGTAT CATACCTCAGGATCCTACTCTTTTTAATGGCACAGTCAGATACAATATGGACCCGTTATCTCAACACTCGGATCAGGATATATGGGAGGTTCTTGCGAAG TGTCAGTTGCGAGAGGTTGTCCGAGAGAAAGAAGACGGATTAGACTCCTCAGTTGTTGAAGCTGGGGCAAACTGGAGCATGGGACAGCGACAATTATTCT GTTTGGGACGCGCTCTGTTGCGCAAAAGTCGAGTATTGGTGCTTGACGAAGCAACTGCATCAATTGATAATGCAACTGATCTGATTCTGCAGAAAACAAT TAGGACTGAGTTTGCAGATTGTACTGTAATCACAGTAGCCCACAGGATACCAACTGTGATGGATTGCACCAAGGTTGCTGCCATCAGTGATGGGGAACTG GTAGAGTATGATGAGCCAGTGAATTTGATGAAGATGGAAGGATCCTTATTTGGACAGCTTGTGAAAGAGTACTGGTCTCATTTTCAGTCTGCAGAATCAC ACTGAAGCTATAAACTTCTTGCATGTGTCTCTTTCTATGGTATTATTATGAGCAAGATTTCAATAAAGATAACTAGAAGTGAAATGTTAAATGTATTATT ATTCATATGTATAAGGATAGCAATACAATTGGTTCATGTTTAGTTGATATATAAAACATTACAAGAATGTGATGATTGTATTATCTATTAAACAAATGAT AGATTTATGGGGATATTATTTTCATGAGTGTTTTTTATAAATCTTCTGTCAAACATTGGAATTTTATATCAACAGGTGAGATTCTGTAACATG
• Tissue: pods
• Gene name: LI_gene_192491;
• Additional information: details;

Expression of Ll_transcript_351002

FPKM

• PAB: 0.8
• PNAB: 1.4
• PS1: 3.2
• PS2: 0.5
• PS3: 1.7
• PW1: 1
• PW2: 0.5
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_351002

• Blastp: ABC transporter C family member 10 from Arabidopsis with 71.66% of identity
• Blastx: ABC transporter C family member 10 from Arabidopsis with 71.66% of identity
• Eggnog: (ABC) transporter(COG1132)
• Kegg: Link to kegg annotations (AT3G59140)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442089.1)
• Pfam: ABC transporter (PF00005.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;