| Id Trinity | TRINITY_DN52461_c0_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_349071 |
| Sequence | GACAAAAACAAATTATGGGTCCCTTTACTTTTATTGCAGTTTGCATGTCAATTTGGGTACTCATTTCCCTTTTCTCCTTCACTTCTGAACTTTCTAAAGT TCTAATCTTTATGCTAAGCTCTACCTTTTGCTTCTAATGTTTGATGCATGGTGTTAGTTTTTTCTGCTGAAGTCTACATTGTGCTAAAGGAAGTGGTTTT GGTTATGTCAGTTATGATTTTGAAGAATGGTTGTTGGGTTCTCTTGGTTTTGGATGTATGTCCTTCACTTAGTGTGAATTGAAGAGCTTAAGGGCTTAAA ATATCTTCCTTTTTTGGAGATATATCTTGATTCTACTCTAAATTGCTGTTTTCTTTTACAAGAAGGGTATTTAGCATCTAAATTTTACTTTTTGTTGGTG GGCCTGAAAGGTAGTTGCTATCATTTTGAATTTAGTAGAGTGAAAATTCCTTTTCTGTCTTCCTTGAGTGTGAACCACTCATAGCTAAACACTCACTTGT TCATAGAAGACAATGAAGCTCTTTAGCTTTTTAGTGTTATCCTTATCTTTCTTCTCAGTTACGGGGCAGCTACATTCCCGGGACATATTAGCATTGCTGG AATTTAAGAAAGGCATCAAGCATGACCCTACTGGTTATGTCCTCAATTCTTGGAATGAGGAATCCATCGACTTTGATGGATGCCCGTCTTCATGGAATGG AGTTCTTTGTGATGGTGGTAATGTTGCTTGGGTTGTCCTTGATAACCTAGGTCTCTCTGCCGAAGCTGATTTGAGTGTTTTTTCTAACCTCACAAAGCTT GTGAAACTCTCCATATCCAACAATTCCATATCAGGAAAACTACCGGACAGCATTGGTGATTTCAAAAGCCTTCAATTCATGGATATTTCCAATAACCTCT TTTCTTCTTCCTTACCATCGGGAATTGGTAACTTAGGTAGCTTGAAGAATCTGTCATTGGCCGGAAACAGCTTCTCTGGCCTAATTCCTGACACCATTTC CAAAATGGATTCTATCCAGTCTCTGGACTTGAGCTGCAACTCCTTTTCCGGAGCACTGCCAGCATCATTGACAAAGCTGAAAAGCCTGTTATCTCTTAAC TTGTCTCATAACAGATTCACTGGAAATATCCCCAAAGGTTTTGAGCTGATGTCTTCTCTCGAAAAACTTGACTTGCATGGGAATATGCTTGGTGGTCATT TAGATGCTGAATTTATTCTTTTATCAAGTGCCAGCTATGTTGATTTCAGCGACAATGGGCTTGATAGTTCTGATTCCGAGAGGCAGAAATTTCTACCACG AATATCTGAAAGTATTAAGCATCTGAATCTAAGCCACAACCTGCTAACTGGGACATTGGTTAGTGGAGCCGAGCAACCGGTGTTTGAAAATTTGAAGGTG TTGGACCTCAGCTACAATAAACTGGACGAAGAATTGCCTGGATTTGATTTTGTATATGATCTCCAGGTCCTTAAGCTTAGCAATAACAGATTTTCAGGAT TTATTCCTAACGGCCTACTAAAAGGAGACTCTTTGGTTTTAACTGAACTCGATTTGAGTGCTAACAATCTCTCAGGTCCGCTAAGTATAATTACATCAAC AACTCTGCATTTTCTTAATCTCTCGTCAAATGGATTCACTGGTGAGCTGCCACTGCTGACTGGAACCTGTGCTGTACTTGATCTTTCAAACAACAAATTT GAAGGAAATTTGACCAGGATGGTGAAATGGGGGAACATAGAATATCTTGATCTCAGTGTAAATCATTTAACAGGGAGCATCCCTGAAGCAACTCCTCAAT TTTTGAGATTGAATTATTTGAATCTATCACATAATTCTCTTAGCAGCTCCCTCCCAAGAGTCTTAACACAGTATCCAAAGCTTAAAGTGCTTGACATTAG TTCCAACCAGTTAGATGGACTACTTCTAGCTGATCTGCTCGTAATGCCTACTTTGCAAGAGCTCCACCTTGAAAATAATATGATCTCTGGCAGCATTAAC TTATCATCTTCTACTGGTCATTCTGATCTTCAGATTCTCGACCTTTCTCACAACCGGTTTAATGGCTATTTTCCTGATCAGTTTGGGTCATTAACTGGTA TGAAAGTTCTCAATATCGCTGGAAATAATTTTTCTGGCTCTCTTCCAACCACTATTGCTGACATGATTTCACTAGAAACCTTGGATATGTCAGAGAATCA CTTCACTGGTCCTCTACCGAATAACATGCCGAAGGGCCTCAACAACTTTAATGTTTCACAAAATGATCTGTCTGGAGTTGTTCCAGAAGATCTTAGAAAG TTCAATAGTTCTTCTTTCTTTCCAGGGAATGCTAAGTTACATTTTCCAAATGGTCCTCCTGGATCAACTGCTTCATCACCTGAAAGTTCCAAGAGGAAAC ATATGAACACTATCGTTAGAGTAATAATTATAGTATCATGTGTGGTTGCTCTCTTCGTATTAATCTTGCTTGCTATCTTTATACACTACATATGTATATC AAGATCTTCACCAGAATATGATACAAGTAAAGATATCCACGGGCGTGCTCAACCAATCATCTCTGGCCCCATCCCTGTTCGTACATCAGAAAGGGGTGGT GCTCTGGTTGTATCAGCTGAGGACCTCGTGACCTCACGTAAAGGATCACCGTCAGAGGCAATCAGCCCAGATGAAAAATTGGCAGCTGTAAGTGGTTTCT CTCCATCTAAAGCTAGCCGCTTTTCGTGGTCACCAGAGTCTGGTGATTCACTTACTGCTGAAAATCTTGCAAGGCTAGACACAAGATCCCCAGATAGGTT GGTCGGAGAGCTGCATTTTCTTGATGATACAATAGCATTGACACCCGAGGAGCTGTCAAGGGCTCCGGCTGAAGTTTTGGGCAGAAGCAGTCATGGTACT TCTTACAAAGCAACTCTGGACAATGGTTTGTTATTGAGAGTGAAGTGGTTGAGAGAAGGAGTAGCGAAACAAAGAAAAGAATTCGTTAAAGAGATTAAAA AGTTTGCAAACATAAGGCATCCTAATGTTGTGGGGCTGAGAGGATATTATTGGGGCCCTACGCAGCACGAGAAGCTTATTCTTTCAGATTACATCTCACT AGGAAGTCTTGCAAGTTTTCTATATGATCGACCAGGAAGAAACGGTCCACCACTAACATGGGCACAGAGGCTAAAAATAGCAGTTGATGTAGCACGTGGC CTGAACTATCTCCATTTTGATCGTGCTGTTCCTCACGGGAACCTCAAAGCTACAAATGTGTTGCTCGATACCGCTGACATGAATGCACGAGTTGCTGATT ACTGCCTGCATCGACTTATGACTCAAGCTGGTACTACCGAACAGATTCTTGATGCAGGGGTGTTGGGATATCGTTCACCCGAGTTAGCTGCGTCGAAGAA GCCAATGCCATCCTTCAAATCAGATGTTTACGCTTTTGGAGTGATACTTTTGGAACTTTTAACCGGAAGGTGTGCTGGTGATGTGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_192905; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_349071
| Blastp | Probable LRR receptor-like serine/threonine-protein kinase At4g20940 from Arabidopsis with 70.93% of identity |
|---|---|
| Blastx | Probable LRR receptor-like serine/threonine-protein kinase At4g20940 from Arabidopsis with 70.93% of identity |
| Eggnog | leucine Rich Repeat(COG4886) |
| Kegg | Link to kegg annotations (AT4G20940) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440111.1) |
| Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |