Id Trinity | TRINITY_DN52425_c1_g2_i5 |
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Name Transcript | Ll_transcript_348531 |
Sequence | CACGAGTCTGGCTCTGGTGGCATTTTCTTCCTCACCAATATTTTCCCGTGAAAATATTATTCTACTCAAGTTATTCTACAGTGTTGTTTACTTATCTTTC AACCCTCTAACGCGGAATCCACACGTTACTCTTTCCCATTCCATCTTCTAAAGTCAAGTCAAGAAATAATATCAATTCCTTTCCCCAACAAAATCCTCTG TTCTCAAATATCAACTAACGTCGACCACACTCAACGACAGACATCGTGAAAATTAAGGATGTTGGAGCTGTGTGAAAGGCCATTTGAGATGTGCTTTGGT GGTGGTGGAGGAAGCAAGGATAGTCTATTATGGCACGTGGATTTGGAGCCACATGGTTCAGGGGATTATTCAATTGCAGTGGTACAGGCTAATTCGTTAT TGGAGGATCAAGGACAAGTTTTTATCAATCCCTCCGCAACTTTCATTGGAGTTTACGATGGTCATGGTGGACCTGAAGCTTCCCGTTTCATCACTAAACA TCTCTTTTCCTTCCTTCATAGTAAGACACTCCTACACGTGATTTTTTCCTGGTTATTCCTGAATTGTTCCCATGTATTACATGATAATTGTTTCGTTTTA ACTGAAATAGCATGAATACCTTCACTTAACTATTCAAAATTTTGGTTGTTTAACATCATTGTGTAACATTCATTTATATTTTTATATACTTGTATATTAA AAAGAATAAATTATACTCATACTCTAATGTAATATTAAAGAGTGAAATTACACAATCACTCTCCCATTTTACACTTGGAGAAACCATTGATTTTTATACA AATATTATACTAACTAACTTTACCTTAAGTGTGATCTTTTTAAGAAAAAGAAGATGATGAATGTAATTAAGTTATATAAAATATTATATAATGTAGA BLAST |
Tissue | pods |
Gene name | LI_gene_192604; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_348531
Blastp | Probable protein phosphatase 2C 63 from Arabidopsis with 63.22% of identity |
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Blastx | Probable protein phosphatase 2C 63 from Arabidopsis with 62.5% of identity |
Eggnog | Phosphatase(COG0631) |
Kegg | Link to kegg annotations (AT4G33920) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444900.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |