Ll_transcript_351165

• Id Trinity: TRINITY_DN52453_c0_g1_i20
• Name Transcript: Ll_transcript_351165
• Sequence: TTAAGAATCGGGTGCAGGAGATTGTAGATTTAAGTTATACCCACAATAAAAATAAAAATACTAACGTAAAAACAAATTTACATTTCACCTTCCAAACCCT GTGTTCGACGTCGTATATCCCCAACCAAACACACACCAATAAACGATCGCGTGTACTTATATGTTTTCTCCCATCCAAACCCAACACAACAACAAAACTA ACATTCATATTGCTTATCGCTCCATAGAACAACGTTGTTTCCATAGTCAATAGATCTCTTCATTCCACTCACAGTTTTTTTCTTCTGTTGGAATAAAATC TTAATATTTCTTAAGATTAATAGTTGGAACTGTAGCATAAGCTTTGTGTGTTTTTTCCGAAGGATGATTTTTTCAAGGATTGGTCGCTCCCTCTCACGTT CTTCTCGCGCCAGAAATTTGTTGCAGGGCGATGGTGTCTCCTATTCCTTCGTAGGAGAAGGGGGATTAGGGTTTTTGAGGGGTTACATTGCTCCTGCTAG CAATGGCTTCAATTCTAATTTGTCTGATTTTAAGTCCATTGGAGCAAACCCTAGGCTTCTCAGATTGTTTTCCAGTGAAGCCCCTGAGAAAAAGAATTAT GATAACTTCTCCCCCAAGGAAAAGAAGGAAGTTCCAAAGGGAGATGATTCAAAACAGGAATCTAAAGATGACTCGAACACAAAGACAGATGATCATGAAA ATTTGAAAGAGTTTTTCATGAAGCAATTTCAAAACATATTACCTTTATTGGTGTTGGGGGTATTCCTTACCTTTTCACTTGGTTCTAACGAACAACAGCA GATCAGCTTTCAGGAGTTTAAAAATAAGCTTTTGGAACCAGGCTTAGTAGACCATATTGTTGTTTCAAATAAGTCAGTTGCCAAAGTATATGTAAGGAGC TCTCCCCATAACCCAGCAGACAGTGAAGTTGTCCAAGGGACTCTCTCTGGACAAAGAACTGGTGGCCAATATATGTACTATTTCAATATTGGAAGTGTTG AGTCTTTTGAGGAGAAGCTAGAGGAAGCCCAAGAAGCGCTAGGCATTGACCCTCGTGATTATGTTCCTGTTACGTATTCTTCTGAGATTGTTTGGTTCCA GGAATTGTTGAGATTTGCTCCTACACTGGTACTTTTGGGAACTCTTCTCTATATGGGAAGGAAAATGCAAGGTGGACTTGGTATTGGTGGTCCTGGTGGT GGTATGGGTGGCGGTATGGGTGGCCGTGGCATATTCAGCATGGGGAAAGCCCCTGTTACCAAAGTAGACAAAAATGCCAAAAACAAGGTTTTTTTCAAAG ATGTTGCTGGTTGTGATGAGGCAAAGCAAGAAATTATGGAGTTCGTCCACTTCCTTAAGAGCCCAAAGAAATATGAAGAACTCGGTGCAAAAATTCCAAA AGGTGCTCTTTTGGTGGGTCCTCCTGGCACGGGTAAAACCCTTTTAGCAAAAGCAACTGCTGGGGAATCTGGTGTGCCATTTTTTTCTATATCTGGTTCG GATTTCATGGAAATGGTTGTTGGTGTTGGACCGTCTAGGGTGAGAAACTTGTTTCAGGAAGCAAGGCAGTGTGCTCCCAGTATAATATTTATTGATGAGA TTGATGCAATTGGTCGAGCAAGGGGTCGTGGAGGTCTTTCTGGTGGAAATGATGAGCGTGAAAGTACATTGAATCAATTGTTGGTGGAGATGGATGGTTT TGGAACCACTGC
• Tissue: pods
• Gene name: LI_gene_192829;
• Additional information: details;

Expression of Ll_transcript_351165

FPKM

• PAB: 7.4
• PNAB: 6.2
• PS1: 10
• PS2: 6.3
• PS3: 8.5
• PW1: 6.5
• PW2: 6
• PW3: 4.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_351165

• Blastp: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial from Arabidopsis with 65.82% of identity
• Blastx: ATP-dependent zinc metalloprotease FTSH 3, mitochondrial from Arabidopsis with 69.27% of identity
• Eggnog: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
• Kegg: Link to kegg annotations (AT1G07510)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413392.1)
• Pfam: FtsH Extracellular (PF06480.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;