Ll_transcript_349308

• Id Trinity: TRINITY_DN52463_c2_g1_i7
• Name Transcript: Ll_transcript_349308
• Sequence: TTCGGAGGATTTCCTGTTTGGTTGAAGTATGTTCCTGGCATAAGCTTTAGAACAGACAATGAACCTTTCAAGAGAGCAATGCAAGGTTTCACTGAGAAGA TTGTTGGAATGATGAAGAGTGAGAATCTCTTTGAATCCCAAGGTGGCCCTATTATACTATCTCAGATTGAGAATGAGTATGGAGCACAGAGTAAGTTACT AGGAGCAGCTGGAGAGAATTATGTGAAATGGGCAGCAAAAATGGCTGTGGAGTTAGGAACTGGAGTGCCTTGGGTGATGTGCAAGGAAGATGATGCACCA GATCCAGTGATAAACACATGCAATGGCTTCTACTGTGATAAGTTCACTCCTAATAGACCTTATAAGCCTACACTTTGGACTGAGGCTTGGAGTGGCTGGT TTACGGAATTCGGAGGTCCGATACACAAAAGACCTGTGCAGGATTTGGCATTCGCGGTTGCTCAATTTGTAACAAAAGGAGGATCCTTTATAAATTACTA CATGTATCATGGAGGAACGAATTTCGGACGAACAGCCGGAGGCCCTTTCATTACGACTAGCTATGACTATGATGCTCCATTAGATGAGTATGGTTTGATT AGGCAACCGAAATATGGTCATCTACAGGAGCTTCACAGGGCTATCAAAATGTGCGAGCGAGCTTTGGTTTCAGCTGACCCAATTGTTACTTCGTTAGGAG AGTTCCAACAGGCCGATGTGTACTATTCGGAATCTGGAGATTGTGCTGCATTTATCTCAAATCATGATTCGAATTCCTCTGTTAGAGTGTTATTCAATAA TATGCATTATACCCTGCCTCCTTGGTCCATTAGCATCCTTCCCGATTGTAGAAATGTTGTCTTCAATACCGCAAAAGTCGGAGTGCAAACATCTCAGATG CAAATGCTGCCAACAAGTAATCAAATGTTCTTATGGGAGAGCGTTGACGAAGATATTACGTCTATGGATGACAGCGCAGTTACGGCTCCCGGTCTCTTGG AACAGATAAATGTGACGCGAGATACAAGTGATTATCTTTGGTATATAACTAGTGTCGATATAGGTTCATCGGAATCTTTTCTACGCGGAGGAGAAACCCC GACTCTCGTTGTTCAGTCTACAGGCCATGCTGTACATGTTTTCATCAATGGTCAACTTTCCGGTTCTGCATTTGGAACAAGGGAGTATAGGAGATTCAAA TACTCGGACAAGGTAAACCTTCGTGCCGGAACAAACAGAATAGCTCTTCTCAGTGTCGCTGTTGGACTTCCGAATGTCGGAGGACGTTACGAGACCTGGA GTACAGGAATCTTAGGTCCAGTTGAAATCCATGGACTTGACCAGGGAAATTGGGACTTGTCCTGGCAGAAATGGACTTACCAGGTTGGGCTGAAAGGAGA GGCGATGAATCTTGTCTCTCCAAATGGAATCTCTTCCGTTCAGTGGATGCAGTCAGCAATAGTTATAAAAAGAAACCAGCCACTGACATGGCACAAGACT TATTTCGATGCTCCGGAAGGAGATGAACCGTTGGCATTGGATATGGAGGGTATGGGTAAAGGTCAAATATGGATTAATGGACAGAGTATTGGAAGATACT GGACAGCATTTGCTAATGGTAATTGCAATGGCTGTAACTATGCCGGAGGATTCAGGCCTCCGAAGTGCCAATTCGGTTGCGGCCAACCAACCCAAAGATG GTACCATGTACCTCGATCTTGGTTGAAACCAACTCAAAATCTACTCGTAATTTTCGAGGAACTCGAAGGCAACCCTTCAAGAATTTCTCTTGTAAAGAGA TCCGTGGGCAGTGTCTGCGCCGATGTGTCGGAGTATCATCCGAATATTAAGAATAGGCACATTGAGAGCTATGGAAATGCAGCAAAGTTCCATCCAGCAA AGGCTCACTTGCATTGTAGCCCGGGTCAGATCATTTCTTCCATTAAATTTGCAAGCTTTGGAACTCCTTTCGGAACTTGTGGGAATTATAAGCAAGGAGC