Ll_transcript_348517

Id TrinityTRINITY_DN52425_c1_g2_i1
Name TranscriptLl_transcript_348517
SequenceATAATGTAGAGATAAATTCAAATAATATATTGTATATTATTTGTATTTATTTTCACAATAATAATTACATTTATAAGATTTTTTATTTAAAAAATCACAC TTATATATAAAAATGAGGGGAATTTTCATATGCATAAAAAATAATGAATAATTTATGTAATAATTTTAGTGAAAGGGAGGGGTGCTAGTTTAATTTACTT TATTAAAAAATTATATCATAAACATGGTTTGAAATTAAAATATACAAACGAATGGGCATCGGTTCAAGTGTTACATGAGAGTTAGCCCCAATATACCTGT AGATGTTTCCCGCTCCGATAAGATTTTCTCTCTTACCAACCAAAATTAAAATATACACGCTAAACCAGATATATGCTCTGCTTTAATGGTATCATTGAAT GCGGACTAATCAAAGTTTGATTTTTTATTTTTGAAATGATTACAGAGTTTATTTCAGAGGAAGGAGAGATTTCTGAGCAAGTGATAATGAAGGCTTTCAA TGCAACGGAAGAGGAATTCTTCAATTTAGTGAAGCAATCATGGATTACTCTGCCACATATTGCTGCAGTGGGTTCATGTTGTCTTCTTGGGGTGATTTCA AATAACAATCTTTATGTTGCAAATCTTGGGGATTCAAGAGCAGTGCTGGGTAGAAAAGCATTGAGAAGTGAAGTAAATTGTGCTGCTGTAATGGCAGAGC GTTTGTCCACTGATCATAATGTTGGAGTGGAAGAGATCAGAAAGGAGGTTGAGGCTCTTCACCCTGATGATGCACACATTGTGGTTCACACTCGTGGTGT TTGGCGAATCAAGGGTATTATTCAGGTAACTTGTTATATTCAAGTTACCTGAATAGCTTCAGTGAAATTCTTCTTCTTCATCATTCTGAAGAGACATCTT TTTGAACCTGAATTAGTTGCATTTGCAAATTTGCAATATTAATTACTACTTTATCTCCTGCTTGTGAATTTACTATGTTTTTTGCTTTAAAATAAAGAGT TGTTTAACTGTGTTTCACTTCACAGGTCTCAAGATCGATTGGTGATGTTTATCTAAAGAAACCAGAGTTTGACAAAAATCCTCTATTCCAACATTTTGTA TGCCCATTCCCTTTAAAGAGACCTGTAATTACAACAGAACCGTCAATATTGACGCGGAAGTTGACAGCAGAGGATTTGTTTCTGATCTTTGCATCAGATG GACTTTGGGAGCATTTAACTGATGAAGCGGTTGTTGAAATCGTCTTCAGAAGTCCCAGAAAAGTAAGAAATTAAACTAAGAATATATTTTTCGTTTTGAA TGGCTATAGTAACTAAATATGTTATAAAGGATTTTAATTCAATTGTAGGGAATAGCAAAACGGTTGGTGAGAGCTGCATTGGAAGAGGCTGCAAAGAAAA AAGAAATGAGATACGTGGATTTAAAGAGAATTGAGAAAGGTACAAGGCGAAAGTTCCATGATGATATTACAGTGATCGTTATATACCTAGATCATTCACA AGGTTCTCTGAATAGTAGCCCAAAACATCAGGGTCATTGCATTAGTACTCCTGTAGATATATTCTCTGTGAATGCAGATGAAAATGACCTATAAACTGCA CAGCTACTAGTACTACGGTTGTTCATGAAAAATCTCTTTAATATAAGACCTTAACATTATGACATTCACATGTAAATAGATATAGATTTAGGAATATTTG ATTCCATTTGCTTTTCTGATTGATTTTCTTGTTGCGCTTCTGGTTGCTTTGTTCTCACCTCTCTGCCTTCCTTTTATGTGTTCCTTGATGATTAAGAACT ACTTAGTTTCCTCCCTTCTCTCTATGACACTCAATTTTCCTTCTTTGTGTTTCTCTTTATGAGATAACAAAGTGAATCAGATGGATGAATTTCCAATGCA AGAGTGCCTCTTTTATAGAAGGGTTTAGGAGGAGTTATCGGACGTTATAACTCCTCCACTATCACGGAAACCGCCCATGAAGTGAGAGGGAGGGAGTTTA CAAACCCCCCACTAGTCTGATCCATTAATTGCCAACCATCATCACATTAGGCACTTTAATTCAAACTAGTAACTTCCAAGAACATGGACCAC BLAST
Tissuepods
Gene nameLI_gene_192604; 
Additional informationdetails; 

Expression of Ll_transcript_348517

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_348517
BlastpProbable protein phosphatase 2C 78 from Oryza sativa with 59.7% of identity
BlastxProbable protein phosphatase 2C 63 from Arabidopsis with 58.62% of identity
EggnogPhosphatase(COG0631)
KeggLink to kegg annotations (4352638)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019444900.1)
PfamProtein phosphatase 2C (PF00481.20)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;