Ll_transcript_348701

Id TrinityTRINITY_DN52449_c1_g2_i1
Name TranscriptLl_transcript_348701
SequenceGTGGTGGATATAAGGGTGCCGATGACGAAGTACATGGTGGGGATTCAGAAGGGTATTGTGGAGGTTATGGATGCATGTTTGAAGGAGATGAGGAAGACGA ATAAGGTTGACGTGGAGGATCTGACGGTGGAGAATGGTTTGTTCAAGTCGTTTGATGAGATTGTGAAGAGGCAGTTGGATCCAATTTGGCATACTCTGGG TAAGAAGACTAAGCAGCTCGTGTCGGACCTTAGGACCCTGAGAAAATTGTTGGATTATCTTGTCAGGTATGATGCAGTAACTTACTTGAAATATTTGGAC ACACTGAGAGTGTCGGAGAGTTTTCGATCTGTTTGGATATTTGCAGAGGCGAGCTATAAGATATTTGATTATGCAAAGAAACGTGTTTATCATCTAGTGA GATCAGATGGTATAAAATTAGATGGGTTGAGTAAGAGTGCCAAAAACAAAAAGAGAAAAGTTAAGGGGGATAACAAAGACACTGAAGAAGGAGTTGATGG TGCTTCATCAACAAATTCAAATGCTGGCTTAGTCTTGGAGGAAGTCTTGGAAGAAGCACCAAAGTGGAAGGTCTTACGTGAGGTTCTTGAGGAGGTAGAA GAAGAAAGACAAAAGCAAGGTGCATTGAGAGAAGAAGTGTTGGCTGAAGGTGAAGACACTGACAATGGCATTGTATTGGTTGCATGCAAAGATGAACGGT CGTGTTTTCAACTTGAAGAATGCATCACAAACAGTCCAAAAAAGGTCATGAGTGAAGAATGGAAGAAGTACTTGCTAAGCAAAGTACAGCTGCGTGACAT AGTGCATAATAAGAAGAATAAGCCAAAGGATCCCAAAGGTTTTGGGATCCTTGATGGAGTGACTCCCATAACACCCGCTCAAAATGCAGATACCAGCAGC ATTAGTAAGCAGGAGCATGATGCACTTCTGGCAGCAGCATCGGGACTAAAAGATTTTGCTAAAAATGATCATGTTGAAGATCCCTCTCTGCCTGATTTTG GTGGACGGGGTCGTGGAAAAGGAAAGAGAAAAATAGGGAGTAAAAATGGTCCTATCGTCGTTGATGGATCTGGAGTCCAGAACAGTAATAAAAAGGCATC AACAAGTGATAAATTTGGGAAATGTGATTCAAAAAATGAAGCCCACGTAGATGAAGCTAGTCCTGCCAGTTCTGGTAGATTTCATGAAATCATGCATGGT GGGACATCTGTAGACAACATAGTTCTTCGAAAACATACTAATACTGATGCTGCAGCTTTAAATGCGAAGCCACTACCTCCAGTACATTTTTATGCCATAG AAAGTGATCAGCCTATATTGGACATATTAAAGCCCTCTATTATCATTGTTTACCATCCTGACATGGCTTTTGTTAGGGAAATTGAAGTCTACAAAGCTGA TAACCCCTCAAAAAGATTGAAGGTATATTTTCTTTTCTATGAAGATTCTACTGAGGTTCAGAAGTTTGAGGCAAGTATACGTAGAGAAAATGGAGCATTT GAATCTTTGATTAGGCAAAAGTCTATGATGATGATTCCAGTTGACCAGAGTGGGCATTCTACTTTAGAGTCAGATTTAAATACTCCTCAAAACTCAATAA CCAGAAAAGCTGGTGGGAGAAAAGAGGCTAATAAAGAAATGCAGGTCATTGTGGACATGCGGGAGTTCATGAGCAGCCTCCCAAATGTTCTACATCAAAA GGGAATGCACATCATTCCTGTGACCTTAGAAGTCGGCGACTATATCCTATCACCATTAATTTGCGTGGAAAGAAAAAGTATTCAAGATCTCTTTATGAGC TTCACTTCAGGTCGTCTGTATCACCAGGTGGAGACAATGGTGCGATATTATAGGATACCTGTACTCTTGATTGAGTTTTCACAGGACAAGAGCTTTTCAT TCCAGTCTGCTAGTGATATTGGTGATGATGTGACACCAAATAGCATTATATCGAAGTTGTCCTTACTTGCCCTACACTTTCCTCGGCTAAGAATAATCTG GTCTCGGAGTTTGCATGCTACTGCTGAAATATTTGCTTCTCTGAAGGCAAATCAAGATGAACCAGATGAAACAAAAGCAATGAGAGTGGGTGTCCCCTCA GAAGAAGGGGTCGTGGAAAATGATGTGAGGTAAGTGCTTTTTCATAGTTTAAACTTGAAAGGTGTTTCCAGCAATGATGTGAAACCATATTAAAGAAGTT GAATGCTTGGTGTCTTGCATATAATTTATTGTAATGGTATGAAACAGTAACGAGTTGTTTTCTCATAGTCTCAGTGATATTAATTTTTGACATTTCTAAT GGAAAATATTGATTTGTGGGCTTATTTGTTTAGGCACTTCTTACATAAAATTAGAATAGCTACTACTACATTTGTAGCATTGCCAGGTCACAAACATGAA ACTTCCTTTGCCTATTAATATACAAGGGCTTCATGCCTCTACACATTAGCACATAAAATGTTAGAACTCGGGCTCAGACTCAGTCTTTCGTATCAAATTG TTTCATCAATGAATTTGTATGCACTGATTGTTTTTATTCATTTAGCATACTAATTTGTATATATACTCGTTGAGCCACAGAGCTGAAAATTACAACACAT GGGCTGTGGAGTTTCTTAGGAGACTTCCTGGTGTTACAGATTCAAACTACAGAACCATAATGGATGGGTGTAAGAGCTTGGCAGAACTTGCTCTTCTTCC TGTGGAGAAGCTTGCAGAATTAATGGGGGGTCATAAAGCTGCTCGGACTCTAAGAGATTTTCTTGATGCTAAATATCCAACTTTATTATGAGGCTAATTG GGGTATATACAAAATATACAACTTATTACTGTCGTCTATTAAGTGCCTTCCATTTGGTGGAAAACGGGTCAGCGAATTACTGATTATGTTTCTCACTCAT GTTCATTATTACTATAGTTTTAACAGTATTGTAAATTTGTAATACTTAATTATTTCTGTTCTAAATATGTATCCTCAAATTCAAATTTTATTTAAATTTC AAAGCATCATTTAACACTAAA BLAST
Tissuepods
Gene nameLI_gene_192799; 
Additional informationdetails; 

Expression of Ll_transcript_348701

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_348701
BlastpDNA repair endonuclease UVH1 from Arabidopsis with 65.65% of identity
BlastxDNA repair endonuclease UVH1 from Arabidopsis with 65.55% of identity
EggnogExcision repair cross-complementing rodent repair deficiency, complementation group 4(COG1948)
KeggLink to kegg annotations (AT5G41150)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421212.1)
PfamERCC4 domain (PF02732.14)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;