Ll_transcript_348613

• Id Trinity: TRINITY_DN52460_c2_g5_i3
• Name Transcript: Ll_transcript_348613
• Sequence: GGGAAAGAGCACTCAATCCAAAAAAACACAAGTAACAAAGTGTTTCACTTCCTCACAGAAAACACAACCAACAAAAATCACATTCATGGCTTTCTTTTTT TACTGCAACTATTTTTAGCTTATTCAGCCATAGATCCTGAAACTGAAGAACAACCCTTAAAAGTGTTCAAGTTCTTTACTTTTTGTAACAAGCAACAACA AAAATCACATTCATGGTTTCATTCTTTCACTGCAACTACTTGGAGCTTAACAAGCCACAGATCCAGAAAGTAAAGGACAAATTTTATAGATTCTAGGTGG GTTTTGAGAATAAAGGTGTTAGCTTTTGAAGAAAACTGTAGTTGGTTTTGTGGGCAGTGATATTTGTTGTTCTTGTTTCTTTTGTTAGATGAAGGCCATG CCCTTGCCTTTTGAGGAATTTCAAGGGAAGGGGGTGTTTGATTTTTGTTCTGGTGGGAACTGAACCCACTTCTGTTCTTGAATCCAGAAGAAGCCCCAAT CCTTCTTTATCCTCTTCCACAATGTCCTCTTCTCTTGGCAGTAACAACAACACTGTTGCAGCCACAACCCTCTCAGAGAATCCACCACAAGCATCCTTGG AAACGAGCACTGAAAAATGTGGTATGAGGGTGGAGGATTGGGAGGGTCAAGATCAGTCTATTATGAGGTTAATCATGGGTGATGTTGAAGACCCTTCCGC AGGTTTGAGCAAGCTCTTCCAAACCGGTGGTTTCGGGTCTCAAAATGTTGATTTCAATGGAGGTTTTGGTGTTGTGGACCAAGGGTTGAATATGGTAGGT ATTGTTGACCCTTATGTGCAAGGGAATTACCCTGGCTTCCCATTCCTTGAGAATATAGGTGGTCACAATCCGAAGACTGGTTCTTCGTCTGTCTCGGAAT CAATTTCTGTTTCTGCTAACAATCCGTTGTTGGTTTCATCACCCCCTGGTGTGTTTAATTCTCAGCAGCATCAGCCGGTGATTGGTCTAGTAGACGAGAA GCCTCAACTTATCAATCCTCGGTTGCTGTTAAACCAGAATCAAGTTCAGTTCTCAGAGAACCCTTCTTTGTTTGTGCCATTGGCATACTCTCAAATGCAA GAGCAGGAAGGTTTCCCTCAGCATAGAGCGAAACGGCCTTTGTCTGACACTGTTGGTCATGACAATTACCAGGTTCCGAGGTTACCCCGTTTGGACTTTG GGCAAGAGCTACTTGCTAGGGGACAGCAAACACAGCATCCGTTGTTTCCTTATCGGCATCTGCAACAGAAGCTACAATCATTGGTTGTGCCATCTGCGAA ACAGGAGAAGGTGAATTCCACTGGAGATGATGCAAGCAACCAGCTTCAGCAGAGTATATTTGACCAGCTATATAAAACTGCTGAGCTGATAGAAGCTGGT AATCCGGTACTTGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAGTTGGTAAGCCTTTTCAGAGGGCTACTTTTTACATGAAGGAGGCCT TGCAGTTACTGCTCAATTCGAACATTCACAATTTTTTTGCTTTCTCACCCGTCAGTTTCATATTCAAAATTGGAGCTTACAAGTCATTTTCTGAGATATC ACCGGTTCTTCACTTTGTCAACTTCACTTGCAATCAAGCGCTCATCGAAGCTATGGAAAGGTTTGATCGAATTCATGTTATTGATTTTGACATCGGGTTT GGAGAGCAATGGTCATCTTTTATGCAGGAGCTTGCCTTAAGAAATAATGGTGCAACTTCGCTTAAAATTACTGCTATTGTAACTCCCTCCACTTGCGACG ATGTTGAGCTCAATTTTATCCGAGAAAATCTGAACCAATACGCCAAAGAAATTAACATGTCGTTTGAGCTCAATTTTCTGAGCATTGAATCACTGAACTC TTCTTGTCCTCTGGCTGGTCAGTTCTTTGATAATGAGGCAATTGCTGTGAATTTACCACTTTCTTCTTTCACAAATTACCCGTCATTGTTTCCTTCAGTC CTTCGCTTTGTAAAGCAGCTTAGGCCAAAAGTGGTGGTCACTTCGGATAGAAATTGTGACCGAATCGATGTACCATTTTCCACCAATGTAGTCCATGCTC TTCATTGTTACTCAGCCTTGCTTGAGTCACTCGATGTGGTTAATGTGAGCCCAGATGTCCTCCAAACTATTGAGCGGCATTTCATCCAACCAGCCATTAA GAAAATTGTATTGGGCCACCACCACTCACCGGAAAAGTTACCTCCTTGGAGGAACCTGTTTCTTCAAACCGGGTTTTCTCCATTCACATTTAGTAACTTC ACAGAAGCTCAAGCAGAATGTTTAGTGCAGAAGGCACCGGTGCGGGGATTTCAAGTGGAGAGAAGGAACTCATCTCTTGTGCTATGCTGGCAGCGGAAAG AACTTATCTCAGTTTTGACTTGGCGATGTTGAGCAGCTGCGCTTTAACGTATATTTTTAAAGATGCAGGCATTTCACTCTTGGTATCCCGATTCTCACCG GTGGCATTTAGTAACTCTACTGAGTACAAAGCAGACGTGTCCGGGAAGAGGCGGTCTTCTCTTGTTCACTATTTTCTTGTTCTATGCTGGCAAAGGAAGG TTCTCATCTCAGTGAGGCAAATTGCGCATTTGACTGCTAACTAATTTTAAAATTCGAAGGTGCTTCGTAATTAACTGCTTCTGTTGATCTATAGAATTTG CCTTTGCTATGGTTATATGCTAATTGTCTATGTTTTAGATTCTTTCTATTGAAGTAAACATCTTAATTAGCACCTAAATCCCAATTTATGTGGTTTATCT TCAATGCAGTGTCTTTCAGTTTCAGCAGTTGATTCATGCATTTTTCCTTAATTGTTCTTTAATTACTAGAAACTAACACAAATGACAAATCACTCTGAAT CCATGACAAATCTTTCCTGGTTGTTAGATTCGCAGTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTATTTTTT
• Tissue: pods
• Gene name: LI_gene_192902;
• Additional information: details;

Expression of Ll_transcript_348613

FPKM

• PAB: 3.7
• PNAB: 8.1
• PS1: 11.9
• PS2: 6
• PS3: 8.2
• PW1: 5.4
• PW2: 6.6
• PW3: 5.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_348613

• Blastp: Scarecrow-like protein 6 from Arabidopsis with 54.82% of identity
• Blastx: Scarecrow-like protein 6 from Arabidopsis with 54.82% of identity
• Eggnog: Scarecrow-like protein(ENOG410YANM)
• Kegg: Link to kegg annotations (AT4G00150)
• CantataDB: -
• Mirbase: bdi-MIR171a (MI0011559)
• Ncbi protein: Link to NCBI protein (XP_019464917.1)
• Pfam: GRAS domain family (PF03514.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;