ATGCCATTCTCCTACTTCCTATGCCATTTTAGAGAAGGTGATCTTCATTACTCTTTATTTCACAATTCCCTTCATTAAATTCATGGCGTGTCGAATATAG TGTTTTAAATTGCGATTATGGTTAAGTTGTTCTTTGCTGTCGTTATGGAAAATAGCGGCAATCCGTGTTTGAAATTGCAGGTACAACTGCAGTCATGATT AGTGTGATTACGGTCATTGTGACGACTGTGATGCAATTTGTACCTGTTGCACTATGAATTGTTTTGTAATTAAAATATATTTTGAATTTGATGCGGTCTG ATAAGCTGTGATTTGACCCGATGCGGCTGTATTAATGTGACTCAGTGTCACCGCAATTGTATTATGATGCGGTTGTGGTGACCACAAGTGCAATATCATG GCCGCATCACGTGATGTGATCCATTTGAATCATTGGCGGGAACATTACACCGATTTGGTCAAGATGTCATTGCGGAGTGTAATTTAAAACAATGGTCATC CACCATTCACTGTCGGTCTAAAGATTCGTACACAGTTACTACATCCACCATTCACTCAGATTACTTTTTCTGAAAAGTAACGATGATTAAATATGAATGG TGGATGATGCACCGAGAGTGTATAGAACTCATACGTTGTCGGCGTATCTATCTCTTTTACTTTAAATGTGGATTATAATTAACATGTGCTCTCTTTTTTT CTACCATTTTTGACAGAAGTGTATAGGAAAAGCAAGTTGTGCAGTAATTGTAACAAACAGCATTTTTGGAGACCCATGTTCAAAGGTGTTCAAGTGGTTA TCAGTTGAAGCTGTGTGCTCTGCCACAAATTAAAGGTTTTGATCAGATAAAAAATAGAGTTTAAAATGTATACACTGACAGTGTAAAGATTTATACACAT GCACCCCATCATCCACCATTCATTTGGATTACCTTTTCTGAAAAGTCAATAATAATTAAAAATCAATGGCGATGATGTGATGACAGTATATAAAACTCAT TCACAATCAGTGCATACATCGTTTTCTCCTGACATATACGTTGACATCTAAGAATGAAATAATAATATTTATATATACATTTATGTTAGATATAGTCCAA GGTAAGATCAGAAATGTTGAGTATCTTGAAAACCTTTTGTTTGATAGCATTTGTTGGAATTTTCCTTCTCCATAATGTTCATTCCTATACAAGAGATGAT TTTCCACATGACTTTGTTTTTGGATCATCAACCTCTGCTTATCAGGTTCTTCTCTCAATCTTCTAATGCTTAGTGTTCTTCTCCTCTTACTTTATCTGTA TTTTACGAGAATAAAGTATCTCCTTGTACTTTGCTTGACATGTGTGATTTCTATTATTTCTATGAGTTTTCATTTTAAAACATATTATAAAAAGAAAATT AAAACACATGTCAAACAATGAA
• Tissue: pods
• Gene name: LI_gene_192924;
• Additional information: details;

Expression of Ll_transcript_349308

FPKM

• PAB: 0.9
• PNAB: 27.6
• PS1: 17.6
• PS2: 10.1
• PS3: 15.5
• PW1: 51.5
• PW2: 46.2
• PW3: 12.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349308

• Blastp: Beta-galactosidase 3 from Arabidopsis with 78.24% of identity
• Blastx: Beta-galactosidase 3 from Arabidopsis with 78.24% of identity
• Eggnog: beta-galactosidase(COG1874)
• Kegg: Link to kegg annotations (AT4G36360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446869.1)
• Pfam: Glycosyl hydrolases family 35 (PF01301.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;