Id Trinity | TRINITY_DN52465_c2_g2_i23 |
---|---|
Name Transcript | Ll_transcript_350352 |
Sequence | TTCATTTCCTTGCAACACATTTGAATTTCTACTGTTTTCTCTGTTACAGGTTTTGGGTTTCAGTGGCACACCCTTTGTTTCCTGTGAAGTTGAACCCAAC TAGTATTTCAATTGATGGGTGAGTACATGGTGTGAATTTATTGAAATTAGACATAGTTCATATAATGCTGACTTGCTGTAATCAGTTTCATTTTTTTCTT TAACAAAATACATGTCTTGTTTAATTATTCCATTCCATTTCCCTTGGAATCTTGATATACTTTTGTTGCATAATTTTTGCACAAGAGACTGGGACGTTCT TCATTCTTGCTTGAACTCTAAGAACTATTTAGTACAAGGTCGGAGGTCCTTTGCTTTATGATAAACTCTTGATGGTTTTCTTCAGATGGTTTTTATTTTT TATTTTATTTTTTGAGGCATCTTTCTTTAGACGACTTAAAACAATTATTTATGCTATTTACAGGGATCATAGTGTAAGTGTTGTGTCATTTACTACTAAT ACTTTGTTGATGTAATTTTTTGGGTGTGTTGAATTTGCATTTCTGAGGTGGGATTCCCTCAGGGGATGAACCTACTGTGGAATGAAAAATTTATCCTTTA CTTTCTCTTTCTTTTTATCTAGAATGTTTTCTTAAATCTATCAGATGGAGTTACCTGTAACATCATTTTTATGCTCTAGAGTCAAGGCAATCTAATTATG TCATGCAAACAAATATTTTGTCCATGGTTAAAATCTATTTTTCAATGTGGCTTTCTGTCTTTAATGACTTAACAACATCCCTGTTTGAATTGTTTAGAAC CAACCCAGTGCAGAGCGTGGAGAGAACTTTTCAACTTACGCGGGCAGACAAGGACTTGTTATCAAAACAGGAATTTGATGTTCAGGCTTGGTGTATGCTT CTGAACGACAAGGTTTCATTTAGGATGCAATGGCCACAGCATACAGACTTGCAGGTCAATGGTGTTCCTGTCCGTGCTATTAACAGACCTGGTTCACAAT TGCTTGGGGCAAATGGTCGTGATGATGGTCCAATTATCACGCCTTATATAAAAGATGGAATCAATAAGATTCACTTAACTGGATGTGATGCTCGCGTTTT TTGTTTTGGGATCCGTATTGTTAAAAGACGCAACATGCAGCAGGTCCTAAACATAATTCCCAAGGAGGCTGACGGTGAGCGTTTTGAAGATGCCCTGGCA CGTGTCTGTCGATGCGTTGGAGGTGGAAATGCAGATGACAATGCTGATAGTGACAGTGATTTGGAAGTGGTTTCAGATACTTTTACTATCAACCTTCGTT GTCCAATGAGTGGTTCAAGAATGAAGATCGCAGGAAGATTCAAACCTTGTGTTCACATGGGTTGTTTTGATCTTGAAGTTTTTGTGGAAATGAATCAACG GTCAAGGAAGTGGCAATGCCCCATATGCCTAAAAAAACTATGCTTTGGAGAATATCATCGTTGATCCTTATTTTAATCGAATCACTTCTAAGATGATACA TTGTGGCGAAGAGGTTACAGAGGTTGAGGTGAAGCCTGATGGCTCTTGGCGTGTGAAGACAAAGAGTGAAAGTGAACGCCTAGAGATAGGGAATCTTGCA CAATGGCACTCTCCTGACGGATCCCTCTGTATTTCCAATGATAGAGAAACAAAATTGGAAACATTGAAGCAGGTCAAACAAGAAGGTGTTTCAGGCTCTC CTACTGGTTTAAAAATTGGCATAAGGAAGAATCGCAATGGAGTTTGGGAAGTCAGCAAACCTGAGGACACTAACACTTCTTCTGGCAATAGATTGAAAGG GGACTTTGGAAATCATGAACAAGTTGTTATTCCAATGAGCAGCAGTGCCACTGGAAGTGGTCGGGATGGTGATGATCCTAGCGTAAATCAGGGTGGTGGT GGACATATTGATTATTCTACTACCAATGGGATTGAGTTGGATTCTCTGTGTCTCAGTAGTGCTGCTTTGACATATGGATATACTGCACATAATACTTCTG