Ll_transcript_350186

• Id Trinity: TRINITY_DN52412_c2_g1_i9
• Name Transcript: Ll_transcript_350186
• Sequence: GTGAAATGTAGTGGCCAAAGTCTTGTTTAGTATTTTGTGGTGCTAATGTTCATTCGTATTGGCTAAGAGTTTTTCAAACACAAAATTAAAATTACCAAAT AATATTAATATTATTTTGAGGAACATAAGAGAGAAGGAACAAACCCTCATAATCTAAATCATACTCCTCATACTTACATTCAAACCTCAATTTTCAGCTC CACGTTTTCTCTCTATCTCGTTTTTCTTCGGATTTCATTTTCCCATGGATCTCCTTAATTTTTTGAGCAAAGTCTGGTTGATCAATGAGCAGGATCAAAT TGGGTTTGGTTGAGTCTGACTGGGAACGTGCTGTTATTGTTTATTGAGCATATCTATGTTGTAGTTATTTTGTCCGTACTGTAGTTAATGATGAACTTAT CGAAGAAAGGACCTCACACCGATACAAAACTAGGCATTCCAAACAAGGCAACCACTTTGAATCCAAATGCAGCTGAGTTTATTCCCTTTTCGCTCCGATC ATCGCTGTCTAGAACTACTAGCTCAGTTGATTCAACAGCCAGGGGAGCTCTTGGGAAAGCTGTTGTAGATCGAACAGAATCATCCATTTCAAATAATTCT GATGATGAAGTGCACCAATACTGGCGATGTCAGCTCCCTGATGATATAACCCCTGATTTCAAGTTCACAGGAGAAGAGGATCCCCAGGGTCTGAATGACC TCTCTTTAGCACGCTTATCCATACACAGCGACAATGAAGCCTCGGTGTTTCCTTCTTCTAAAGGGAGTAGATATATATTAAATGAGCATGATGAATTATC TCAACAGCTCATTAACGACAGTAATTTTGCAGATAAATTACGGTTTTCCAATTCAAGCTACAGGGAGAACCTGTCTTCAACAAACTTCCTTAGCACTTCA GCAAAGCCATGGGATATGCCAATAGGGAGTACCGACCACCATGTTAGCAGTGGTCAAGAGGGGCTTACTTATGATGACTACTCTGGACAGGGATTCTCAA ATGACATTTTGGTTGAGAATTCAATTATAGATGATACTGGTTTGAATCCTTTGGAGTTTTTAGCTTCTCTATTCCCTGGTTTTGCAGCTGAAAGCATAAT AGAAGTTTACTATGCTAATGGATGTGATTTACATCTGACAACTGAGATACTCAATCAGTTAGAGCTTCAAGTTGACGGTAATTTCAACCAGAATCTGAAT TCCAAGACTTTGTCAGCTCCCGATCTCAGTGCAATGGACTTTCCTGCACTTACTTCACCAGATGGCCAGACTGCTTCTGTAAGATTTGCTGTAGATAGTG TTCAACAAAGTGGCAATCCTTACCGATCGCCTGACAAAGACATGCTTTTTTCCAAATCTAGCTCTACAGTTCCATCTAGAGGTGCTGTTGACTTTGCTTC AGCTGTTGAGAAGCTGGCTACTCAGGATTCTGGTATTTGGAAGTATGATAAAAATGGCTTTGGTGATGTTGCCATTGGCTCAAGTAGGAGCTCTCATGTT CTGGCCAGTGGCTACTATGGTGGACATGGGAGAGCCGACTTTGGTGATAGGTTACAGAGCCGTGGCTCAGCTCGGGCAGCTCCTGTTTGGCTTGAAACCG GTGACACCGTTGCAAATATGTATTCAGAGATGCGGGAGGAGGCTCGTGATCACGCACGCTTATGTAATGCATATTTTGAGCAGGCGCAGCAAGCTTATCT TATTGGCAATAAGGACCTAGCAGATGATCTAAGTGTTAAAGGGCAACTGCACAGCATGCATATGAAAGCAGCTCATGGAAAAGCTCATGAATCTATTTAC CGCCAGAGAAACCCAGTTGCTCCAGATATGCAGGGAAATGAAAGGGAACACGAGAGGATGATAGATCTACATGGATTACATGCAAATGAAGCGATTCATG TACTTAAACATGAATTAAGTGTGCTGAAAAGCAATGCCAGAGCCGCGGAGCAATTTTTACAAGTTTATATTTTTGTTGGCATAGGTCAACATACAAGGGG TTCTCGCATTCCTGCTAGACTTCCAATAGTTGTACAGCGATTTCTACTCGAAGAGGGCCATGACTTCACAGAACCTCAGCCAGGCGTACTTCGTATTGTG ATATACTGAGCCATGTATAATGTGTACAAGTTTTTGACACAGTTAAAAGTCACATGTAGACATTGTAGTCATTCTTGTATCTCTGTATATGAGAAGTAAA GGCACTATCCGAAAAGAACAAAAAAGGGTTAGGGGAGAAAAAGAAAAGAAAGAGAAGGGTTGTAGTAAAATTGTATCATTAAGGTTTAACAGCAGCAGCA GATTGTTACATTAGTCAGCAGGATATCACATCAGCCCATGTTATTATGGGGTCATTTTACGTTTGTTAATCTTGTACTCCAATTTTTACTTTGTTAAATT CCTTTTTCTCTTGATTCAGAGGTAACTAATTCAATTACATCTTTAGCAACCACTTACATTTTCGATAGTAC
• Tissue: pods
• Gene name: LI_gene_192520;
• Additional information: details;

Expression of Ll_transcript_350186

FPKM

• PAB: 17.6
• PNAB: 18.7
• PS1: 18.4
• PS2: 10.5
• PS3: 17.8
• PW1: 12.8
• PW2: 16.7
• PW3: 14.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_350186

• Blastp: Polyadenylate-binding protein-interacting protein 7 from Arabidopsis with 54.92% of identity
• Blastx: Polyadenylate-binding protein-interacting protein 7 from Arabidopsis with 55.32% of identity
• Eggnog: smr domain containing protein(ENOG4111EZQ)
• Kegg: Link to kegg annotations (AT2G26280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414983.1)
• Pfam: Domain of unknown function (DUF1771) (PF08590.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;