Ll_transcript_351176

• Id Trinity: TRINITY_DN52453_c0_g1_i29
• Name Transcript: Ll_transcript_351176
• Sequence: CCGAACCAAAGAAAGCGTTAAACCCCCGCACTTGCTACGAGTAACGTGCCACGTGTTTTCTCCATTCGATTGAACAAACAACATTGATATTTTAGTATTA TCATCATCGTTTCGTTTATCAGGCCGCCATATAATAACGTTTCTTCCCATTCATACTTTAGATCTATTCATTCAATCCACTGTTTTGTTTTGTTGGAATT AAATTTCATTTTCAGATAAGGTTATTACTGTGTTTCTCCGAACTATGATTTTTTCAAGAATTGGCCGATCCCTCTCTCGTTCTTCTCGCGCTAAAAATTT GTTGCAGGGCGATGGAAGATTCGGAACCCTAGTTGGAGCTCCGCGTACTAATGGTGAATCCTTTTCTAACGGAGGAGGATTTTTGAGGGGTTACATAGCT CCTGCCAACAATTGCTTCGATTCCAATTTGTCTGATTTTAAGTCTATTGGACCAAACCCTAGGCTCATTCGCTTGTTTTCCAGTGAATCCCCTAAGAAAA AGAATTATGAGAACTTCTACCCTAAAGAAAAGAAGGAAGTTCCGAAGGGAGACGATTCAAAACAGGAATCTAAAGATGACTCAAATACAAAGACAGACGA TAATGAAAATTTGAAAGATTTTTTCATGAAGCAATTTCAAAACATATTACCTTTATTGGTGTTGGGGGTATTTCTTACGTTTTCACTCGGTCCTCGCGAA CAACAGCAGATCAGCTTTCAGGAGTTTAAAAATAAGCTTTTGGAACCAGGCTTAGTAGACCATATTGTTGTTACAAATAAGTCAGTTGCCAAAGTATACG TAAGGAGCTCTCCCCGTAACCAAGCAGACAGTGAAGTTGTTCAAGGGACCCCCCCTGGACAAAAAACTGGTGGCCAGTATACGTACTATTTCAATATTGG AAGTGTCGAGTCTTTTGAGGAGAAGTTAGAGGAAGCTCAAGAAGCGCTAGGCATTGACCCTCATGATTACATTCCTGTTACATATTCTTCTGAAATGGTT TGGTTCCAGGAGTTGTTGAGATTTGCTCCTACACTGATGCTTTTGGGAACTCTTCTCTATATGGGAAGGAAAATGCAAGGGGGACTTGGTGTTGGTGGTC CTGGTGGTGGTAAGGGCGGTCGTGGCATATTCAATATAGGAAAAGCCCACGTTACCAAAGTAGACAAAAATGCTAAAAACAAGGTTTTTTTCAAAGATGT TGCTGGCTGTGATGAGGCAAAGCAAGAAATTATGGAGTTTGTCCACTTCCTCAAGAGCCCAAAGAAATATGAAGAACTTGGTGCAAAAATTCCAAAAGGT GCACTTTTGGTGGGTCCTCCTGGCACAGGAAAAACCCTTTTAGCAAAAGCAACTGCAGGGGAATCTGGTGTCCCCTTTCTTTCTATATCTGGTTCTGATT TCATGGAAATGTTTGTTGGTGTTGGACCATCCAGGGTTAGAAACTTGTTTCAGGAAGCAAGGCAGTGTGCTCCCAGTATAATATTTATTGATGAGATTGA TGCAATTGGTCGAGCAAGGGGACGTGGAGGTCTCTCTGGTTCAAATGATGAGCGCGAAAGTACGTTGAATCAATTGTTGGTGGAGATGGATGGTTTTGGA ACCACTGCTGGGGTTGTTGTACTTGCAGGAACAAATAGACCGGATATCTTAGATAAAGCTCTACTTAGGCCTGGGCGATTTGACCGCCAGGTAACCATTG ATGAGCCTGATATTAAAGGCCGTGATCAGATATTTCAGATCTACTTGAAAAAGATCAAACTTGACCATGAACCTTCATATTTTTCACAAAGGCTTGCGGC TCTTACCCCGGGATTTGCTGGTGCAGACATTGCCAATGTTTGTAATGAAGCTGCTCTGATCGCTGCAAGAGGTGAGCAAACACAAGTGACAATGGAACAT TTTGAGGCAGCTATTGACAGGATCATTGGTGGTCTGGAGAAGAAGAACAGGGTAATAAGCAAGCTTGAAAGGCGTACTGTTGCTTATCATGAATCAGGCC ATGCTGTTGCAGGCTGGTT
• Tissue: pods
• Gene name: LI_gene_192829;
• Additional information: details;

Expression of Ll_transcript_351176

FPKM

• PAB: 6.3
• PNAB: 7.5
• PS1: 6.9
• PS2: 3.9
• PS3: 6.4
• PW1: 5.6
• PW2: 6
• PW3: 4.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_351176

• Blastp: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial from Arabidopsis with 73.84% of identity
• Blastx: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial from Arabidopsis with 77.08% of identity
• Eggnog: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
• Kegg: Link to kegg annotations (AT1G07510)
• CantataDB: Link to cantataDB annotations (CNT0000340)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454080.1)
• Pfam: FtsH Extracellular (PF06480.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;