CTCAAGCGGTTGCTGCTGAAGTTATTATTCTGAGTGATTCAGATGAAGACAACGATATGCTGATATCTCCTACAATTGCATATAAGAATAACCAAGCTGG TGCTGCAGGAGATAGTTACTCAGTGCCACCACCTGGAATTGTTGATTCATACACTGAAGATCACAGTCTTGGTGGAAATTCATGCTTGGGACTTTTTCCT AACGAAGATGATTTTGTGATGCATTCCTCTCTATGGTCGTTGCCGTCCGGAACACAGGCTGATCCTGGATTCCAATTCTTTGGTTCTAATGCAGATGTAT CAGATGCTTTGGTCCATTTGCAGCATGGTCCTATTAATTGCTCTTCATCATTGAATGGCTATTCATTGGCTCCTGATACTGCTCTGGGATCTAGTACTCT CATACCAGATTCCTCTGCTTGTCGGTCTGATGCTGATTTAAATGGTGGTTTGGTTGACAATCCATTGGCATTTGCTGGAGATGACCCCTCACTTCAGATT TTTCTCCCCACGAGACCAGCAGAATCATCAGTTCAGCATGGATCAAGAGATCAGACAAATGAGTCTAATGGTGTCTGCACTGAGGATTGGATATCTCTTA GTCTTGGAGGTGGCGCTTCTGGCAGTAATGGCAATGCTTCCACTCAAAATGGATTTAATTCTGGCCTTCAAGTCCCAACCAGAGGACCTTCCACAAATAA TATGGCTGATACTGGTCTGTTACTTTCTGACTCTAAATCTCAAGTGTTAATTTTTTGGTGAAAGTTGCTTTTACTGGCAAACTCTTATTACATGGTAGTG GAGCATATTTTTAGTGAAGAGAGATTAATGAATGTTATAGTTAATGAAGAAAGGAAACTGACCCTATTCTTCGGATTTAAAAAAGTGAAAGAACTCAAAG AAGTTAATAACAGATTTTATAAAACAATGTGTATTTTAAATTAGAAGTTTATTAAGTATCTTCATTAAGATATACATATAAATATCTATCATTTTAAGAA GATAAAAAATTCATAACGTAACATTTTATGAATAAATCTAGAATTTGTATTTTACTTGTAATTTTAGCTAGGGTAGTTTATTTCTCAGTGTTCATTGATT TCAAATTTCACTGCTGTCTTCATCAGGAAACATGCTTTCCTCTCATGTAATTGCACGATTTAAACTACTAGATCAAAATGAAAGCAATGGGGAGAGGTAA GGGGTTTACAAAAGTAAACAAACTATAACAATTTACAAATTCCTATAATCTGGTGAAGTCAGTGTTCTCCACATTGTCAACTGGACACAGCAACAAATAG CTTTTTTTTTTATTTTAAATAGAAAACATCGTATAGGAATTATCAAAAACTAAATATATTTATAATATATTGTTTATTTTCCAAGAAACCTTCACAGTCC CCCTTTTTCAAGTGGACAAAGTAACCATTAGCTGTTTCTATACAATAGAACACAGATTATAGGAATTAATTTTTAAAATAATAAATAATATAAAATATAT TGTTTTGAGGGCGAGCTTGGCGCAATGGTAAGGTTATTGCTTAGTGGATGGAC BLAST |
Tissue | pods |
Gene name | LI_gene_192946; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_350352
Blastp | E3 SUMO-protein ligase SIZ1 from Arabidopsis with 54.09% of identity |
---|---|
Blastx | E3 SUMO-protein ligase SIZ1 from Arabidopsis with 54.88% of identity |
Eggnog | Protein inhibitor of activated STAT(ENOG410XQ2E) |
Kegg | Link to kegg annotations (AT5G60410) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448718.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |