Ll_transcript_350188

• Id Trinity: TRINITY_DN52412_c2_g1_i11
• Name Transcript: Ll_transcript_350188
• Sequence: ATCACCCATTCCTGTATCATGTCATTAGTGATAATATTGTTGGATTCGTTTGTGTAGTACTTAATTATGAAACTTGTGGAATTTGTATTGGTGTTGAAAT TTTATTGGGAGTTTGGTTGATCAACTAGTATGATCAAATTAAATTATTTTGCAGGGTTTGGTTGAAGCTGACTGGAACTTGGCCACTATTGTTTTTAAAG ACCATTAATGTTTTAGTAAATTTTGTCCATGTTCTAGTTAATAATGAGCTTATCCAAGTTAGGATCCCAAACAGACACAAGGCTTAGTTCCTCGGACAAG GCAACCACTTTGAATCCAAATGCAGCAGAGTTTGTTCCTTTTGCCCTCAGATCAACTCCATCGAGAAGTACTGGATCTGTAGATCCAACAGCTAAGTTCA TTACTTCTGGGTCCCTTGGTAAAGCAGTTTTAGATCGATCAGGATCATCTATTTCGAATAACTCTGATGATGAGGCCCACCGGTACTGGCATTGTCAGCT CCCTGATGATATCACCCCTGACTTCAAGGCCATGGAAGAAGATGAGTCCCAAGGTCTTAACAATCTCTCTTTGGCTGGCTTATCGATACATGATGATGAT GAATCTTCAAGGTTTCCTTCTATGGGAAGTAGATTCATATTAAGTGAGAAGCAGCACCTCAATGAAAATAATATTGCTGCTGATAAATTTAGGTTTTCAA ATTCAAACTACAGGGTGGAACCATCTTCCGCAAGCCTTTTGAGCCCGTTAGCAAAGCCTTGGGATAGGCAAATTGGGAATGCCAACCAGCATGTTATTGG TGGTCGAGAGGGACTTATTTATGATGACAACTCTAAACATGGATTCTTAAATGATATTTTGTCTGATAATGTAATTGTTGATGATACTAGTGCGAACCCT TTGGAGTTTTTAGCTTCTCTTTTCCCTGGCTTTGCGTCAGAAAGCCTGGCCGAAGTTTACTTTGCCAATGGATGTGATTTACATCTGACCATTGATATGC TCACTCAGTTAGAGGTAAGTCGATCTTCACTTAGTAACTGACTTGTGGTTAAACTATGGTTCTTTTTTAAGCTTGTTATGCTTTGGTAGTTGGTAAAATA TTAAATCTGAAGGGATTGGTGCTAAATGTGTAGAGCAATACCTGTGCCTTGTTTTTGGCAGGGAAGAGCTGGTGCAATTATAAAGTTGTAAGGCGACTCC GGTTTGTAGTTACTGATTCCTGAATCCTGACACCCCATGTGATTCATGCTATGAAGGAGTTATTGGCATTTTATTAGCATTATTTCGATATATAATCATT TATTGGTATAAGATATAGTAATACAACCATGTCTCTAGATTGTCTTTCATTGTGTTGTTGTCATTGTGACTTGTCATGAACGCTACTCATTTCTTTGGCG TCCTTCTTAATGAAGGAATTATATGTTGATCACCTCCATTTTTTCCCTTCCAAACTTGTAGCTTCAAGTTGATGATAGCTTCAATCAGAATCTGAGTTCA AAGGCCTTGTCAGCTCCCAATCTAACGACAATGGACTTTCCTGCACTTACCTCACCAAATGGTCAGATCACTTATGCAAAATATGGTATGGATAATGCCC AACAAAGTGGCAATCATTACCTATCATCTGGAAAAGACATGCTCATGTTCAGAACTAGCTCTTCAATTCCATCTAGAGGTGCTATCGACTTTGCTTCAGC TGTCAGGAAATTAGCTTCTCAGGATTCTGGTATATGGAAGTATGATAGAAATGGTTCTTGTGATGCTTCAACTGGCTCAAGTAGAAGTTTAAATGTTTTG GCTAGTGCCTACAATGGTGCACAGGGGAGGGCCAACTTTGGTGATAAGTCACAGAACCGTGGTTCTGCTCGGACAGCTCCTGTTTGGCTTGAAACCGGTG ATGCTGTTGCAAATATGTATTCTGAGCTGCGGGAAGAGGCTCGTGATCATGCACGCTTACGAAATGCATATTTTGAGCAGGCACGTCAAGCCTACCTTAT CGGCAATAAGGCCCTAGCAAAAGAATTAAGTGCTAAGGGGCAAGCACACAACACACATATGAAAGCAGCTCATGGAAAAGCTCAAGAATCTATTTACCGT CAAAGGAACCCTGCTGGTTCCCAGATGCTGCAGGTCAATGGAAGAGGGCATGAGAGGATGATAGACCTGCATGGGCTGCATGTAAGTGAAGCCCTTCACG TGCTGAAACATGAATTGAGTGTGTTAAGAAGCACTGCCAGAGCCACCGAGCAGCGTTTGCAGGTTTATATCTGCGTTGGTACCGGTCACCATACCAGGGG TTTGCGCACTCCTGCAAGACTTCCAATAACTGTACAGCGTTATCTACTTGAAGAAGAGGGCCTTGACTTCACAGAACCGCAGCCGGGTCTGCTTGGTGTT GTGATATATTGAGCGAAGGATGTATACAAGTTTTTGACACAGTAAAAATCCAGGAACACAGAGATTGTAGTCATTCTTGTATCTGTATATGGGATGTCCA AGCATGAAGAAATGTTAAAAAATGAAGAAGTTTGTAGATGGAAAGAGAATGGTTGTAGCAGAATTTTACCATTGTGGTTTAACTTGGACTCCACTTGTTC ATTTTGTATCCTAATTTTCTTCTTTTGATTCAGATGCTATTCAGTTACATGATAGAGCAATCACAACACATTTTTATGTAAAGGTCATTTACTCAAAAAA ATTAATTGAGGTGCTAACCTTATCAAAATTTGTAATGAGTCATTCATACACATTTTTTCAGGTCCTAGATTGTGTGGTTTAGGTCCCAAATACATCTATA TCATTGGTTATACATATATGCATGATTTCAAAGGAAAAATAGTTACATGTACTCAAACCACACAATAATTTTTACACTAAACCTGATTATTCC
• Tissue: pods
• Gene name: LI_gene_192520;
• Additional information: details;

Expression of Ll_transcript_350188

FPKM

• PAB: 7.5
• PNAB: 2.9
• PS1: 6
• PS2: 4.1
• PS3: 5.4
• PW1: 3.4
• PW2: 6.8
• PW3: 10.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_350188

• Blastp: Polyadenylate-binding protein-interacting protein 7 from Arabidopsis with 70.41% of identity
• Blastx: Polyadenylate-binding protein-interacting protein 7 from Arabidopsis with 67.78% of identity
• Eggnog: smr domain containing protein(ENOG4111EZQ)
• Kegg: Link to kegg annotations (AT2G26280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448014.1)
• Pfam: Domain of unknown function (DUF1771) (PF08590.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;