Id Trinity | TRINITY_DN52425_c1_g5_i4 |
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Name Transcript | Ll_transcript_348534 |
Sequence | ATTTGCTATCACATAAAGAGAGACGCAAAGTAAGGAAAGTGTAGTGCCATATAGAGAAGGGAGGAAAAGTAGTTCCAATTCATCAAGGAACACATAAAGA GAAGGCAGAGATGTGAGAACAAAGCAACCAGAAACGCAACAAGAAAAGCAACCAGAAAAGCAAATGGAACTAGAGAGAAATATGGGAGACGAAGATAACT TGAAGGGTGAACAAGCTTTTAAGAACTCATACGTACCAAAGTGGACAAATCAAATAACAATTAGGTCAGTGATTACAAGCTTTATCCTAAGCATCGTCTT CAACTTCATTGTGTGCAAACTCAACTTCAGCACTGGGATCATTCCATCACTCAATGTAGCTGCAGGGTTGTTAGGGTTTGCAGTGATCAAAGCCTACACT GCACTCCTTCACAAGTGTGGCCTTCTCAAACAGCCTTTTACTCGTCAAGAGAACACTGTCATCCAGACATGTATTGTTGCGTCCTCAGGAATCGCATTCA GCAGTGGTACTGGCAGTTACTTACTTGCAATGAGTCCATACATTTCTGGTCAAGTAGGTGGTGGTGGGGACATGCCAATCAATACAAAGGTTCTCTCCCT CGGCTGGATGATGGGTTTTCTCTTTGTTGTTAGCTTTGTGGGCTTGTTCTCTATTATGCCTCTAAGAAAGCTTATGATTTTGAAGTACAAACTTACATAC CCAAGTGGAACTGCTACAGCTCATCTTCTCAATAGCTTACACACACCAAAAGGAGCAAAGCTAGCAAAGAAACAAGTTGCTATGCTCTTCAAAAGCTTTT TAGGAAGCTTTTCTTTTGGGTTTTTCCAATGGTTCTTCAATGGAGGAGACGGTTGTGGATTCAGCAGTTTTCCCACATTTGGTCTTCAAGCTTTTAAGCA AAAGTTCTATTTTGATTTCTCATGCACTTATGTTGGAGTTGGAATGATCTGTCCTTACATAATTAATATATCTTTGCTTCTTGGATCTATAATCTCATGG GGTGTTATGTGGCCTTTGATTGAGCAAAAGAAAGGTGTCTGGTATAGTGCAGGTCTATCTCCTACCAGTTTAAGTGGAATCCAAGGATATAGGGTCTTTG GTGCTATAGCTATGATGCTTGGTGATGGTCTTTACCATTGCATCTCCATGCTATTACAAGTTGCCTATAGTCTTAAATTGCAATACTCCCAGAAAAATGA GGTGGCATCCTCTGTAAACCCTGAAGGTGATGATTACCAAATTGCAGAAGTGGATTACGATGTGGAGCGCCGAACCGAGTATTTTTTGAAAGATCAGATT CCAAATTGGGTTGCCTGCTCTGGTTATGTAGTCCTCGCAGCTGTTTCCATCGTAACCGTGTCACATATCTTTCCTCCACTGAAATGGTATCATGTACTAG TAGCTTATCTAATTGCTCCTGTTCTGGCTTTCTGCAATGCTTATGGATGTGGTCTAACAGATTGGTCATTAGCATCAAATTATGGCAAAATTGCAATCAT TATTTTCAGTTCTTGGGTAGGACTACCCAATGGAGGTGTACTTGCTGGTCTTGTGTCTTGTGGTGTTATGATGAGTATTGTTTCAACAGCTTCTGATTTA ATGCAAGACTTCAAAACTGGGTATCTTACACTTGCATCTCCAAGGTCTATGTTTCTAAGCCAAGTTATAGGCACAGCCATGGGTTGTATCATGTCACCTT TGATCTTTTGGTTTTTCTACAATGCTTACAAACTTGGTGACCCTACAGGCGCTTACCCTGCACCTTATGCTCAAGTTTACCGCGGAATTGCGCTTCTCGG TGCAAAGGGTTTCTCTTCTCTTCCAAAGCATTGTCTAACACTAGCTATCATATTATTTTGCACTTCTGTGCTCATTAATATGATACATGATCTTTTGATG CATTATGAGACCAAGTATAAGATACATAGGTATATTCCAAACCCAATGGCCTTGGCTATTCCATTCTATCTTGGTGGGTATTTTGCAATTGACATGTGCA TTGGAAGCTTGATTCTTTTTATATGGGAGAAAAAGAGTAAGCAGAATTCTAAAGATTTTGCTCCTGCATTAGCATCTGGACTCATTTGTGGTGACTCTTT ATGGAGTGTTCCAGCTGCTATACTTTCTCTTGCTGGTGCTCAATCTCCAATTTGCATGAAGTTTTTATCTGCCCCTATGAATCTTAAGGTTGATAAATTC TTGTCTGGTGAGTGATGATCTTGTTGGAATGCAGATCAGTTGTTTCTAACTTTGTCCTCAACCATGTTAAAATCTAATAAAATTGTGAAACTTACTAAAA ATTTGTGCAGTGGGAAACATACATGTTGATTTTTATTAGGTGTCAAGATTTTATTGGAACGAGACAGAGTTCGGGATATGTTTATGGAACAGGTGATCTT GATTCGAAGTTGTTTGGTGTTTAGTTTAAGTGTTATGAAATTCTTAGGAGTTTGATAGTATTATTATACTTAAATTTCTTTTACAGGGTCTGTTTCTATT GTTTAAATATGGTCATTGAAATTTTCATGTTGTTAATTGTAGCTAAGAATTTGATTTTATCATAAATAAATTTGTGAAAGCTTGGGTAGATATTCCTTTT CTCTTCACATGTTGATATGATCAAGTTAAATTTAAATTCAAATTTTCTAAATATTATGTGTATTTCATTGATATTTTAATGCAAC BLAST |
Tissue | pods |
Gene name | LI_gene_192607; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_348534
Blastp | Probable metal-nicotianamine transporter YSL7 from Arabidopsis with 62.7% of identity |
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Blastx | Probable metal-nicotianamine transporter YSL7 from Arabidopsis with 62.7% of identity |
Eggnog | oligo-peptide transporter(COG1297) |
Kegg | Link to kegg annotations (AT1G65730) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019454886.1) |
Pfam | OPT oligopeptide transporter protein (PF03169.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |