Ll_transcript_349495

• Id Trinity: TRINITY_DN52438_c3_g1_i5
• Name Transcript: Ll_transcript_349495
• Sequence: AACGGTGTGTTTTACTTCACCTCAACATTCCCGTGGTTCAACTCTTCATTCTAAACATCGGTGCCCTAACTTTCTCTCTCTCACCTCGTTCTCGATCGCA ATCTCTGTATTCTCCAACTCCGGTGCAGAGGTTGTTTCCAGGATTTGAACCAATGCCCTCATGGTCACTAAGCAACAATCTTGCGGCTTCAAAATGTCAC AACTCTCAGCTGCGTGTTTAACTGTTTGGGATAGATGAATTGACAGATTGTCTCTAAGATGAATGGTACAGAAGCAGAGTTGTATTATTCTGTGAATGTT TGGTCGTGTGACTAAAATCACGTGTTATATACTTTCACTTTTGTTAACTCAATTGTATCTAGAAGCTGTATAATTCTCGGACTTATTTTATTGCTTATAC TTGTTAGTGCCAATTTTATCTTCAACTCAGTTTCCCACTTTGTTTTAATCAATTTTTTAAATGAGCATTCAACTATGGAGAGATAAAAATATTAAAAAGA CAATTCTTGGGAAAATTTTGAAAAAGGAACCCTTGATAAAACACTTTACCATGTAGGAGAGAAAGAATAGTCCATCAAAGTGCTCATTTAAGACATTTCA AGCCAATGTATCGTAGTTTAAAATTAAAATCACTGCAGGCAGTTATTTTTTCCTTCTGCGGGAGTGCCTTATTTGAAACTTTCCCTAAGCTCTTTTATTT TCTTTCAACTTAGGGATACTTGATTCATTCCTCTCTATGTCTGTATTTGCTTGGAAATAAATCGCAGATCAATATGTCTCGAAGATATGATAGCCGAACA ACAATATTCTCCCCTGAAGGACGTCTTTACCAAGTGGAGTATGCAATGGAAGCCATAGGTAATGCTGGAACTGCAATTGGCATCTTATCTAAAGATGGTG TTGTTCTGGTCGGCGAAAAGAAGGTCACATCCAAGTTGCTGCAGACCTCAACTTCCACTGAGAAAATGTATAAGATCGATGATCATGTTGCATGTGCCGT GGCTGGGATTATGTCTGATGCCAACATCCTAATCAATACGGCTAGGGTCCAAGCCCAACGCTACACACTCGCATACCAAGAGCCTATGCCTGTTGAGCAA TTGGTTCAATCTCTTTGTGATACTAAGCAAGGATACACACAATTCGGTGGTCTTCGGCCATTCGGAGTCTCATTCCTGTTCGCTGGATGGGACAAAAATT TCGGCTTCCAACTTTACATGAGTGACCCTAGTGGAAATTATGGTGGTTGGAAAGCTGCAGCTATCGGTGCAAACAATCAGGCAGCGCAGTCGATACTAAA ACAGGATTACAAAGATGAGATCTCTCGGGAAGAAGCTGTTCAACTTGCATTGAAGGTACTGAGTAAAACTATGGACAGCACAAGTCTAACCTCAGATAAG CTTGAACTTGCAGAGGTTTTCCTTTCACCTTCCGGAAAAGTGAAGTATCAAGTTTGTCCCCCGGAGAACCTGACTAAGCTGTTGGTGAAGCATGGGGTGA CCCAACCAGCAACAGAAACTGCTTAGCTTTGTTGTTCTTTGTCATATGAGGTTTGGTTATGCCTATGCAATGAATTTCTATGTTTGTTTGTTCATTTTGG AATACATTTATAAACAATCTATGTCTTGGTTATGCTAATGCCTTTTTATCTCATATACTTCTTTAATTTTCAGGACTTAGATATATGATATTTTGGGTCT CCTCACAATGTTTTGGTTTCTAACCTTTTTTCATTTCTTGTCCCTATCTTTTTATTTTTTGGGTACCACCAAGGGTATCTCTCATCCTTTTGGGTAAGGA ACTAATCTCTTTCGGGGTGTATGACTATCCCTTCCAAAAAATGTGTTTTCCCTGAATCGAACGTCTATTAGTTCAATTCAATAATGGATCTATTAAAAAG G
• Tissue: pods
• Gene name: LI_gene_192714;
• Additional information: details;

Expression of Ll_transcript_349495

FPKM

• PAB: 0.6
• PNAB: 0.4
• PS1: 0.7
• PS2: 1
• PS3: 0.8
• PW1: 0.3
• PW2: 0.5
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349495

• Blastp: Proteasome subunit alpha type-4-A from Arabidopsis with 90.4% of identity
• Blastx: Proteasome subunit alpha type-4-A from Arabidopsis with 90.4% of identity
• Eggnog: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(COG0638)
• Kegg: Link to kegg annotations (AT3G22110)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442592.1)
• Pfam: Proteasome subunit A N-terminal signature (PF10584.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;