Id Trinity | TRINITY_DN52461_c0_g1_i5 |
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Name Transcript | Ll_transcript_349060 |
Sequence | GTAAAATACTGGGTTAATCAATTGAATATAATATCTATGTATGGGTAATGTAAAATTTTATATATAATCATTATATTGCTGTTATATAAGAATAAATGAT AATTGAAAATAAATCATTTCTTACAGAAAAAAACTCTTTTACTGCAAGTCTTTTTCTCTAATTAAACACTCCTTTTTGGGTTGAAGAAAAAGATCTTCAT CCTTCAATCTAAGCTTCTAAGAATCAAAAATAAATTCTGGGTCCCTTTCCCTTTATTGCACTGTGGATGTCAATTTGGGTACTCATTCTTCTTTTCTCCA CTAGTTGTTTGTAGCTACATTAACTTGTAGAGTTTCTGAAGTTCTAATCTTTGTATTAAGCTCTAACTTTCTGCTTCTAAAGTTTGATACTTGGTGGTAG TGGTTTGCTGAAGTTTTCATTGTGCTAAAGGAAGTGGTTTAGGGTAGGTAACTGGTGGTTTTGAAGAATGGCTGTTGGTTATGTAGTTTTTGGATGTAAA TATGTTCTTCACTTAGTGTGGATTGAGGACCTAAGTTCTCTTCTTTTTGGAGGCTGAGCTTGATTCTACTCTAAATTGGTGCTTTCTTTTAAAAGGGTAT CATGGTATCTAAATTGTACTTATTTGTTGGTGGGTCTGGAAAGTTTTTTCTATCATTTGAACTATAAGATTGAAAGCTCCTTTTCTGTTTTCACTTGAGT GTGAACCATACATAGCTAAACATTGACATATTCGTAGAACAAAATGAAGCTCTTTAGCCTTTTAGTGTTATCATTATCATTTTTCTCGGTTATGGGGCAG CTACCATCACAGGACATTTTAGCATTGCTGGAATTTAAGAAAGGCATCAAGCATGACCCTACTGGTTATGTCCTCAATTCCTGGAATGAGGAATCCATTG ACTTTGATGGATGCCCATCTTCATGGAATGGAGTTCTGTGTAATGGTGGTAATGTTGCTGGTGTTGTCCTTGATAACCTAGGTCTCTCTGCTGACGCCGA TTTGAGTGTTTTTTCAAACCTAACAAAGCTTGTGAAACTCTCAATGTCCAACAATTCCATATCAGGAAAACTACCTGACAACATTGGTGATTTCAAAAGC CTTCAATTCCTGGACATCTCCAATAACCTCTTTTCTTCATCCTTACCGCCGGGAATTGGTAACTTAGGTAGCTTGCAGAATCTGTCACTGGCTGGAAATA ACTTCTCTGGCCTAATTCCAGACACTATTTCAAAAATGGCTTCTATCCAGTCTTTGGACTTGAGCCGAAATTCCTTTTCCGGAGCACTGCGAGCATCATT GACTAAGCTGAAAAGCTTGGTCTCTCTTGACTTGTCTAATAATGGTTTGACTGGAAAAATTCCCGAAGGTTTTGAGCTGATGCCTTCTCTTGAAAAACTT GACTTGCATGGGAATATGCTGGATGGTCATTTAGATGCCGAATTTATTCTTTTATCAAGTGCGAGCTATGTAGATTTCAGCGATAATAGGCTAGTAAGTT CTGATTTTCAGAGGCAGAAATTTCTACCGCGAATATCTGAAAGTATTAAGCATCTAAACCTAAGCCATAATCTGCTTACTGGGACATTGGTTAGTGGAGC TGAGCAACCAATTTTTGAGAACTTGAAGGTGTTGGACCTCAGCTACAATAATTTGGATGGAGAATTGCCTGGATTTGATTTTGTATATGATCTCCAGGTC CTTAAGCTTAGCAACAACAGGTTTTCAGGATTTATTCCTAATGGCCTACTAAAAGGTGACTCTTTGGTTTTATCTGAACTGGATTTTAGTGCCAACAATC TTTCAGGGCCACTAAGTATAATTACTTCAACAACGCTGCATGTTCTTAATCTCTCGTCAAATGGATTCACCGGTGAGCTGCCACTACTGACTGGAAGCTG CACCGTACTTGATCTGTCAAACAACAACTTCGAAGGAAATTTAACCAGGATGGTGAAATGGGGGAACATAGAATATCTTGATCTTAGTGTGAATCATTTG ACAGGGAGCATCCCCGAGGAAACTCCTCAATTTTTGAGATTGAATTATTTGAATCTATCCCATAACTCTCTTAGCAACTTTCTACCAAGAGTCTTAACAC AATATCCGAAACTTAGAGTGCTTGACATTAGTTCCAACCTGTTAGATGGGCTACTTCTAGCTGATCTGCTCGCAATGCCTACTTTGCAAGAGCTCCATCT TGAAAATAATATGGTCTCTGGCAGCATTAATTTATCATCTTCTACTGGTCATTCTAATCTTCGGATTCTTGATCTTTCTCACAACCGGTTTAATGGCTAT TTTCCTGATCAGTTTGGGTCATTACATGGCATGGAAGTTCTCAATATTGCTGGTAATAATTTTTCTGGTTCTCTTCCAACTGCCATTTCTGACATGATTT CTCTAGAATCCTTGGATATATCAGAGAATCACTTCACTGGCCCTCTACCAAATAACATGCCGGAGGGGCTCAATAACTTTAATGCATCTCAAAATGATCT GTCCGGAGTTGTTCCAGAAGATCTTACAAAGTTCCCTACTACTTCTTTCTTTCCCGGGAATGCTAAGCTACGTTTTCCCAATGTTCCTCCTGGAAAAACC GCTCCACCACCTGAAAGTTCCAAGAAGAAGCATATGAACACTATTGTTAAAGTAATAATTATAGTGTCATGTGTGGTTGCTCTCTTTATATTAATTTTGC TTGCTATCTTCATACACTACATACGTATATCAAGATCTTCACCGGAATATGATACAAGTAAGGATATCCACATACGTACTCAACCAATCATCTCTGGCCC TGTCCCCGTTCGTACATCAGAAAGGGGTGGTGCTTTGGTTGTATCGGCTGAGGAGCTTGTGACCTCACGTAAAGGATCACTGGTTGAGGCCATCAGCCCC GATGAAAAAATGGCAGCTGTAACTGGTTTCTCCCCATCTAAAGCCAGCCACTTTTCATGGTCACCAGAATCTGGTGATTCATTTACTGCTGAAAATCTTG CAAGGCTAGACACAAGATCCCCGGATAGGTTGATTGGAGAGCTGCATTTTCTTGATGATACAATAGCATTGACACCCGAGGAGCTGTCAAGGGCTCCAGC CGAAGTTTTGGGCAGAAGCAGTCATGGTACTTCTTACAAAGCAACTCTGGACAATGGTTTGTTATTGAGAGTGAAGTGGTTGAGAGAAGGAGTAGCGAAA CAAAGAAAAGAATTCGTTAAAGAGATTAAAAAGTTTGCAAACATAAGGCATCCTAATGTTGTGGGGCTGAGAGGATATTATTGGGGCCCTACGCAGCACG AGAAGCTTATTCTTTCAGATTACATCTCACTAGGAAGTCTTGCAAGTTTTCTATATGATCGACCAGGAAGAAACGGTCCACCACTAACATGGGCACAGAG GCTAAAAATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTTGATCGTGCTGTTCCTCACGGGAACCTCAAAGCTACAAATGTGTTGCTCGAT ACCGCTGACATGAATGCACGAGTTGCTGATTACTGCCTGCATCGACTTATGACTCAAGCTGGTACTACCGAACAGATTCTTGATGCAGGGGTGTTGGGAT ATCGTTCACCCGAGTTAGCTGCGTCGAAGAAGCCAATGCCATCCTTCAAATCAGATGTTTACGCTTTTGGAGTGATACTTTTGGAACTTTTAACCGGAAG GTGTGCTGGTGATGTGATATTTGGTGATGAGGGAGGTGTTAATCTGACAGATTGGATAAGGTTGCGAGTAGCCGGAGGTCGAGGCTCGGAATGTTTTGAT GCTACATTGATGGCAGAAGTTAGTAATAATGTTGTAGAAAAGGGAATGAAGGAGGTCCTAGGAATAGGCATTAGTTGCATTAGATCTGTTTCTGAAAGG BLAST |
Tissue | pods |
Gene name | LI_gene_192905; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_349060
Blastp | Probable LRR receptor-like serine/threonine-protein kinase At4g20940 from Arabidopsis with 70.96% of identity |
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Blastx | Probable LRR receptor-like serine/threonine-protein kinase At4g20940 from Arabidopsis with 70.96% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (AT4G20940) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019420041.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |