Id Trinity | TRINITY_DN52425_c1_g1_i3 |
---|---|
Name Transcript | Ll_transcript_348521 |
Sequence | TGTAGTGTCATATAGAGATTAGAGAATGAAGAAAACCGAGTAGTTCCTAATCATCAAGGAACGTGTAAAGGAAAGGCAGAGAGGTGAGAACAAAGACAAC CAGAAACACAATCGGAAAGGCAAACTGAAAGCCAAACAGAAAGGGCTAATTGAACTATGTATTCCTTAATCTGTTCTTTATCACATGTGAATGTCATAAT GTTAAGGTCCTAAAATAAAGTGTTTTTATCTCACAATTATCTCACTCAACCAACTTCAAACTTTCAAGTCCAAGCATATAAAATTTCAATTAGCTTATAA GTTTTCAATAATTTATCATCTATCACACTATTTCATATATACCATGTCTAATATCTATGCATTGTCATTATAAAAATTTATTCACTATCGTTGCATCATT CATAATTTATTTGGATTATTTTTTAAAAAATGAATAGTAACTAAATATGAATGATATATATATATATATTTCTCCTTAGTTAATCAAAATAATACTATCA CAATATTATTCCATTAACGTTTCTTCATTTCAAATATTTTCGTAGATCCAAACATAGTAAACATACAATCTTAACAGGCTATTCCGGTCACCACTCCACC ACTTTCCCTTTTATCTCTCATCTTTCTAGAAAGTGAACCAAACCAGACACCAAACTCACCGAGTCAACTCGCTCTTCACAAAACCCTTAAAAACCCTGCA TTTCTCAAATTTCATTCATAACGATGTATTCCCGTTTTGCCCCTACCACCCCTCTCTATATTACATTCCCTGCCACTGCTCTAAAACCCTTAATCGGTGC TAATCATAACTTAGCTCGATTCTGTTCTCGTTAGACCCAAAAAAATCACCATTTTTATTTTCATTTTTTTTCTTACTATTTTATTTAACTGAAAATAGAA GAAAAAGAAAAGGTGCAGAATCTGTATAATGGAACCTGCCACAGGGAAGCATAGCTCTCTCAGAAATGTTCTGATACGGTTACTTCTTCTCGCTGTTTTC ATCTTCGGTGTTCGTTTCGCTTACGTCATCACCGTCGCCGGAACTTCCTGCGCCGTCGCCGACTTCTGCTTCTTCTCGCTGCCGGAAACTCTTAACCTCG TCTTGTCCGGAGTTGTCTCCGGTACCGGGCCTGTCGCCGTTGAAAGGTCCGTTTCCGGCGGTTCCGTGTTTCCGGAGAATCAAACCAGAAAGGAGTGGGT TAACGGCGTTAGTTTCTTCTCGTCGGTGTTTCGGGAGCTAGTTTCCGACGGTTATCTCTCTCCGGCGTCGAAATCGCTTTGCGTGGAAAGGCCGACCGGT CACGGTGTGTTGGCGTTGAAGGAGATCGGTGTTGTTGATGCTGTAGGAATCTCGAAGAAAGCGTTGAAGGCTCTGGTGAAACCTGGGGAAGGACAGTGGA TTCCGTTCGCCGGAGAAACCTTCGATTTCGTGTTCTCCGGGGACTTCATGCTGGAGGAGTTGGTGAGGCCAACGGAATTTGCTTCGGAGATTGCTCGGAC ACTGAAACCCGAAGGGTTCGCAGTGTTCCATTTAGCAAACCCTAGAGATACGTATAGCTTCAATTCATTCCTTAATTTGTTCAATTATTGTTTCAAATTA GTGAAATCGCTTGATATAGATGGATTTGATTCTTCAATGCCGATTATACGTGAAATTGTTTTGAAAAAGGAGTGTGGTAGTGTTAATGATCAATTTCATA GTGTTGTGAATTTTGAGAAACTTGATAGTGATTACAACAATGGTTATAGTGATGGTAATTACAATGAAAAGTGTTCTATACCGAGGTATAAGAAAGATTT GGTTAGGAATGCCGAGCCACTGATTTTAGAGGAACCGTTGAAGCCATGGCTTACTTTGAAAAGGAATGTTAAGAATATAAAGTACCTTCCTTCAATGGTT GATATAAGCTTTAAGAATAGGTATTTGTATGTTGATGTTGGAGCTAGAAGTTATGGTTCTAGTATTGGATCTTGGTTTAGGAAACAATACCCTAAGCAGA ACAAGACCTTTCATGTGTATGCAATTGAAGCCGATAAGACTTTTCATCAAGAGTATGGGTTGAAGAAAGGGGTCACTTTGGTTCCTTATGCTGCTTGGGT GAAGAACGAGACCTTGATGTTCGAGATTCATCGTGATCCTGGGGAGCATGTTGAGGTTAAAGGTAGAGGGATGGGTAGGATTCAACCTCTGCAGTCCTCT GCTGGGGGTTTTGATGGTGAGGTTGAGAAGATACAAGGGTTTGATTTTGCTGCCTGGTTGAAGAGCATGGTTTCGAAAAATGATTTTGTTGTGATGAAAA TGGATGTGGAAGGTACTGAGTTTGATTTGATTCCGAGATTGTTCGAAACCGGGGCGATATGTTTGGTAGACGAGATTTTCCTTGAATGCCATTATAATAG GTGGCAGAGGTGCTGTCCTGGGAAGAGGAGTACAAAGTATGAAAAAACATATCAGCAATGCTTGGAGCTTTTCAATTCTCTTAGACAAAGTGGAGTTCTT GTTCACCAATGGTTTTGATTGGAAAAAATCCCATACTTTTCCTGTGATATCCTTAATTTGCATGTTTAACCTTCAACATGTGTTTTCTTCATAGTTTTTT GGAACTTTTTACACCAGAAAATAGAGAAGATTGTTGTTGTGTTTCAAATTTCTTTTCATGTAATAGCTGCAACTGAAAATGAAATCATTACTTTAAACTA ATGATATTTGTTTCACTTGTATAGTTATAGAAATATATAACTGCATACTATAATCTCTTATTTTATCTCTGAAAGAATTTGATTGTTTTTTACTTGTCAG TGCTAATTAGTTGGTTTGAATCTACAGAAACTAAATTGATTTTAATCTACAGTTATTTTGGTTGATGAACTTTTTGACATTTGAGACTGAGAGTGACAGT TTTCTTTATGTTCTACTAGTCTTCTGGGTAGAATAGTAGCTTTTATTGCTATAATTGGATAATATTGTTAAATTATGAGACTTCAAGTCATTGTCCTAGT TCCTATATGCCTATTGCAGTTTGGGGAGAATTCAATCTGAAAACATTAAAGTGATCCTTTGTACTATCTAGAACCAAATATGATCAATTGTACTTTGTTT ATCAATAAGTTGTGTCCTTTGTTTTCTTGGGTGGTTCTCACAGTTTATGTAATCTGTACTGTTAATTTCGGGATTATTTTATTTGTTGATAATTGTCTTA GAGGTCTGGCAATAGGTTTTTCGATTCTGAGAGTAAAACTATGTACATCTGTCGTATTAAAATCTATGAAGTGGGAGCCTTGTGCAATGTGTTATAAAAT ATAATATGACATATAAAATGATATATGTATATATGATAAAAAAATAGATAATCAATGAAACTTTCAACCAAAATAGTGTCACTACTCTGTATACATTTGA ATTGAAACACATATAAACATGATGAGTGAGTGATCATAAGACGAGTCATGATTGGTCACTACCCGACCCTAATATTGACAAGTCTAATTTTTAAATCCGA ACCTGACCCTATGACCGATGAGACCCGACTCTATTTGGATTCGATCATGATCGGGCCGTGTCGGGTGAACGGAAAGGAGGGTCATGCTTGCCCCTGATAT AGCTGTGTCTCAAATTTATGGTGAATTTTCCAACATGTAGGTGGTAGTGCCACTGGATCAGGTGAGCATGGTTACTCCTTCTTCAAACAGATTGAATCCA AAGGAAAAGTACATTGAACTTGTGACAGTGGATGGTTATGAATTCTTTTTTTATGGGTCTTTTAGCATATGAAAATGCTCTAAAGACTATAAAAGAGGCT TTGCCACAATATCACAAATACTATAGAGGAAACCTGAGTGTCCAGGTTCTGCTGTAAAAATGTTATATGTTTATAGAAACATAATTCTGTATGTGCTTAG GTACACCCTTCAATAACAATGTACCATGTACTTTATGTAAAATCACAATTTCATTTAAGTATCATCACATCGAGCTCCTCCCTTTTTTTCATTATATATC TACATA BLAST |
Tissue | pods |
Gene name | LI_gene_192603; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_348521
Blastp | - |
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Blastx | GEM-like protein 1 from Arabidopsis with 43.59% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413546.1) |
Pfam | Methyltransferase domain (PF08241.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |