| Id Trinity | TRINITY_DN52425_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_348529 |
| Sequence | TGTAGTGTCATATAGAGATTAGAGAATGAAGAAAACCGAGTAGTTCCTAATCATCAAGGAACGTGTAAAGGAAAGGCAGAGAGGTGAGAACAAAGACAAC CAGAAACACAATCGGAAAGGCAAACTGAAAGCCAAACAGAAAGGGCTAATTGAACTATGTATTCCTTAATCTGTTCTTTATCACATGTGAATGTCATAAT GTTAAGGTCCTAAAATAAAGTGTTTTTATCTCACAATTATCTCACTCAACCAACTTCAAACTTTCAAGTCCAAGCATATAAAATTTCAATTAGCTTATAA GTTTTCAATAATTTATCATCTATCACACTATTTCATATATACCATGTCTAATATCTATGCATTGTCATTATAAAAATTTATTCACTATCGTTGCATCATT CATAATTTATTTGGATTATTTTTTAAAAAATGAATAGTAACTAAATATGAATGATATATATATATATATTTCTCCTTAGTTAATCAAAATAATACTATCA CAATATTATTCCATTAACGTTTCTTCATTTCAAATATTTTCGTAGATCCAAACATAGTAAACATACAATCTTAACAGGCTATTCCGGTCACCACTCCACC ACTTTCCCTTTTATCTCTCATCTTTCTAGAAAGTGAACCAAACCAGACACCAAACTCACCGAGTCAACTCGCTCTTCACAAAACCCTTAAAAACCCTGCA TTTCTCAAATTTCATTCATAACGATGTATTCCCGTTTTGCCCCTACCACCCCTCTCTATATTACATTCCCTGCCACTGCTCTAAAACCCTTAATCGGTGC TAATCATAACTTAGCTCGATTCTGTTCTCGTTAGACCCAAAAAAATCACCATTTTTATTTTCATTTTTTTTCTTACTATTTTATTTAACTGAAAATAGAA GAAAAAGAAAAGGTGCAGAATCTGTATAATGGAACCTGCCACAGGGAAGCATAGCTCTCTCAGAAATGTTCTGATACGGTTACTTCTTCTCGCTGTTTTC ATCTTCGGTGTTCGTTTCGCTTACGTCATCACCGTCGCCGGAACTTCCTGCGCCGTCGCCGACTTCTGCTTCTTCTCGCTGCCGGAAACTCTTAACCTCG TCTTGTCCGGAGTTGTCTCCGGTACCGGGCCTGTCGCCGTTGAAAGGTCCGTTTCCGGCGGTTCCGTGTTTCCGGAGAATCAAACCAGAAAGGAGTGGGT TAACGGCGTTAGTTTCTTCTCGTCGGTGTTTCGGGAGCTAGTTTCCGACGGTTATCTCTCTCCGGCGTCGAAATCGCTTTGCGTGGAAAGGCCGACCGGT CACGGTGTGTTGGCGTTGAAGGAGATCGGTGTTGTTGATGCTGTAGGAATCTCGAAGAAAGCGTTGAAGGCTCTGGTGAAACCTGGGGAAGGACAGTGGA TTCCGTTCGCCGGAGAAACCTTCGATTTCGTGTTCTCCGGGGACTTCATGCTGGAGGAGTTGGTGAGGCCAACGGAATTTGCTTCGGAGATTGCTCGGAC ACTGAAACCCGAAGGGTTCGCAGTGTTCCATTTAGCAAACCCTAGAGATACGTATAGCTTCAATTCATTCCTTAATTTGTTCAATTATTGTTTCAAATTA GTGAAATCGCTTGATATAGATGGATTTGATTCTTCAATGCCGATTATACGTGAAATTGTTTTGAAAAAGGAGTGTGGTAGTGTTAATGATCAATTTCATA GTGTTGTGAATTTTGAGAACTTGATAGTGATTACAACAATGGTTATAGTGATGGTAATTACAATGAAAAGTGTTCTATACCGAGGTATAAGAAAGATTTG GTTAGGAATGCCGAGCCACTGATTTTAGAGGAACCGTTGAAGCCATGGCTTACTTTGAAAAGGAATGTTAAGAATATAAAGTACCTTCCTTCAATGGTTG ATATAAGCTTTAAGAATAGGTATTTGTATGTTGATGTTGGAGCTAGAAGTTATGGTTCTAGTATTGGATCTTGGTTTAGGAAACAATACCCTAAGCAGAA CAAGACCTTTCATGTGTATGCAATTGAAGCCGATAAGACTTTTCATCAAGAGTATGGGTTGAAGAAAGGGGTCACTTTGGTTCCTTATGCTGCTTGGGTG AAGAACGAGACCTTGATGTTCGAGATTCATCGTGATCCTGGGGAGCATGTTGAGGTTAAAGGTAGAGGGATGGGTAGGATTCAACCTCTGCAGTCCTCTG CTGGGGGTTTTGATGGTGAGGTTGAGAAGATACAAGGGTTTGATTTTGCTGCCTGGTTGAAGAGCATGGTTTCGAAAAATGATTTTGTTGTGATGAAAAT GGATGTGGAAGGTACTGAGTTTGATTTGATTCCGAGATTGTTCGAAACCGGGGCGATATGTTTGGTAGACGAGATTTTCCTTGAATGCCATTATAATAGG TGGCAGAGGTGCTGTCCTGGGAAGAGGAGTACAAAGTATGAAAAAACATATCAGCAATGCTTGGAGCTTTTCAATTCTCTTAGACAAAGTGGAGTTCTTG TTCACCAATGGTTTTGATTGGAAAAAATCCCATACTTTTCCTGTGATATCCTTAATTTGCATGTTTAACCTTCAACATGTGTTTTCTTCATAGTTTTTTG GAACTTTTTACACCAGAAAATAGAGAAGATTGTTGTTGTGTTTCAAATTTCTTTTCATGTAATAGCTGCAACTGAAAATGAAATCATTACTTTAAACTAA TGATATTTGTTTCACTTGTATAGTTATAGAAATATATAACTGCATACTATAATCTCTTATTTTATCTCTGAAAGAATTTGATTGTTTTTTACTTGTCAGT GCTAATTAGTTGGTTTGAATCTACAGAAACTAAATTGATTTTAATCTACAGTTATTTTGGTTGATGAACTTTTTGACATTTGAGACTGAGAGTGACAGTT TTCTTTATGTTCTACTAGTCTTCTGGGTAGAATAGTAGCTTTTATTGCTATAATTGGATAATATTGTTAAATTATGAGACTTCAAGTCATTGTCCTAGTT CCTATATGCCTATTGCAGTTTGGGGAGAATTCAATCTGAAAACATTAAAGTGATCCTTTGTACTATCTAGAACCAAATATGATCAATTGTACTTTGTTTA TCAATAAGTTGTGTCCTTTGTTTTCTTGGGTGGTTCTCACAGTTTATGTAATCTGTACTGTTAATTTCGGGATTATTTTATTTGTTGATAATTGTCTTAG AGGTCTGGCAATAGGTTTTTCGATTCTGAGAGTAAAACTATGTACATCTGTCGTATTAAAATCTATGAAGTGGGAGCCTTGTGCAATGTGTTATAAAATA TAATATGACATATAAAATGATATATGTATATATGATAAAAAAATAGATAATCAATGAAACTTTCAACCAAAATAGTGTCACTACTCTGTATACATTTGAA TTGAAACACATATAAACATGATGAGTGAGTGATCATAAGACGAGTCATGATTGGTCACTACCCGACCCTAATATTGACAAGTCTAATTTTTAAATCCGAA CCTGACCCTATGACCGATGAGACCCGACTCTATTTGGATTCGATCATGATCGGGCCGTGTCGGGTGAACGGAAAGGAGGGTCATGCTTGCCCCTGATATA GCTGTGTCTCAAATTTATGGTGAATTTTCCAACATGTAGGTGGTAGTGCCACTGGATCAGGTGAGCATGGTTACTCCTTCTTCAAACAGATTGAATCCAA AGGAAAAGTACATTGAACTTGTGACAGTGGATGGTTATGAATTCTTTTTTATGGGTCTTTTAGCATATGAAAATGCTCTAAAGACTATAAAAGAGGCTTT GCCACAATATCACAAATACTATAGAGGAAACCTGAGTGTCCAGGTTCTGCTGTAAAAATGTTATATGTTTATAGAAACATAATTCTGTATGTGCTTAGGT ACACCCTTCAATAACAATGTACCATGTACTTTATGTAAAATCACAATTTCATTTAAGTATCATCACATCGAGCTCCTCCCTTTTTTTCATTATATATCTA CATA BLAST |
| Tissue | pods |
| Gene name | LI_gene_192603; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_348529
| Blastp | - |
|---|---|
| Blastx | GEM-like protein 1 from Arabidopsis with 44.83% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413546.1) |
| Pfam | Methyltransferase FkbM domain (PF05050.11) |
| Rfam | - |
| GO | - |