Ll_transcript_350881

• Id Trinity: TRINITY_DN52439_c1_g1_i20
• Name Transcript: Ll_transcript_350881
• Sequence: AAAACCTTTCTTTCGTTCACTTTTCCTCTGAAAACCAAGCACTGTGTAAAAGCCCATTTCCTCAAAAGTTTTGACCGTTGAAGAAAGAAAGAAAGATTAA AGACTTCACAATTTTGGTGTGCTATTTCATTACACTCCATCATTCCTCAATAACCGTCTCCGACTGCGCCTCTTCCACGCGCCGCCACCTTACTCCGCCG ATAACTATTCGGCAACGACCGTGCCGGCGAAGGCCAGAACGACGTCGTTTGCCACAACACAAAAAATTGAGAAGAAGAAGAAGAAGAAGGTGATGGGATC AAGGGGATTGTTCGGGTGGTCCCCACCTCACATACAACCGCTCACACCGGTTTCCGAGGTATCCGAGCCGCCGGAATCTCCGTCCCCGTACCTGGACCCT AGCGCCGAGACCTCGGCTTCGCAGCAGGTCGAGGTCGAGGAGGAGGTGGAGGAGCCTGAGGAGATTGAGCCGCCACCGGCTGCTGTTGCTTTCTCCCAGC TCTTCGCCTGCGCGGACCGGTTCGATTGGTTCCTCATGATCGTTGGCTCTGTCGCGGCTGCGGCTCATGGCACAGCTCTTGTTGTTTACTTGCACTATTT CGCGAAGATTGTACATGTGTTGAGGATGGATTCTCAGGAGGGAAGTTCTGAGGAGCAGTTTAAGAGATTCAGTGAGCTTGCTTTAACCATTGTTTATATT GCTGCGGGAGTTTTTACTGCTGGTTGGATTGAGGTTTCATGTTGGATTTTGACTGGGGAGCGACAGACTGCTGTCATCAGATCAGAATATGTTCAAGTAT TACTAAACCAAGATATGAGTTTTTTTGATACTTACGGAAATAATGGAGACATAGTGAGTCAAGTGTTGAGTGATGTGCTGCTTATTCAGTCTGCCCTTAG TGAAAAAGTTGGAAATTATATTCATAATATGGCTACATTCATTAGCGGTCTTGTCATTGGACTTGTCAATTGTTGGCAGATTGCGTTGATAACGTTAGCT ACAGGTCCATTCATTGTTGCTTCCGGAGGAATATCAAATATATTCCTCCACAGGCTTGCAGAGAATATTCAAGATGCATATGCTGAAGCAGCAAGCATTG CTGAACAGGCAGTTTCCTATATAAAGACATTGTATGCATTTACAAATGAAACATTGGCCAAATATTCATATGCAACATCACTGCAAGCTACTCTCAGATA TGGTATATTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACATATGGGCTTGCAATATGTTCTTGTGCACTACAGCTCTGGGTTGGAAGGTTCTTG GTTATTCATGGAAAAGCACATGGTGGTGAAATTATAACAGCTCTCTTTGCTGTAATTTTGAGTGGCTTGGGGTTGAATCAAGCAGCAACAAATTTCTATT CATTTGATCAAGGACGGATAGCTGCTTATAGACTATTTGAGATGATAAGCAGGTCATCCTCCTCTGTTAATCAAGATGGCACTACCCCCGATTCTGTGCA AGGAAATATACAGTTTCGGAATGTTTATTTCAGTTATCCATCTCGTCCTGAAATCCCTATATTGAGTGAATTTTATCTTACTGTACCTGCTAAGAAGGCT GTGGCACTTGTTGGCAGAAATGGCTCTGGAAAAAGTAGTATTATTCCACTCATGGAGCGTTTCTATGATCCTACATTAGGTGAAGTCCTTTTAGATGGTG AAAACATCAAGAATTTGAAACTGGAATGGTTGAGGAGCCAAATAGGACTAGTCACTCAGGAGCCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATTGC ATATGGGAGAGATGCCACCATGGATCAAATTGAAGAGGCCGCTAAAATAGCTCGTGCACATACATTTATCAGCTCGTTAGAGAAAGGTTATGACACGCAG GTTGGCAGGGCTGGTCTAGCCTTGAATGAAGAGCAGAAAATAAAACTTTCTATTGCGAGAGCTGTGCTTTTAAATCCATCTATCCTCCTGCTCGATGAGG TTACTGGTGGACTTGATTTTGAGGCTGAGAGGTCTGTTCAGGAGGCTCTGGATCTCCTTATGTTAGGGCGCTCAACAATAATAATTGCCAGAAGGCTTAG TCTTATAAGGAATGCTGATTATATAGCTGTTATGGAGGAAGGTCGACTTGTTGAAATGGGTACTCATGATGAATTATTGACCCGGGATGGCTTATATGCA GAGCTTCTCCGACGTGAAGAGGCCGCAAAGCTTCCCAAAAGAATGCCTGCTCGTAACTACAAGGATACTGCAGCTTTCCAAATTGAGAAAGAGTCTTCAG AAAGTCAGAACTTGAAAGAATCCTCATCCCCTAAATTGATGAAATCACCCTCTCTTCAAAAACTTTCTGCAGTATTTCAGCCTTCAGATGCCATCCTTAA TTCACAAGAATCACCAAATGTTCAGAGCCCACCTCCTGAGAAGATGCCGGAAAATTGTCAAACTTCGGATGCAGCAGATAAGGAGCCATCAATAAGAAGG CAGGATAGTTTTGAAATGAGACTACCCGAGTTACCGAAGATTGATGTTGAATCTATATATCGGCAAACATCAAAAGGTTCTGACCCTGAATCCCCTGTTT CACCTCTTTTAACATCCGATCCTCAAAATGAACGTTCCCATTCACAGACTTTTAGCAGACCAGATAGTGGCTCTGATGATTTTTCAGTGAAAATGAGGGA AACAAAAAGTGCACAGCATCGAAAACAACCCTCACATTGGAGGTTGGCAGAGCTTAGTCTTGCAGAGTGGTTTTATGCTGTGTTAGGAAGCATAGGCGCT GCCATCTTTGGTTCTTTCAATCCCCTGCTTGCTTATGTTGTTGGCTTGGTAGTGACAACTTACTATAGCATTGATGGAGCCCGCCACTTTAGAGGGGAGG TGGAGAAGTTGTGCTTGGTCATTGCTTGCATGGGCATTGTGACAGTTGTTGCCAACTTTTTGCAGCATTTCTACTTCGGTATTATGGGGGAGAAAATGAC AGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAACTGGTTGGTTTGATGAAGAAGAAAACAGTGCTGACAATTTATCAATTCGATTG GCCAATGATGCTACATTTGTGAGAGCTGCTTTTAGTAACCGGCTTTCCATATTTATACAGGATAGTGCTGCAGTAGTTGTTGCTATTCTGATTGGTGTTT TGCTGCACTGGCGAATAGCACTTGTGGTTTTGGCAACACTTCCAATCCTCTGTGTTTGTGCGATTGCCCAGAAACTTTGGCTTGCTGGATTTTCGAGAGG CATACAGGAAATGCACAGGAAGGCATCTCTGGTTCTTGAAGACGCAGTCAGAAATATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGGTGATGGAG CTCTACAGGCTGCAACTAAATAAAATACTTACGCAGAGCTTTTTTCATGGGGTTGCCATCGGTTTTGGATTTGGCTTTTCACAGTTTCTACTTTTTGCTT GTAATGCCCTTCTACTTTGGTACACTGCATTATGTATTAAAAATAGGTATGTAAGTCCAACCACTGCACTGAAGGAGTACATGGTTTTCTCATTTGCTGC ATTTGCACTTGTGGAGCCTTTTGGGTTGGCTCCTTACATACTTAAGCGACGTAAATCTCTCATTTCAGTGTTTGAAATTATAGACCGCGTGCCTAAAATT GACCCTGATGATAACTCAGCATTGAAGCCGCCCAATGTATATGGAAGAATTGAGTTGAAAAATGTTGATTTTTGTTATCCTTCTCGTCCAGAAATGTTGG TGCTCAGCAATTTTACTCTAAAAGTCAGTAGAGGACAAACAGTTGCGGTTGTGGGAGTGTCAGGGTCGGGAAAGAGCACTATAATATCTTTGATTGAGAG ATTTTATGATCCAGTTGCTGGCCAAGTTTTACTAGATGGGAGGGACTTAAAGCTATATAATTTAAGATGGTTAAGGAGCCACCTTGGTCTGGTTCAGCAG GAACCTATTATTTTCTCGACAACCATAAGGGAAAATATCATATATGCCAGGCATAATGCCAGTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCAAATG CTCATCATTTTATTAGCAGCTTGCCTCATGGATATGACACTCATGTCGGGATGAGAGGTGTTGACTTAACCCCTGGGCAGAAACAGAGAATTGCAATTGC GAGGGTAGTGCTGAAAAATGCTCCTATCTTGTTGGTAGATGAAGCAAGTTCATCAATTGAATCCGAGTCTAGCCGAGTGGTGCAAGAGGCTCTTGACACG CTAATAATGGGAAACAGGACCACTATTTTAATAGCGCATAGGGCTGCAATGATGAGGCACGTGGACAATATCGTAGTGCTTAATGGAGGACGGATAGTCG AGGAAGGAACTCATGATTCTCTTGCTGCAAAGAATGGTCTGTACGTCCGATTGATGCAACCTCATTTTGGTAAGGCAATGCGTCAGCATCATCGGCTTCT TTAGGATGGAGTATGTGATGTTAGTAATTGCGCTACTAATGGTCATTTGCGGGCATAGTTCTTCCTTCTTCCTGCCTGCATTGAATTGCTAGCTGGTGTC TTGTGCGCCCGATGGATCTTTCAATGAATGTCAGGTAGGAATGGTCGGTGGCAACGGGAATGATGAAATCTTAGATTCGCACACGATTATTGGGATAGAT TCTTTCGGAGGCAAACAGCTCTTAGACTAATGGTGTTTTATATCTCAGGAGGGTGGATTCAACACTAATTCTCTCATTGGACTTTAATTTTTTCACTCTT GCTAACTTACACGTGGATGATGAACTTATTCATAACTGTAGTTTTGTTTATTTTTTCTCTTTCAATTTGTGTAATTGTAGAAAATTTAGTTGCAAGAGTT GTTAACTTCTGTAAATATGATATAGCTATAGTTCAGAAGGCATTTCTTTTGCTGCTTCAGTCTCATGAGTGTTTTTCTTCTCTATTATTACAATGGATGC AAATTTTCATGTGTATTTTGCCAAACAATCTTCATTGCATTCTTATAATATTTTAC
• Tissue: pods
• Gene name: LI_gene_192723;
• Additional information: details;

Expression of Ll_transcript_350881

FPKM

• PAB: 0.8
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.3
• PS3: 0.2
• PW1: 0.5
• PW2: 0.3
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_350881

• Blastp: ABC transporter B family member 20 from Arabidopsis with 83.5% of identity
• Blastx: ABC transporter B family member 6 from Arabidopsis with 83.78% of identity
• Eggnog: (ABC) transporter(COG1132)
• Kegg: Link to kegg annotations (AT3G55320)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427682.1)
• Pfam: ABC transporter transmembrane region (PF00664.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;