Ll_transcript_348543

• Id Trinity: TRINITY_DN52425_c1_g2_i9
• Name Transcript: Ll_transcript_348543
• Sequence: CACGAGTCTGGCTCTGGTGGCATTTTCTTCCTCACCAATATTTTCCCGTGAAAATATTATTCTACTCAAGTTATTCTACAGTGTTGTTTACTTATCTTTC AACCCTCTAACGCGGAATCCACACGTTACTCTTTCCCATTCCATCTTCTAAAGTCAAGTCAAGAAATAATATCAATTCCTTTCCCCAACAAAATCCTCTG TTCTCAAATATCAACTAACGTCGACCACACTCAACGACAGACATCGTGAAAATTAAGGATGTTGGAGCTGTGTGAAAGGCCATTTGAGATGTGCTTTGGT GGTGGTGGAGGAAGCAAGGATAGTCTATTATGGCACGTGGATTTGGAGCCACATGGTTCAGGGGATTATTCAATTGCAGTGGTACAGGCTAATTCGTTAT TGGAGGATCAAGGACAAGTTTTTATCAATCCCTCCGCAACTTTCATTGGAGTTTACGATGGTCATGGTGGACCTGAAGCTTCCCGTTTCATCACTAAACA TCTCTTTTCCTTCCTTCATAAGTTTATTTCAGAGGAAGGAGAGATTTCTGAGCAAGTGATAATGAAGGCTTTCAATGCAACGGAAGAGGAATTCTTCAAT TTAGTGAAGCAATCATGGATTACTCTGCCACATATTGCTGCAGTGGGTTCATGTTGTCTTCTTGGGGTGATTTCAAATAACAATCTTTATGTTGCAAATC TTGGGGATTCAAGAGCAGTGCTGGGTAGAAAAGCATTGAGAAGTGAAGTAAATTGTGCTGCTGTAATGGCAGAGCGTTTGTCCACTGATCATAATGTTGG AGTGGAAGAGATCAGAAAGGAGGTTGAGGCTCTTCACCCTGATGATGCACACATTGTGGTTCACACTCGTGGTGTTTGGCGAATCAAGGGTATTATTCAG GTAACTTGTTATATTCAAGTTACCTGAATAGCTTCAGTGAAATTCTTCTTCTTCATCATTCTGAAGAGACATCTTTTTGAACCTGAATTAGTTGCATTTG CAAATTTGCAATATTAATTACTACTTTATCTCCTGCTTGTGAATTTACTATGTTTTTTGCTTTAAAATAAAGAGTTGTTTAACTGTGTTTCACTTCACAG GTCTCAAGATCGATTGGTGATGTTTATCTAAAGAAACCAGAGTTTGACAAAAATCCTCTATTCCAACATTTTGTATGCCCATTCCCTTTAAAGAGACCTG TAATTACAACAGAACCGTCAATATTGACGCGGAAGTTGACAGCAGAGGATTTGTTTCTGATCTTTGCATCAGATGGACTTTGGGAGCATTTAACTGATGA AGCGGTTGTTGAAATCGTCTTCAGAAGTCCCAGAAAAGTAAGAAATTAAACTAAGAATATATTTTTCGTTTTGAATGGCTATAGTAACTAAATATGTTAT AAAGGATTTTAATTCAATTGTAGGGAATAGCAAAACGGTTGGTGAGAGCTGCATTGGAAGAGGCTGCAAAGAAAAAAGAAATGAGATACGTGGATTTAAA GAGAATTGAGAAAGGTACAAGGCGAAAGTTCCATGATGATATTACAGTGATCGTTATATACCTAGATCATTCACAAGGTTCTCTGAATAGTAGCCCAAAA CATCAGGGTCATTGCATTAGTACTCCTGTAGATATATTCTCTGTGAATGCAGATGAAAATGACCTATAAACTGCACAGCTACTAGTACTACGGTTGTTCA TGAAAAATCTCTTTAATATAAGACCTTAACATTATGACATTCACATGTAAATAGATATAGATTTAGGAATATTTGATTCCATTTGCTTTTCTGATTGATT TTCTTGTTGCGCTTCTGGTTGCTTTGTTCTCACCTCTCTGCCTTCCTTTTATGTGTTCCTTGATGATTAAGAACTACTTAGTTTCCTCCCTTCTCTCTAT GACACTCAATTTTCCTTCTTTGTGTTTCTCTTTATGAGATAACAAAGTGAATCAGATGGATGAATTTCCAATGCAAGAGTGCCTCTTTTATAGAAGGGTT TAGGAGGAGTTATCGGACGTTATAACTCCTCCACTATCACGGAAACCGCCCATGAAGTGAGAGGGAGGGAGTTTACAAACCCCCCACTAGTCTGATCCAT TAATTGCCAACCATCATCACATTAGGCACTTTAATTCAAACTAGTAACTTCCAAGAACATGGACCAC
• Tissue: pods
• Gene name: LI_gene_192604;
• Additional information: details;

Expression of Ll_transcript_348543

FPKM

• PAB: 1.7
• PNAB: 0.2
• PS1: 0.4
• PS2: 0
• PS3: 0
• PW1: 1.1
• PW2: 1.1
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_348543

• Blastp: Probable protein phosphatase 2C 63 from Arabidopsis with 63.93% of identity
• Blastx: Probable protein phosphatase 2C 63 from Arabidopsis with 58.17% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (AT4G33920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444899.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;