| Id Trinity | TRINITY_DN52439_c1_g1_i22 |
|---|---|
| Name Transcript | Ll_transcript_350884 |
| Sequence | CGGGAATGCGTTTGAACGTTACACAACAAATTATTAGAAAACACACCTTTCACATTTTCCTCCATAAATAACCGTCTCCGACCCTCTCCTTCCACGCGCC ACTCCCTCACGAAGTCGTTAACTCTACGGCGACGACCGTGCCGGCGAACGCCAGGACGACGTCGTTTGCCGCAACACAATAATTCTTATTATAATAAAAT TATTTGAAATAACGATTTTGTGTGGATCTGGTTCGAGAAGAAGGAAATGATGGGATCGAGGGGATTATTCGGGTGGTCCCCACCTCACATACAACCTCTC ACTCCGGTTTCGGAAGTTTCCGAACCACCGGAATCTCCCTCCCCGTACCTTGACCCCTCGGCGGAGACATCCGCCGCGCAGCCGGTGGAGGTTGAGGAGG AGATGGAGGAGCCTGAGGAAATGGAGCCTCCGCCGGCTGCTGTTCCTTTCTCAGGGCTGTTTGCGTGCTCTGATCGCTTCGATTGGTTCCTCATGTGTGT TGGCTCTGTTGCTGCCGCGGCTCATGGCACTGCTCTTGTTGTTTACTTGCACTATTTCGCGAAAATTATACATGTTCTGCGGATGGATGGTTCGCAGGAC CAGTTTCAACGCTTCGCCGAGCTTGCTTTAATCATTGTTTACATTGCTGCGGGAGTTTTTGTAGCTGGTTGGATTGAGGTTTCATGTTGGATTTTGACCG GGGAGCGACAGACTGCAGTCATCAGATCAAAATATGTTCAAGTATTACTCAACCAAGATATGAGTTTTTTTGATACTTATGGGAATAATGGAGACATAGT GAGTCAAGTACTGAGTGATGTGCTGCTTATTCAATCTGCCCTTAGTGAAAAAGTTGGAAATTATATTCATAATATGGCTACATTCTTCAGTGGTCTTGTC ATTGGACTTATCAATTGTTGGCAGATTGCTTTGATAACGTTAGCCACAGGCCCATTTATTGTTGCTGCTGGAGGAGTATCAAATATATTCCTCCACAGGC TTGCAGAGAATATTCAAGATGCATATGCTGAAGCAGCAAGCATTGCTGAACAGGCAGTTTCCTATATCAAGACACTGTATGCATTCACAAATGAAACATT GGCCAAGTATTCATATGCAACATCCCTGCAAGCTACTCTCAGATATGGTATATTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACGTATGGACTT GCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGGTTCTTGGTTATTCATGGAAAAGCACATGGTGGTGAAATTATAACAGCTCTCTTTGCTGTAA TTCTGAGTGGCTTGGGGTTGAATCAAGCAGCAACAAATTTCTACTCATTTGATCAAGGACGAATAGCTGCTTATAGACTATTTGAGATGATAAGCAGGTC ATCCTCCTCTGTTAATCAAGATGGCACTACCCCCGATTCTGTGCAAGGAAATATACAGTTTCGGAATGTTTATTTCAGTTATCCATCTCGTCCTGAAATC CCTATATTGAGTGAATTTTATCTTACTGTACCTGCTAAGAAGGCTGTGGCACTTGTTGGCAGAAATGGCTCTGGAAAAAGTAGTATTATTCCACTCATGG AGCGTTTCTATGATCCTACATTAGGTGAAGTCCTTTTAGATGGTGAAAACATCAAGAATTTGAAACTGGAATGGTTGAGGAGCCAAATAGGACTAGTCAC TCAGGAGCCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATTGCATATGGGAGAGATGCCACCATGGATCAAATTGAAGAGGCCGCTAAAATAGCTCGT GCACATACATTTATCAGCTCGTTAGAGAAAGGTTATGACACGCAGGTTGGCAGGGCTGGTCTAGCCTTGAATGAAGAGCAGAAAATAAAACTTTCTATTG CGAGAGCTGTGCTTTTAAATCCATCTATCCTCCTGCTCGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGTCTGTTCAGGAGGCTCTGGATCT CCTTATGTTAGGGCGCTCAACAATAATAATTGCCAGAAGGCTTAGTCTTATAAGGAATGCTGATTATATAGCTGTTATGGAGGAAGGTCGACTTGTTGAA ATGGGTACTCATGATGAATTATTGACCCGGGATGGCTTATATGCAGAGCTTCTCCGACGTGAAGAGGCCGCAAAGCTTCCCAAAAGAATGCCTGCTCGTA ACTACAAGGATACTGCAGCTTTCCAAATTGAGAAAGAGTCTTCAGAAAGTCAGAACTTGAAAGAATCCTCATCCCCTAAATTGATGAAATCACCCTCTCT TCAAAAACTTTCTGCAGTATTTCAGCCTTCAGATGCCATCCTTAATTCACAAGAATCACCAAATGTTCAGAGCCCACCTCCTGAGAAGATGCCGGAAAAT TGTCAAACTTCGGATGCAGCAGATAAGGAGCCATCAATAAGAAGGCAGGATAGTTTTGAAATGAGACTACCCGAGTTACCGAAGATTGATGTTGAATCTA TATATCGGCAAACATCAAAAGGTTCTGACCCTGAATCCCCTGTTTCACCTCTTTTAACATCCGATCCTCAAAATGAACGTTCCCATTCACAGACTTTTAG CAGACCAGATAGTGGCTCTGATGATTTTTCAGTGAAAATGAGGGAAACAAAAAGTGCACAGCATCGAAAACAACCCTCACATTGGAGGTTGGCAGAGCTT