Ll_transcript_349863

• Id Trinity: TRINITY_DN52431_c0_g1_i11
• Name Transcript: Ll_transcript_349863
• Sequence: AAACACTTCTTCCTTCTTTCTTTGGGTAGTAAAATTGAATCACCTCAACCCCCGAATGTTAATTCTCTGAAAACCCTAACAACAATTTTCCTCATCTTCA TACCACTCATGGAAATTTCATTCTCTTCTTAAACCCTATTTCGAATCATCTCCACACCTCAAATTCAACGCTTCCTTTGGTTGCAATCACAACAATAATG TCTCTCCCACCAGTACAGTATCTATACGTGACAGAGGACTCTCTTCGCGAATGGAAGAATGGAAACCCTAATCTCAAGCTTTCTGATCCTGTTCCATTGC TTCGATTCCTCTACGAGCTATGCTGGACTATGGTTCGGGGTGAATTGCCGTTACAGAAGTGTAAAGTGGCATTAGATTCTGTAAGATTCTCAGAGAAAGC TTCAACTGCGAAGTTAGCTTCAAATTTTGCAGATATAGTAACACAGATGGCACAAGATCATACAATGTCAGGAGATTTCCGTTCTCGTCTCATCAAACTG GCAAGATGGCTTGTGGAATCTGAATTGGTTCCAGTTAGGCTACTTCAAGAACGTTGTGAGGAAGAGTTTTTGGGGGAGGCTGAATTGATCAAAATAAAGG CTCAGGAGTTGAAGGGAAAAGAGGTCAGAGTTAATACACGACTTCTGTATCAGCAAACCAAATTTAACCTTCTTAGAGAAGAGAGTGAGGGTTATGCAAA GCTTGTCACTCTTCTTTGCGGGGACTCTGAAGTTCCAACTGAAAAGGCATCTACTGCAACAATTGGCATTATTAAGTCCTTAATTGGCCATTTTGATTTG GACCCAAATCGCGTTTTTGATATTGTTCTTGAGTGCTTTGAACTTCAACCTGAGAACCATGTGTTTTTGGAGCTCATTCCTATTTTTCCGAAGTCTCATG CTTCACAAATTCTTGGATTTAAATTTCAATATTATCAGCGCATGGAAGTCACCAGTTCTGTGCCATTTGGGCTCTATAAACTTACAGCCTTGCTGGTGAA GCAAAACTTTATTGATCTTGATAGCATATATGCACATCTACTTCCCAATGATGATGAAGCATTTGAGCATTATAACAGTTTCTCTTCCAAGCGCCTTGAT GAGGCTAACAAAATTGGAAAAATAAACCTAGCAGCTACCGGAAAAGATCTCATGGATGATGAGAAACCGGGTGATGTCACTATTGATCTCTTTGCTGCTT TAGACATGGAAACTGATGCAATTGAAGAGCGAACACCTGAGCTTCAAAACAATCAAACTTTGGGCTTGCTTATTGGCTTCCTTTCTGTGGATGATTGGTA TCATGCACATATCCTATTTGACCGTCTTGCATCACTTAATACAGTGGAACATACACAAATATGTAGCAGTTTGTTTAGGCTTATCGAGAAGTCAATTTCT TCAGCATATGACATTATTTGTCAAACACATCGTCAAAACTCTGGATCGCCCACGGGTGGTGGCACTGATGCTATGGATGAAGATAACTCCTCAGGAGATG GATCTTTCATAGATCTTCCAAAGGAACTTTTTCAGATGCTTGCTTGTGCTGGACCTTATCTCTACCGTGATACTATGTTGTTGCAGAAGGTATGCAGGGT GTTGCGAGGTTATTATCTTTCTGCTCTCGAACTTGTAAGCCGTAAGGATGGTGGTGCTTTAAATCCTCATCTACACCTTAAGGATGCAAAGCTAAGGGTG GATGCTGCTTTGGGAACATGTTTACTTCCTTCGCTGCAGTTGATTCCTGCCAATCCAGCTGTGGGCCATGAAATTTGGGAACTAATGAATCTCCTTCCTT ATGAGGTGCGATATCGTTTATATGGTGAATGGGAAAGGGATGATGAGCGCTTTCCTATGCTCTTGGCTGCAAGACAAACTGCCAAGTTGGATACTAGACG CATCTTGAAACGGCTAGCAAAGGAAAACTTGAAACAGTTGGGTCGGATGGTTGCAAAATTAGCTCATGCCAACCCTATGACAGTCCTTCGAACAATTGTC CATCAGATTGAGGCGTACAGAGACATGATTACTCCTGTAGTGGACGCATTTAAGTATTTGACTCAGCTTGAGTATGATGTACTGGAATATGTTGTGATCG AGCGTTTGGCACTTGGTGGGCGTGATAAGTTAAAGGATGATGGACTTAATTTGTCAGACTGGCTTCAATCGCTAGCTTCATTTTGGGGCCACCTATGTAA GAAGTACCCATCAATGGAATTAAGGGGCCTTTTCCAATATCTTGTGAATCAGTTGAAAAAGGGGCAAGGAATTGAACTTGTTCTACTGCAGGAGCTCATT CAACAAATGGCAAATGTCCAGTACACTGAGAATTTGACTGAGGAACAGCTGGATGCTATGGCAGGGAGTGAGACTCTCAGATATCAAGCAACTTCTTTTG GAGTAACTCGAAATAATAAGGCACTGATAAAGTCAACTAGCAGGCTTAGAGATTCATTACTTCCAAAAGATGAACCGAAGTTGGCAGTTCCCCTCTTATT GCTTATTGCCCAGTATCGTTCTCTGGTTCTCATCAATGCAGATGCACCTTACATTAAGATGCTTAGCGAGCAGTTCGATAGAAGCCATGGAACTCTTCTT CAATATGTCGAATTTCTTTGCAATGCAGTTACGCCAGCAACAAACTATGGTGTCCTTATTCCCTCGCTCAATGACCTGGTCCACCTTTACCATCTGGACC CTGAGGTTGCTTTCTTGATATATCGCCCTGTGATGAGGCTTTTCAAGTCTCAGAGGACTCCTGATGTTTGCTGGCCCTTGGATGATAAAAATTCTGCAAG TGATGCATCTACAAACATTGAGTCTGATCCTGCAGATTATTCTAGCAGTATGGTTTTAGATCTTGGTTCAGCTCAAAATCCTTCAAGCTGGTCAGATCTT CTTAATACTGTTAAAACCATGTTGCCTTCAAAAGCCTGGAATAGCCTATCTCCTGATCTTTATGCAACATTTTGGGGTCTCACATTATATGATCTGTATG TTCCAA
• Tissue: pods
• Gene name: LI_gene_192654;
• Additional information: details;

Expression of Ll_transcript_349863

FPKM

• PAB: 0.3
• PNAB: 3.4
• PS1: 5.1
• PS2: 3.8
• PS3: 3.6
• PW1: 2.4
• PW2: 2.7
• PW3: 3.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349863

• Blastp: THO complex subunit 2 from Arabidopsis with 74.36% of identity
• Blastx: THO complex subunit 2 from Arabidopsis with 74.36% of identity
• Eggnog: tHO complex(ENOG410XQ2A)
• Kegg: Link to kegg annotations (AT1G24706)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437446.1)
• Pfam: THO complex subunit 2 N-terminus (PF16134.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;