Ll_transcript_350196

• Id Trinity: TRINITY_DN52412_c2_g1_i17
• Name Transcript: Ll_transcript_350196
• Sequence: GGAATGAAAGGTAAATGATAACTCATATATGCATATATTTTATTTTCTCTAAAAAAAAAAAGGGAGAAAAGAGAAAAATAATAATAATGAAAGAGAGAAA TGAAGGAAGAAAAAGCTGATAACAATTATAAGGAGGAGTTGAATTCCAACTTCAAATTCTGATAATTAAAAAAATAAAAAATACAAAGTTGCTTCACTTA TCTGATTTCATGTAACCTTCATCCATGGAACCCATTGATTTGTTTCGTAAAGGGTTTGGCTGAAGCTGACTGGAATTTATCGTCTATTGTTTTTAAAGAC CATTTATATTTTCGTAAAGTTTGTCTATATTCTAGTTAATGATGAGCTTATTCAAGACAGGATCCCTAACAGACACAAAGCTTAACTCCCCGGACAAGGC AACCACTTTGAATCCAAATGCAGCAGAGTTTGTTCCTTTTTCCCTCAGATCATCTCCATCGGGAAGTACTGGATCAGTAGATGCAACAGCCAGGCTCACT ACTCCTGGATCACTTGTGAAAGCAGTTTTAGATCGATCAGGATCATCTGTTTCAAATAATTCTGATGATGAGGCCCACCAGTTCTGGCGCTGTCAGCTCC CTGATGATATCACTCCCGACTTCAAGGTCATGGGAGATGAGTCCCAAGATCTTAACAATCTCTCTTTCGCGGCCTTATCTATACACGATGATGGTGATGA GTCTTCTAAGGGAAGTAGATTCATATTAAATGAGGAGCACCTTAATGGAAATACCATTGCTGATGATAAATTTCTATTTTCGAATTCAACCCACGTGAAG GAACCATCTTCAGCAAGCCTTTTGAGCCCGTTGGCAAAGCCTTGGGATAAGCAAATTGGAAATACCAACCACCATGTTAATGGTAGTCAAGAGGCACTTA TTTACGATGACAACTCTAGACATGGATTCTTAAATGATATTTTGTCTGATAATGGGAATGTTAATGATGCTAGTTTGAACCCTTTGGAGTTTTTAGCTTC TCTTTTCCCTGGCTTTGCGTCAGAAAGCCTGGCCGAAGTTTACTTTGCCAATGGATGTGATTTACATCTGACCATTGATATGCTCACTCAGTTAGAGCTT CAAGTTGATGATAGCTTCAATCAGAATCTAAATTCAAAGGCTTTGTCAGCTCCTAATCTCACTCCAATGGACTTTCCAGCACTTACCTCACCAAATGGTC AAACTACTTCTGCAAAATATGCTACGGGTAATGCCCAACAAAGTGGCAGTCCTTACCTATCATCCGGCAAAGACATGCTCATGTTCAGAACTAGCTCTTC AAATTCATCTAGAGGTGCTATCGACTTTGCTTCAGCTGTCAGGAAATTAGCTTCTCAGGATTCTGGTATATGGAAGTACGATAGAAATGGTTCTGGTGAT GCATCCACTGGCTCGAGTAGGAGTTTAAATGTTTTGGCTAGTGCATACAATGGTGGACAGGGGAGTGCAAACTTTGGTGATAGGTCACAGAACCGTGGTT CTGCTCGGACAGTTCCTATTTGGCTTGAAACCGGTGATGCAGTTGCAAATATGTATTCTGATCTGCGGGAAGAGGCTCGTGATCATGCACGCTTACGAAA TGCATATTTTGAGCAGGCACGTCAAGCCTACCTTATCGGCAATAAGGCCCTAGCAAAAGAATTAAGTGCTAAGGGGCAAGCACACAACACACATATGAAA GCAGCTCATGGAAA
• Tissue: pods
• Gene name: LI_gene_192520;
• Additional information: details;

Expression of Ll_transcript_350196

FPKM

• PAB: 3.6
• PNAB: 3.9
• PS1: 4
• PS2: 2.4
• PS3: 3.8
• PW1: 5.8
• PW2: 5.6
• PW3: 3.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_350196

• Blastp: Polyadenylate-binding protein-interacting protein 7 from Arabidopsis with 53.72% of identity
• Blastx: Polyadenylate-binding protein-interacting protein 7 from Arabidopsis with 54.42% of identity
• Eggnog: smr domain containing protein(ENOG4111EZQ)
• Kegg: Link to kegg annotations (AT2G26280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457893.1)
• Pfam: Ataxin-2 C-terminal region (PF07145.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;