Ll_transcript_349389

• Id Trinity: TRINITY_DN52410_c0_g2_i13
• Name Transcript: Ll_transcript_349389
• Sequence: ATTTTCTTACATGCTAGGAAAGAACCCTAACGCCTAGGGTTTATAGTTCCTCTTTGTTACTCTGTGCTCGAATGTTAAATTGGAAAAAACTTCTCTAAAA CCCTAACCCTAACCCTAATTCACACACTCCACCATGTATCTCTACAATCTCACGCTCCAACAACCCACCGGCATCATCTGCGCCATCAACGGCAGCTTCT CCGGCGGCAAGTCCCAAGAAATCGTCGTCGCCAGAGGCAAAGTACTCGATCTCCTCCGCCCTGATGACAATGGCCGCATCCAAACCATTCTCTCCGTCGA AATCTTCGGTGCTATCAGGTCCTTAGCTCAATTCCGTCTCACCGGTGCTCAGAAAGATTACATCGTTGTAGGTTCAGATTCCGGTCGCATTGTAATCCTC GATTACAATAAGGAGAAGAATGTGTTTGATAAAATTCATCAAGAAACTTTTGGTAAATCGGGTTGTCGCCGCATTGTTCCGGGTCAGTATCTTGCTATAG ATCCAAAGGGTAGGGCTGTTATGATTGGTGCTTGTGAAAAACAGAAGCTTGTTTATGTTTTGAATAGAGATACTGCTGCTAGGTTAACTATTTCTTCGCC TTTAGAGGCTCACAAGTCTCACACTTTAGTGTATTCCATTTGTGGGGTTGATTGTGGTTTTGAGAATCCTATTTTTGCTGCTATTGAGTTGGATTACTCT GAGGCCGATTTGGATTCCACCGGTCAGGCTGCTTCCGAAGCTCAGAAGCATTTGACTTTTTATGAGCTTGATTTAGGACTCAATCACGTGTCTAGGAAGT GGTCTGAGCAGGTTGATAATGGTGCCAATTTGTTGGTCACTGTTCCCGGTGGTGGCGATGGGCCGAGTGGTGTGCTTGTTTGTGCTGAGAATTTTGTTAT TTATAAGAATCAGGGACATCAGGAAGTTAGGGCTGTGATTCCTCGGCGTGCTGATTTGCCTATAGAGCGTGGTGTTCTTATTGTCTCGGCAGCTATGCAT AAGTTGAAGTCCATGTTTTTCTTCCTTCTTCAGACTGAGTATGGAGATATTTTTAAGGTGACCTTGGAGCATGATGGTGACCGTGTCTCGGAGTTAAAGA TTAAGTATTTTGATACTATTCCTGTTACAGCGTCAATGTGTGTGCTCAAGTCGGGATTCTTGTTTGCAGCATCAGAGTTTGGCAATCATGCTCTGTATCA GTTTAAGGCAATTGGGGATGATGATGATGTGGAGGTGTCATCAGCTACTTTGGAGGAAACACGGGATGGTTTTAAGCCAGTATATTTCAGGCCGAGAAGA CTAAAAAATCTTGTCAGGATTGATCAGGTTGAGAGTTTAATGCCGATAATGGATATGAAGGTCAGTAATCTCTTTGAAGAGGAAACCCCTCAGATTTTTA CTCTCTGTGGGCGTGGTCCTCGTTCATCTTTGAGGATTCTGAGAACTGGTTTAGCAGTTAGTGAGATGGCAGTATCGAGGCTTCCTGGTATACCTAGTGC TGTTTGGACTGTGAAGAAGAATGTTATTGATGAGTTTGATGCTTATATCGTTGTGTCATTCACAAATGCTACGCTTGTGCTTTCCATTGGTGAGACAGTT GAAGAAGTTAGTGACAGTGGGTTTCTTGACACCACACCCTCCCTTGCTGTTTCCTTGATAGGTGATGATTCTCTCATGCAGGTTCACCCTAATGGTATTA GACACATTAGGGAGGATGGGCGTATTAATGAGTGGAGAACTCCTGGAAAGAGGACAATTGCCAAAGTTGGATATAATAGACTTCAGGTTGTTATTGCACT GAGTGGAGGGGAGCTTATATATTTTGAAGTGGATGTTACTGGTCAGTTGATGGAGGTCGAAAAGCATGAAATGTCTGGAGATGTTGCTTGTTTGGACATT GCTCCAGTACCCGAAGGCAGACAAAGATCCCGTTTTCTGGCAGTAGGTTCATTTGACAAGACTATCCGCATCTTATCACTGGACCCTGATGATTGTATGC AGGCTCTTAGTGTTCAAAGTGTTTCTTCAGCTCCAGAATCTCTTCTTTTTCTTGAAGTTCAAGCTTCCGTTGGCGGCGAGGATGGTGCAGATCATCCTGC TAGCCTTTTCTTGAATGCTGGTTTGCAGAATGGTGTCTTGTTTAGAACCGTGGTGGATATGGTTACAGGTCAGCTTTCTGATTCTCGTTCCCGATTCTTA GGATTGAGAGCCCCAAAGTTGTTTCCTATTATTGTAAGAGGCAAGCGTGCCATGCTTTGCCTGTCAAGTCGACCATGGCTTGGTTATATTCACCAGGGAC ATTTCCTATTAACACCTCTTTCATATGAAACCCTTGAATACGCGGCTTCATTTTCGTCTGACCAATGTGTGGAAGGTGTAGTTTCTGTTGCTGGTGAGGC ATTGAGGATTTTTACGGTTGAAAGATTAGGAGAAACATTTAACGAGACTGTAATTCCATTAAGATATACACCAAGAAAGTTTGTGCTGCATCCCAAACGG AAACTTTTGGTGATAGTTGAGAGTGATCAAGGAGCATTAACTGCAGAGGAGCGTGAATCTGCAAGAAAAGAGTGTTTTGAGGCTACTCAGGCAGGGGAAA ATGGGACTGGAAGTGACCCAATGGAGAATGGTGGCGAGGATGAGGATAAAGATGATGCACTCTCCGATGAACATTATGGTTATCCAAAAACTGAATCAGA TAAATGGGTTTCCTGCATCAGAGTTCTTGATCCAAAGACAGGAAACACAACATGTCTTCTGGAGCTTCAGGAGAATGAGGCTGCATTCAGTGTATGCACA GTAAATTTCCATGATAAGGAATATGGAACCCTGTTAGCTGTTGGCACAGCAAAGGGACTGCAATTTTTGCCCAGAAGGACTTTAACTGCTGGATATATTC ATATATATAGGTTTGTAGAGGATGGAAGATCTCTTGAACTTCTTCACAAAACTCAGGTCGAAGGTGTCCCTCTTGCTCTATGTCAGTTTCAAGGAAGATT ACTTGCGGGAATAGGACCTGTGCTCAGGCTATATGATTTGGGGAAAAGACGATTGTTAAGGAAATGTGAGAATAAGCTATTCCCCAACACAATTGTCTCT ATTCATGCATATCGTGATCGTATTTATGTTGGCGACATGCAAGAGTCTTTCCATTACTGCAAGTATAGGCGGGATGAAAACCAGCTTTACATTTTTGCGG ATGATTGTGTTCCAAGATGGCTTACTGCATCATACCACATAGATTTTGACACCATGGCAGGTGCAGACAAGTTTGGGAATGTCTATTTTGTGCGGTTGCC ACAGGATGTTTCAGATGAAATAGAAGAAGATCCAACTGGTGGGAGGATCAAGTGGGAGCAGGGAAAGCTGAACGGAGCTCCCAATAAGGTGGAAGAAATT GTGCAATTTCATGTTGGTGATCTGATCACGTCCTTGCAAAAGGCATCTCTTATACCAGGTGGTGGAGAGTGCATTTTATATGGAACAACTATGGGAAGTA TTGGGGCATTGCATGCTTTTACGTCACGAGATGATGTCGATTTCTTCTCTCATTTGGAGATGCATTTGAGGCAGGATCATCCACCTTTGTGTGGAAGAGA CCACATGGCTTATAGATCTGCTTATTTTCCTGTCAAGGATGTGATTGATGGAGATCTGTGTGAGCAATACCCAACATTGCCAATGGATTTGCAGCGAAAA ATTGCTGATGAATTGGACAGAACCCCTGGAGAAATACTAAAGAAACTTGAGGAAGTACGAAACAAAATTATTTGAGAGATGGTCTTCAGAAAGGTCCCAG AGGTAATAGATCATTTGCACTTGTAGTAAGGTCACTAACTAAGGGTAGAAAGCTTGTTCTTCCATTTCTTGCAAAAGGGAGGAGTAGAGAGTGGATGTTT GTACTGTATTTTTGGAATGAAATCTAAGTTGGCAATCAATGTTGTGTAATTATTGATAACTGAATTATATCACGCTCATTGTGGATGTGATAATAGCAAT GCTTTTTTTTCTTCATATTACAGAGTTTTCATTTTTCACTTTTTGTTGATAGTGCTGAATATCCCAGTTCAAGTGGTACCCTTCCAAAATAGATAATAGT GCTTAAAACTTAGCCTTTTACCTTTCAATAAAAGTAGACTCCGTTG
• Tissue: pods
• Gene name: LI_gene_192500;
• Additional information: details;

Expression of Ll_transcript_349389

FPKM

• PAB: 0.2
• PNAB: 2.6
• PS1: 2.4
• PS2: 1.7
• PS3: 2
• PW1: 1.5
• PW2: 1.4
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349389

• Blastp: Spliceosome-associated protein 130 B from Arabidopsis with 86.57% of identity
• Blastx: Spliceosome-associated protein 130 B from Arabidopsis with 86.57% of identity
• Eggnog: Splicing factor 3b subunit(ENOG410XPFQ)
• Kegg: Link to kegg annotations (AT3G55200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427968.1)
• Pfam: Mono-functional DNA-alkylating methyl methanesulfonate N-term (PF10433.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;