Ll_transcript_351149

• Id Trinity: TRINITY_DN52453_c0_g1_i5
• Name Transcript: Ll_transcript_351149
• Sequence: ATAACATACACATTTCTTTCTTTCTTCTTCCATCTTCATCTTCAGAATCACAATAACCACTTTTACACTCAGTTTTAAGGATTAAAATGCAATTATAAAT GTAAATAGAAGTATATAATTGTCTTTTTTGTTTTGCTTCCTGCCTTGTTTTAATGCGACTCTTATTTTCTTAGTAAAGAATTCTATGAATAGGTAACATA AGATACAGGGTCCTTATTAGGATTGTCATTGAATAAATATTTTTTGGTTGAGTACATTTTTTCCCCATTATTTTTACTAGTTTTTATTCAATGAATGATA ACAACCATTGACATGTTGTGAGGAAAGAAATGGTTGAAATGTGTTTGGCAAGAATAAAATTAGAATAGAAGCCAACGTGTGGCTTTGTTGACCTCAGAGT CCTATATGCCAAACCAAACACACCGCGTTTACTGCTACTAATGTGTTATGTGTTTTCTTCCATCCATCACACAGACACCAAAAACAACATCATTAATCTT GTTTTCGTTTATCAACCCATATAACTACCTTGTTTTTCTTCTATATTACATTTATTCATTCATTCCAATCACTGTGTTTTCTAGCTGCAGCATAATAAGC TTCCTTGTTTCTCCAAAGGATGATTTTTTCAAGGATTGGGTCTTCCCTCTCGCGTTCTTCTCGCGCCAGAAATTTGTTGCAGGGGAATGGGAAATTCGGA ACCCTAGTCGGAGCGCCGCGTATGAATGGTACCTCCTATTCCGACGGAGGAGAAAAGGGATTAGGTTTTTTGAGGGGTTACATAGCTCCGGCCAGCAATG GCTTCAATTTCAATTTCTCCGATTTTAAGTCAATTGGAGAAAGTACTAGGCTTCTTCGATTGTTTTCCAGTGAAGCTCCTAAGAAAAAGAGTTATGAAAA CTTTTTCCCCAAGGAAAAGAAGGAAATTCCTAAGAGAGACGATTCAAAACAGGAATCTAAAGATGACTCGAAGAAAAAGACAGGTGACCGTGAAAAGTTT GAAGAGTTTTTCATGAAGCATTTTCCAAGCATAGTACCTTTATTGGCCCTGATGACATTTTTTACCCTTTCACATGGTCTTCCCGAACAACAACAGATCA GCTTTCAGGAGTTTAAAAATAAGCTTTTGGAACCAGGCTTAGTAGATCATATCGTTGTTTCAAATAAGTCAGTTGCCAAAGTATATGTAAGGAGCTCTCA TCGTAACCTAGCAGACAGCGAAGTTGTCCAAGAGACTCTCCCTGGAGAAAGAAGTGGTGGCCAATATATGTATTATTTCAATATTGGAAGTGTTGAGTCT TTTGAAGAGAAGTTAGAGGAAGCGCAAGAAGCTCTAGGCATTGATCCTCATGATTATGTTCCTGTTACATATTCTTCTGAAATGTTTTGGTTCCAGGAAT TCTGGAGATTTATTCCTACATTGATATTTTTGGGAACTGTTCTCTATATGGGAAGGAAAATGCAAGGCGGGCTTGGCGTTGGTGGTCCTAGTGGCGGTAA GAGTGGTAGTGGCATATTCAATATAGGAAAAGCCCATGTTACCAAAGTAGACAAAAATGCCAAAAACAAGGTTGCCATATTTCTTTTATAAATAAGATGG TAGTTGCTTTTGTATTCAACTCTTGACAGTATATTCTCCAATTGCCTTTGTTATTGTTCATTTTAATATTTTTTTAGTGGAGGGAGTAGGAGTGGTGGTA TATAACTTGGCCACAAGTTCATTTAAGAGATGATGTTTCGTATAAATTTGTATTTGTTCAGGTTTTTTTCAAAGATGTTGCTGGCTGTGATGAGGCAAAG CAAGAAATTATGGAGTTTGTCCACTTCCTCAAGAGCCCAAAGAAATATGAAGAACTTGGTGCAAAAATTCCAAAAGGTGCACTTTTGGTGGGTCCTCCTG GCACAGGAAAAACCCTTTTAGCAAAAGCAACTGCAGGGGAATCTGGTGTCCCCTTTCTTTCTATATCTGGTTCTGATTTCATGGAAATGTTTGTTGGTGT TGGACCATCCAGGGTTAGAAACTTGTTTCAGGAAGCAAGGCAGTGTGCTCCCAGTATAATATTTATTGATGAGATTGATGCAATTGGTCGAGCAAGGGGA CGTGGAGGTCTCTCTGGTTCAAATGATGAGCGCGAAAGTACGTTGAATCAATTGTTGGTGGAGATGGATGGTTTTGGAACCACTGCTGGGGTTGTTGTAC TTGCAGGAACAAATAGACCCGATATCTTAGACAAAGCTCTATTAAGGCCTGGGCGATTTGATCGCCAAATATCCATTGATAAGCCTGATGTTAAAGGCCG TGAGCAGATATTTCAGGTCTACTTGAAAAAGATCAAACTTGACCACAAACCTTCATATTTTTCACAAAGGCTTGCGGCGCTTACTCCGGGATTTGCTGGT GCAGACATTGCTAATGTTTGTAATGAAGCTGCCTTGATCGCTGCAAGAGGTGAGCAAAAACAAGTGACAATGGAACATTTCGAGGCAGCTATTGATAGGA TCATTGGTGGTCTGGAGAAGAGGAACAAGATAATAAGCAAGCTTGAAAGGCGTACTGTTGCTTATCATGAATCAGGCCATGCTGTTGCTGGCTGGTTCTT GGAACATGCCGA
• Tissue: pods
• Gene name: LI_gene_192829;
• Additional information: details;

Expression of Ll_transcript_351149

FPKM

• PAB: 6.3
• PNAB: 3.8
• PS1: 4.5
• PS2: 2.2
• PS3: 2.5
• PW1: 10.5
• PW2: 6.6
• PW3: 2.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_351149

• Blastp: ATP-dependent zinc metalloprotease FTSH 8, mitochondrial from Oryza sativa with 92.13% of identity
• Blastx: ATP-dependent zinc metalloprotease FTSH 8, mitochondrial from Oryza sativa with 92.42% of identity
• Eggnog: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
• Kegg: Link to kegg annotations (4339002)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448616.1)
• Pfam: ATPase family associated with various cellular activities (AAA) (PF00004.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;