Ll_transcript_350341

• Id Trinity: TRINITY_DN52465_c2_g2_i16
• Name Transcript: Ll_transcript_350341
• Sequence: ATTTTACTGTGAACTCTGTCGACTCAGCCGTGCAGACCCGTTTTGGGTTTCAGTGGCACACCCTTTGTTTCCTGTGAAGTTGAACCCAACTAGTATTTCA ATTGATGGAACCAACCCAGTGCAGAGCGTGGAGAGAACTTTTCAACTTACGCGGGCAGACAAGGACTTGTTATCAAAACAGGAATTTGATGTTCAGGCTT GGTGTATACTTTTGAACGACAAGGTTTCATTTAGGATGCAATGGCCACAGCATACAGACTTGCAGGTCAATGGTGTTCCTGTCCGTGCTATTAACAGACC TGGTTCACAATTGCTTGGGGCAAATGGTCGTGATGATGGTCCAATTATCACGCCTTATATAAAAGATGGAATCAATAAGATTCACTTAACTGGATGTGAT GCTCGCGTTTTTTGTTTTGGGATCCGTATTGTTAAAAGACGCAACATGCAGCAGGTCCTAAACATAATTCCCAAGGAGGCTGACGGTGAGCGTTTTGAAG ATGCCCTGGCACGTGTCTGTCGATGCGTTGGAGGTGGAAATGCAGATGACAATGCTGATAGTGACAGTGATTTGGAAGTGGTTTCAGATACTTTTACTAT CAACCTTCGTTGTCCAATGAGTGGTTCAAGAATGAAGATCGCAGGAAGATTCAAACCTTGTGTTCACATGGGTTGTTTTGATCTTGAAGTTTTTGTGGAA ATGAATCAACGGTCAAGGAAGTGGCAATGCCCCATATGCCTAAAAAAACTATGCTTTGGAGAATATCATCGTTGATCCTTATTTTAATCGAATCACTTCT AAGATGATACATTGTGGCGAAGAGGTTACAGAGGTTGAGGTGAAGCCTGATGGCTCTTGGCGTGTGAAGACAAAGAGTGAAAGTGAACGCCTAGAGATAG GGAATCTTGCACAATGGCACTCTCCTGACGGATCCCTCTGTATTTCCAATGATAGAGAAACAAAATTGGAAACATTGAAGCAGGTCAAACAAGAAGGTGT TTCAGGCTCTCCTACTGGTTTAAAAATTGGCATAAGGAAGAATCGCAATGGAGTTTGGGAAGTCAGCAAACCTGAGGACACTAACACTTCTTCTGGCAAT AGATTGAAAGGGGACTTTGGAAATCATGAACAAGTTGTTATTCCAATGAGCAGCAGTGCCACTGGAAGTGGTCGGGATGGTGATGATCCTAGCGTAAATC AGGGTGGTGGTGGACATATTGATTATTCTACTACCAATGGGATTGAGTTGGATTCTCTGTGTCTCAGTAGTGCTGCTTTGACATATGGATATACTGCACA TAATACTTCTGCTCAAGCGGTTGCTGCTGAAGTTATTATTCTGAGTGATTCAGATGAAGACAACGATATGCTGATATCTCCTACAATTGCATATAAGAAT AACCAAGCTGGTGCTGCAGGAGATAGTTACTCAGTGCCACCACCTGGAATTGTTGATTCATACACTGAAGATCACAGTCTTGGTGGAAATTCATGCTTGG GACTTTTTCCTAACGAAGATGATTTTGTGATGCATTCCTCTCTATGGTCGTTGCCGTCCGGAACACAGGCTGATCCTGGATTCCAATTCTTTGGTTCTAA TGCAGATGTATCAGATGCTTTGGTCCATTTGCAGCATGGTCCTATTAATTGCTCTTCATCATTGAATGGCTATTCATTGGCTCCTGATACTGCTCTGGGA TCTAGTACTCTCATACCAGATTCCTCTGCTTGTCGGTCTGATGCTGATTTAAATGGTGGTTTGGTTGACAATCCATTGGCATTTGCTGGAGATGACCCCT CACTTCAGATTTTTCTCCCCACGAGACCAGCAGAATCATCAGTTCAGCATGGATCAAGAGATCAGACAAATGAGTCTAATGGTGTCTGCACTGAGGATTG GATATCTCTTAGTCTTGGAGGTGGCGCTTCTGGCAGTAATGGCAATGCTTCCACTCAAAATGGATTTAATTCTGGCCTTCAAGTCCCAACCAGAGGACCT TCCACAAATAATATGGCTGATACTGCATCTTTGCTTCTTGGAATGAATGATGATAGACCCGACAAAACAAGTAGACCAAGATCAGATAACCCTTTCTCAT TTCCTCGCCAAAAACGTTCCGTGAGACCCCGCTTGTATCTTTCCATTGATTCAGAATCAGAGTAAAGGTGTCAGACCTTTTGTTCGAGAACATAGGGTAC AAATATTTAGAATTTGAAGGAAGTTGAGAGGCATTTTTGGTCCTCATGAAATGGCAGTTTGATGTGGTCTGAGGCATCACTGGTGGAACAGAGCTACAAA TTTGCGGAATTACTTGCACCACCTACTGGCAAAGATGGCTATAAAGATTTTTAATTCTTTATGCATGATATTTTAGTTTGTCGGGATGACAGATTTAACA GGTCAGACTCAAAGATATTATTACCTTTAATTCCCAACCAGGATCTGCTGGGGTTGTAGTGGAGTTTAAACATTTTTAATTGATGGAGGAGTTCCACTTA CGTTAAGATTTTTATATCTGGCATTTTTGTCTCTGATGAGAGCAAATAACACTTGTAAATGTTCAGACATCAGATTCTATAGTGATACCAAAATTCGTTT TTCTCAATCTGATGGATAATATTACCAGAACATCTTGTGCTTGCTTTCGTCATCCTTGCATCTTATTATTTTCCCAGATAGACGCTCAATTTTATATTCT GGTGGTATATGTTTAGGCACTAAAGATGCCTCCTGGATTGTGCTTCCAGATGCAGATCAATATTTTCCCGTCAGTCAATGGGCCCTTAAATATAAGGGTT GTGTGGCAACTATCGTAAAAAGTTTACTGCTTATGCATGGATCCTGATAAAACCTTGGTAGGCACGCTGTGTAAGCCCAAATCCTAAAAGGAATGACAAG ATGCTTGTGAAGATGGTAGTCAAAGCAGCACTATCTGGTAGCAGGGGTTCCAGTAGACAGTCTATGATTGCCTGATGAAGTGGAACAAGCAATTCTCAAG ATGTTGAGTCTGGTTTAGACTTGGGAGGCTTCTTTGCTGAGTCATATTCAACTGATTCAACCTTTAGTGAGACTCACCTCATTTTTATTTGAGAAGGGCC CAACATATTTGCCATGAAAATGTGATAGATTGTAGAATGAAGGAAGTTGAGATCTTACAAGCAGTGAGAGAGGAAAGATTTTTTAGCTTCAAGATGTCAA TGAATCCATTTCCAGTACAATGTGTGAAAACAGACCAGATTAATTAACTTTCAGATCAGCTTATTCTGTATTCAAAACAGTTTATAGTAAAATTATAGAG AACTTCATTTATTTTTACATCATAAATCTGATGCAACTTTAATT
• Tissue: pods
• Gene name: LI_gene_192946;
• Additional information: details;

Expression of Ll_transcript_350341

FPKM

• PAB: 2.3
• PNAB: 0.8
• PS1: 1.3
• PS2: 0.1
• PS3: 0.9
• PW1: 0.7
• PW2: 0.5
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_350341

• Blastp: E3 SUMO-protein ligase SIZ1 from Arabidopsis with 56.08% of identity
• Blastx: E3 SUMO-protein ligase SIZ1 from Arabidopsis with 56.72% of identity
• Eggnog: Protein inhibitor of activated STAT(ENOG410XQ2E)
• Kegg: Link to kegg annotations (AT5G60410)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448718.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;