AGTCTTGCAGAGTGGTTTTATGCTGTGTTAGGAAGCATAGGCGCTGCCATCTTTGGTTCTTTCAATCCCCTGCTTGCTTATGTTGTTGGCTTGGTAGTGA CAACTTACTATAGCATTGATGGAGCCCGCCACTTTAGAGGGGAGGTGGAGAAGTTGTGCTTGGTCATTGCTTGCATGGGCATTGTGACAGTTGTTGCCAA CTTTTTGCAGCATTTCTACTTCGGTATTATGGGGGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAACTGGTTGG TTTGATGAAGAAGAAAACAGTGCTGACAATTTATCAATTCGATTGGCCAATGATGCTACATTTGTGAGAGCTGCTTTTAGTAACCGGCTTTCCATATTTA TACAGGATAGTGCTGCAGTAGTTGTTGCTATTCTGATTGGTGTTTTGCTGCACTGGCGAATAGCACTTGTGGTTTTGGCAACACTTCCAATCCTCTGTGT TTGTGCGATTGCCCAGAAACTTTGGCTTGCTGGATTTTCGAGAGGCATACAGGAAATGCACAGGAAGGCATCTCTGGTTCTTGAAGACGCAGTCAGAAAT ATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGGTGATGGAGCTCTACAGGCTGCAACTAAATAAAATACTTACGCAGAGCTTTTTTCATGGGGTTG CCATCGGTTTTGGATTTGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTCTACTTTGGTACACTGCATTATGTATTAAAAATAGGTATGTAAG TCCAACCACTGCACTGAAGGAGTACATGGTTTTCTCATTTGCTGCATTTGCACTTGTGGAGCCTTTTGGGTTGGCTCCTTACATACTTAAGCGACGTAAA TCTCTCATTTCAGTGTTTGAAATTATAGACCGCGTGCCTAAAATTGACCCTGATGATAACTCAGCATTGAAGCCGCCCAATGTATATGGAAGAATTGAGT TGAAAAATGTTGATTTTTGTTATCCTTCTCGTCCAGAAATGTTGGTGCTCAGCAATTTTACTCTAAAAGTCAGTAGAGGACAAACAGTTGCGGTTGTGGG AGTGTCAGGGTCGGGAAAGAGCACTATAATATCTTTGATTGAGAGATTTTATGATCCAGTTGCTGGCCAAGTTTTACTAGATGGGAGGGACTTAAAGCTA TATAATTTAAGATGGTTAAGGAGCCACCTTGGTCTGGTTCAGCAGGAACCTATTATTTTCTCGACAACCATAAGGGAAAATATCATATATGCCAGGCATA ATGCCAGTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCAAATGCTCATCATTTTATTAGCAGCTTGCCTCATGGATATGACACTCATGTCGGGATGAG AGGTGTTGACTTAACCCCTGGGCAGAAACAGAGAATTGCAATTGCGAGGGTAGTGCTGAAAAATGCTCCTATCTTGTTGGTAGATGAAGCAAGTTCATCA ATTGAATCCGAGTCTAGCCGAGTGGTGCAAGAGGCTCTTGACACGCTAATAATGGGAAACAGGACCACTATTTTAATAGCGCATAGGGCTGCAATGATGA GGCACGTGGACAATATCGTAGTGCTTAATGGAGGACGGATAGTCGAGGAAGGAACTCATGATTCTCTTGCTGCAAAGAATGGTCTGTACGTCCGATTGAT GCAACCTCATTTTGGTAAGGCAATGCGTCAGCATCATCGGCTTCTTTAGGATGGAGTATGTGATGTTAGTAATTGCGCTACTAATGGTCATTTGCGGGCA TAGTTCTTCCTTCTTCCTGCCTGCATTGAATTGCTAGCTGGTGTCTTGTGCGCCCGATGGATCTTTCAATGAATGTCAGGTAGGAATGGTCGGTGGCAAC GGGAATGATGAAATCTTAGATTCGCACACGATTATTGGGATAGATTCTTTCGGAGGCAAACAGCTCTTAGACTAATGGTGTTTTATATCTCAGGAGGGTG GATTCAACACTAATTCTCTCATTGGACTTTAATTTTTTCACTCTTGCTAACTTACACGTGGATGATGAACTTATTCATAACTGTAGTTTTGTTTATTTTT TCTCTTTCAATTTGTGTAATTGTAGAAAATTTAGTTGCAAGAGTTGTTAACTTCTGTAAATATGATATAGCTATAGTTCAGAAGGCATTTCTTTTGCTGC TTCAGTCTCATGAGTGTTTTTCTTCTCTATTATTACAATGGATGCAAATTTTCATGTGTATTTTGCCAAACAATCTTCATTGCATTCTTATAATATTTTA C BLAST |
| Tissue | pods |
| Gene name | LI_gene_192723; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_350884
| Blastp | ABC transporter B family member 20 from Arabidopsis with 82.87% of identity |
|---|---|
| Blastx | ABC transporter B family member 6 from Arabidopsis with 83.64% of identity |
| Eggnog | (ABC) transporter(COG1132) |
| Kegg | Link to kegg annotations (AT3G55320) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419466.1) |
| Pfam | ABC transporter transmembrane region (PF00664.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |