Id Trinity | TRINITY_DN52463_c2_g1_i8 |
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Name Transcript | Ll_transcript_349310 |
Sequence | TTCGGAGGATTTCCTGTTTGGTTGAAGTATGTTCCTGGCATAAGCTTTAGAACAGACAATGAACCTTTCAAGAGAGCAATGCAAGGTTTCACTGAGAAGA TTGTTGGAATGATGAAGAGTGAGAATCTCTTTGAATCCCAAGGTGGCCCTATTATACTATCTCAGATTGAGAATGAGTATGGAGCACAGAGTAAGTTACT AGGAGCAGCTGGAGAGAATTATGTGAAATGGGCAGCAAAAATGGCTGTGGAGTTAGGAACTGGAGTGCCTTGGGTGATGTGCAAGGAAGATGATGCACCA GATCCAGTGATAAACACATGCAATGGCTTCTACTGTGATAAGTTCACTCCTAATAGACCTTATAAGCCTACACTTTGGACTGAGGCTTGGAGTGGCTGGT TTACGGAATTCGGAGGTCCGATACACAAAAGACCTGTGCAGGATTTGGCATTCGCGGTTGCTCAATTTGTAACAAAAGGAGGATCCTTTATAAATTACTA CATGGTTTGTTTTCTTAAGCTGCATAAAGATTACAATGCTGGCACCAACTCTTGTAACTTGTGTAAGTTGCATTATGTTTGTTTGTAGTATCATGGAGGA ACGAATTTCGGACGAACAGCCGGAGGCCCTTTCATTACGACTAGCTATGACTATGATGCTCCATTAGATGAGTATGGTTTGATTAGGCAACCGAAATATG GTCATCTACAGGAGCTTCACAGGGCTATCAAAATGTGCGAGCGAGCTTTGGTTTCAGCTGACCCAATTGTTACTTCGTTAGGAGAGTTCCAACAGGCCGA TGTGTACTATTCGGAATCTGGAGATTGTGCTGCATTTATCTCAAATCATGATTCGAATTCCTCTGTTAGAGTGTTATTCAATAATATGCATTATACCCTG CCTCCTTGGTCCATTAGCATCCTTCCCGATTGTAGAAATGTTGTCTTCAATACCGCAAAAGTCGGAGTGCAAACATCTCAGATGCAAATGCTGCCAACAA GTAATCAAATGTTCTTATGGGAGAGCGTTGACGAAGATATTACGTCTATGGATGACAGCGCAGTTACGGCTCCCGGTCTCTTGGAACAGATAAATGTGAC GCGAGATACAAGTGATTATCTTTGGTATATAACTAGTGTCGATATAGGTTCATCGGAATCTTTTCTACGCGGAGGAGAAACCCCGACTCTCGTTGTTCAG TCTACAGGCCATGCTGTACATGTTTTCATCAATGGTCAACTTTCCGGTTCTGCATTTGGAACAAGGGAGTATAGGAGATTCAAATACTCGGACAAGGTAA ACCTTCGTGCCGGAACAAACAGAATAGCTCTTCTCAGTGTCGCTGTTGGACTTCCGAATGTCGGAGGACGTTACGAGACCTGGAGTACAGGAATCTTAGG TCCAGTTGAAATCCATGGACTTGACCAGGGAAATTGGGACTTGTCCTGGCAGAAATGGACTTACCAGGTTGGGCTGAAAGGAGAGGCGATGAATCTTGTC TCTCCAAATGGAATCTCTTCCGTTCAGTGGATGCAGTCAGCAATAGTTATAAAAAGAAACCAGCCACTGACATGGCACAAGACTTATTTCGATGCTCCGG AAGGAGATGAACCGTTGGCATTGGATATGGAGGGTATGGGTAAAGGTCAAATATGGATTAATGGACAGAGTATTGGAAGATACTGGACAGCATTTGCTAA TGGTAATTGCAATGGCTGTAACTATGCCGGAGGATTCAGGCCTCCGAAGTGCCAATTCGGTTGCGGCCAACCAACCCAAAGATGGTACCATGTACCTCGA TCTTGGTTGAAACCAACTCAAAATCTACTCGTAATTTTCGAGGAACTCGAAGGCAACCCTTCAAGAATTTCTCTTGTAAAGAGATCCGTGGGCAGTGTCT GCGCCGATGTGTCGGAGTATCATCCGAATATTAAGAATAGGCACATTGAGAGCTATGGAAATGCAGCAAAGTTCCATCCAGCAAAGGCTCACTTGCATTG TAGCCCGGGTCAGATCATTTCTTCCATTAAATTTGCAAGCTTTGGAACTCCTTTCGGAACTTGTGGGAATTATAAGCAAGGAGCATGCCATTCTCCTACT TCCTATGCCATTTTAGAGAAGGTGATCTTCATTACTCTTTATTTCACAATTCCCTTCATTAAATTCATGGCGTGTCGAATATAGTGTTTTAAATTGCGAT TATGGTTAAGTTGTTCTTTGCTGTCGTTATGGAAAATAGCGGCAATCCGTGTTTGAAATTGCAGGTACAACTGCAGTCATGATTAGTGTGATTACGGTCA TTGTGACGACTGTGATGCAATTTGTACCTGTTGCACTATGAATTGTTTTGTAATTAAAATATATTTTGAATTTGATGCGGTCTGATAAGCTGTGATTTGA CCCGATGCGGCTGTATTAATGTGACTCAGTGTCACCGCAATTGTATTATGATGCGGTTGTGGTGACCACAAGTGCAATATCATGGCCGCATCACGTGATG TGATCCATTTGAATCATTGGCGGGAACATTACACCGATTTGGTCAAGATGTCATTGCGGAGTGTAATTTAAAACAATGGTCATCCACCATTCACTGTCGG TCTAAAGATTCGTACACAGTTACTACATCCACCATTCACTCAGATTACTTTTTCTGAAAAGTAACGATGATTAAATATGAATGGTGGATGATGCACCGAG AGTGTATAGAACTCATACGTTGTCGGCGTATCTATCTCTTTTACTTTAAATGTGGATTATAATTAACATGTGCTCTCTTTTTTTCTACCATTTTTGACAG AAGTGTATAGGAAAAGCAAGTTGTGCAGTAATTGTAACAAACAGCATTTTTGGAGACCCATGTTCAAAGGTGTTCAAGTGGTTATCAGTTGAAGCTGTGT GCTCTGCCACAAATTAAAGGTTTTGATCAGATAAAAAATAGAGTTTAAAATGTATACACTGACAGTGTAAAGATTTATACACATGCACCCCATCATCCAC CATTCATTTGGATTACCTTTTCTGAAAAGTCAATAATAATTAAAAATCAATGGCGATGATGTGATGACAGTATATAAAACTCATTCACAATCAGTGCATA CATCGTTTTCTCCTGACATATACGTTGACATCTAAGAATGAAATAATAATATTTATATATACATTTATGTTAGATATAGTCCAAGGTAAGATCAGAAATG TTGAGTATCTTGAAAACCTTTTGTTTGATAGCATTTGTTGGAATTTTCCTTCTCCATAATGTTCATTCCTATACAAGAGATGATTTTCCACATGACTTTG TTTTTGGATCATCAACCTCTGCTTATCAGGTTCTTCTCTCAATCTTCTAATGCTTAGTGTTCTTCTCCTCTTACTTTATCTGTATTTTACGAGAATAAAG TATCTCCTTGTACTTTGCTTGACATGTGTGATTTCTATTATTTCTATGAGTTTTCATTTTAAAACATATTATAAAAAGAAAATTAAAACACATGTCAAAC AATGAA BLAST |
Tissue | pods |
Gene name | LI_gene_192924; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_349310
Blastp | Beta-galactosidase 3 from Arabidopsis with 74.57% of identity |
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Blastx | Beta-galactosidase 3 from Arabidopsis with 75.14% of identity |
Eggnog | beta-galactosidase(COG1874) |
Kegg | Link to kegg annotations (AT4G36360) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446869.1) |
Pfam | Galactose binding lectin domain (PF02140.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |