| Id Trinity | TRINITY_DN52429_c1_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_349943 |
| Sequence | CTCAAGCCTTCCATTCCCCTTCCTTCCCCTCCAAAATCCAACTCCCAAACTAACCCTAAGGGTAATTCTGATTTAGCTAAAGCAGGATTTCCAATTAAGG TCACGAATGAGTCTTCCTTCTTCACAGTTAACCTCATCCTCCCAAAGTCAGCTCTGACTTCACCAAGAGTAGCTAGCCACTCCAATCCCAACACTAGATC TACTCATCTCAAGGTAAACAAATAGAAGTCCTGGGTTACCTCAATTTGTTGCATCTCCAATTTCAATTGTGAACATCTTCCTCTGCAAGAAACCTGATGG CCATCACCCACCTCTACTATGTAAGCTCTCGTCTGTTCCACCTTAAGCTGCAATTGAGCAACCAACTCCTTAGAAATGAAGTTATGTGAGGCACCACAAT CAATCAGAATGGTGACCTTTGATAGCTCCCTCAAGCTTCCAAGACCTGGTGGATGTGAGCCCCTTCATGGAACAGAGAGACAACTGCAAGGAAGTAAAGC TCCCCACCTCTGCCTCTGATTCCTCTCCTACTTCATTCTCATCCTCTTCAGCCATAAGCAACATTTTCAATTGCTTATTCTTGCACCTATGCTCCCTGGA ATAGGGTTCATCACACCTAAAACATAGACCCTTTTCCCTCTTCTCCCTCATTTCAGCACTTGACATTCCTATAATCACCCATCACCTCAGATCTTTCCAC CTCTGAAGTGCCCTTAAAGGGAGCAGAAACACTTCCAGTTGAAGATCCTTCCTTTCTGCTGTTACTAGTAGAGGAGGGTTCCAAAGTTACCACCCTGCTG TATGAGTTACTTCTAACTGAAGCATATGACCTTGCAAAACCACCCTGACTTCTCTTAGTAACCATTGAATTCTTCTGCTCAATGAGGATAGCCCTCTAAA TGACTTCTGGTAATGTCTTCAAGTCATACAACTTTACCTCAACCCTAATTTCCTCTTTGAGCCCATTCAGAAACACACCTCTAACAAAATCTTGGTTAAT TCCCCGTAAAGCTCCAACATATTTCTCAAATTCCTCAACATATGCTTCTACATTTCCCTCTTGTTTCAGGGACAACAACAATTCGAAGGGGTTTTGGACC ATGGATGGCTGAAACCTCCTCACAACTGCCACTTTGAAGCTTTCCCAAGTAGGTGAGGGGTTGCACCCTTCCCACCACTGAAACCAGCTCAAGGTCCTTC CTTCCAACGCTACCATAGTCGCTTGCATCTTTTCTGAATCAGTGATGCACCTGAGGCTGAAGTACCTCTCTAATTTCTGAACCCACCCAAAAGCGTCTTC TCCTCCAAAGATTGGGATTTAAGTTTCCTCCATTTGTCGTGACCTAGTTGTCCTCGGTTACCTTCTACCTCATCGTAATTCTCACTACCTTCCATATGAT AATTCTCTCCTCCATCAATCCCCAATTTTGTAGCGATGGCAGCCACCAAATCCTCCGTTTTCTTGGTTCTTGCTTCATTCAATTCTAACCGAAGACGAAT TTCCTCCCTCTCCAATCGCAATGCGTCTCTGTCTTGATTCCAACTTTCACCCTCCTTAGCCATGCTTCTCGTGGATACCATAGACCACCGGAGATCACTG TCGCAACGAATCGTGATAGCTCCCACACCTCATGCACCAAGAAGGTGCTCTGATACCAGTGATAACACTGGTATCAGTTAAGAAGAAAGAATAGAGAAGA ATGAAAGGAAAAGCCCCTAAACCAGAATCAAGATGATCCTGCTAGCGTTCTAAAGAAAGTTTTGTTTGAAAGAAGATGAATTATAGGAGAAAGTTGTTTA CAAGAGATCCCATGATCCCAACCCTGGTTCCACAATCAGTTTTCAGTAAATTCTTGTTAACTAACTTTCCGCCCAAAGATTGAATTCTATTTATAGTTGA AACTAACTAACTAACTGCTCCAGGGGTAAAAGAGGAAAGCTGGTTACTTAATTTAACCAAACCTTCCTTTTACCCCTTTTATACACATGCTTTATTTCTG GTTTATAGTGAACCTTATCAATATCCCCCTTAGAAATCTTAACTTGTCCTCAAGTTGAAATTGGGGAAAGTTGTCTTGTAATTGAGCTAGTGATTCCCAA CTACTCTCATGATCAGGAAGTCCCTGCCACTGAACCAGGACCTCCTCAGTGCCTTGATCATCCACTCTTCTATCAGTCACATCTTCTGGAGTTACCATTA ATTCCAGTTCCTCATTCAGCTTAGGGGGAAGGGGTTGAGGATGTTGATGAGGCTTGAGTGCTCTCTTTAACAAAGATATGTGAAAAACTGGATGGTTCTT GGAATGAGCAGGTAATTCCAACTGATAAGCTACCTCACCTACCTTTTTAGTGACCTGGTATGGTCCATAGTATCTAGGGGCCAATTTTGCACAAGGTCTA GCAGCTATAGACTTCATTTTGTAAGGTTGTAGTTTGAGAAAGACCCAATCCCAACCTCAAATTCCAAGAACCTTCTATGCTTATCTGCATACTGCTTCAT CAAATTCTGTGCCTTTGCCAAATTACTCTTCAATTCTTCCAAAACATCATCTCTTTGCCTATATAATCTGTTCATTTCCTCAACCTTGGATGGAACAGTC CCTGCTTTCAACAAAGTAGGAGTATCTCTGCCATAGAGGGCCTTGAAAGGAGTCATACCAGCTGAAGTATTGTAATTGGAATTGAACCAGAAATCTGCCC AATGCAACCGATCAACCCACTGTTTTTTGTTTAGGCCCCACAAAGCACCTAAGATAAGTTTCTAGGCATCTATTAGTCACTTCAGATTGCTCATCTGTTT GAGGGTGATAAGAAGTACTCAATTTCAGTTGGGTACCAGCCATTCTAAAGAGTTCTTTCCAAAATTGGCTAAAAAAGAGAGGATCCCTATCAAAAATAAT AGTAGTAGGAAACCCATGGAGCTTGACCACTTTTTTTAAAAACAAGGCAGCCACATCTTTAGCTGAGAAGGGGTGCCCCAAAGCATAGAAGTGTGCATAT TTTGTAAGTCTGTCAACCACCACCATGATGGTATCCTTACCTCTCACTCTAGGAAGCCCTCCTATGAAATCCATGGATATATCCATCCATACTTGTTGAG GGATGGGTAGGGGTTGTAGCAAACCTGCAGGGGCTAGAGTAGAGTATTTATTCCTCTGGCAAGTATCACAATCTTCTACAAAAGCCTTGATATTTGCCCT CATTCCTTCCCAATATAGGAAACTAGCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_192643; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_349943
| Blastp | - |
|---|---|
| Blastx | Transposon Tf2-9 polyprotein from Schizosaccharomyces with 40.38% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_012573197.1) |
| Pfam | Chromo (CHRromatin Organisation MOdifier) domain (PF00385.23) |
| Rfam | - |
| GO | - |