| Id Trinity | TRINITY_DN52465_c2_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_350324 |
| Sequence | TTCATTTCCTTGCAACACATTTGAATTTCTACTGTTTTCTCTGTTACAGGTTTTGGGTTTCAGTGGCACACCCTTTGTTTCCTGTGAAGTTGAACCCAAC TAGTATTTCAATTGATGGGTGAGTACATGGTGTGAATTTATTGAAATTAGACATAGTTCATATAATGCTGACTTGCTGTAATCAGTTTCATTTTTTTCTT TAACAAAATACATGTCTTGTTTAATTATTCCATTCCATTTCCCTTGGAATCTTGATATACTTTTGTTGCATAATTTTTGCACAAGAGACTGGGACGTTCT TCATTCTTGCTTGAACTCTAAGAACTATTTAGTACAAGGTCGGAGGTCCTTTGCTTTATGATAAACTCTTGATGGTTTTCTTCAGATGGTTTTTATTTTT TATTTTATTTTTTGAGGCATCTTTCTTTAGACGACTTAAAACAATTATTTATGCTATTTACAGGGATCATAGTGTAAGTGTTGTGTCATTTACTACTAAT ACTTTGTTGATGTAATTTTTTGGGTGTGTTGAATTTGCATTTCTGAGGTGGGATTCCCTCAGGGGATGAACCTACTGTGGAATGAAAAATTTATCCTTTA CTTTCTCTTTCTTTTTATCTAGAATGTTTTCTTAAATCTATCAGATGGAGTTACCTGTAACATCATTTTTATGCTCTAGAGTCAAGGCAATCTAATTATG TCATGCAAACAAATATTTTGTCCATGGTTAAAATCTATTTTTCAATGTGGCTTTCTGTCTTTAATGACTTAACAACATCCCTGTTTGAATTGTTTAGAAC CAACCCAGTGCAGAGCGTGGAGAGAACTTTTCAACTTACGCGGGCAGACAAGGACTTGTTATCAAAACAGGAATTTGATGTTCAGGCTTGGTGTATGCTT CTGAACGACAAGGTTTCATTTAGGATGCAATGGCCACAGCATACAGACTTGCAGGTCAATGGTGTTCCTGTCCGTGCTATTAACAGACCTGGTTCACAAT TGCTTGGGGCAAATGGTCGTGATGATGGTCCAATTATCACGCCTTATATAAAAGATGGAATCAATAAGATTCACTTAACTGGATGTGATGCTCGCGTTTT TTGTTTTGGGATCCGTATTGTTAAAAGACGCAACATGCAGCAGGTCCTAAACATAATTCCCAAGGAGGCTGACGGTGAGCGTTTTGAAGATGCCCTGGCA CGTGTCTGTCGATGCGTTGGAGGTGGAAATGCAGATGACAATGCTGATAGTGACAGTGATTTGGAAGTGGTTTCAGATACTTTTACTATCAACCTTCGTT GTCCAATGAGTGGTTCAAGAATGAAGATCGCAGGAAGATTCAAACCTTGTGTTCACATGGGTTGTTTTGATCTTGAAGTTTTTGTGGAAATGAATCAACG GTCAAGGAAGTGGCAATGCCCCATATGCCTAAAAAAACTATGCTTTGGAGAATATCATCGTTGATCCTTATTTTAATCGAATCACTTCTAAGATGATACA TTGTGGCGAAGAGGTTACAGAGGTTGAGGTGAAGCCTGATGGCTCTTGGCGTGTGAAGACAAAGAGTGAAAGTGAACGCCTAGAGATAGGGAATCTTGCA CAATGGCACTCTCCTGACGGATCCCTCTGTATTTCCAATGATAGAGAAACAAAATTGGAAACATTGAAGCAGGTCAAACAAGAAGGTGTTTCAGGCTCTC CTACTGGTTTAAAAATTGGCATAAGGAAGAATCGCAATGGAGTTTGGGAAGTCAGCAAACCTGAGGACACTAACACTTCTTCTGGCAATAGATTGAAAGG GGACTTTGGAAATCATGAACAAGTTGTTATTCCAATGAGCAGCAGTGCCACTGGAAGTGGTCGGGATGGTGATGATCCTAGCGTAAATCAGGGTGGTGGT GGACATATTGATTATTCTACTACCAATGGGATTGAGTTGGATTCTCTGTGTCTCAGTAGTGCTGCTTTGACATATGGATATACTGCACATAATACTTCTG CTCAAGCGGTTGCTGCTGAAGTTATTATTCTGAGTGATTCAGATGAAGACAACGATATGCTGATATCTCCTACAATTGCATATAAGAATAACCAAGCTGG TGCTGCAGGAGATAGTTACTCAGTGCCACCACCTGGAATTGTTGATTCATACACTGAAGATCACAGTCTTGGTGGAAATTCATGCTTGGGACTTTTTCCT AACGAAGATGATTTTGTGATGCATTCCTCTCTATGGTCGTTGCCGTCCGGAACACAGGCTGATCCTGGATTCCAATTCTTTGGTTCTAATGCAGATGTAT CAGATGCTTTGGTCCATTTGCAGCATGGTCCTATTAATTGCTCTTCATCATTGAATGGCTATTCATTGGCTCCTGATACTGCTCTGGGATCTAGTACTCT CATACCAGATTCCTCTGCTTGTCGGTCTGATGCTGATTTAAATGGTGGTTTGGTTGACAATCCATTGGCATTTGCTGGAGATGACCCCTCACTTCAGATT TTTCTCCCCACGAGACCAGCAGAATCATCAGTTCAGCATGGATCAAGAGATCAGACAAATGAGTCTAATGGTGTCTGCACTGAGGATTGGATATCTCTTA GTCTTGGAGGTGGCGCTTCTGGCAGTAATGGCAATGCTTCCACTCAAAATGGATTTAATTCTGGCCTTCAAGTCCCAACCAGAGGACCTTCCACAAATAA TATGGCTGATACTGCATCTTTGCTTCTTGGAATGAATGATGATAGACCCGACAAAACAAGTAGACCAAGATCAGATAACCCTTTCTCATTTCCTCGCCAA AAACGTTCCGTGAGACCCCGCTTGTATCTTTCCATTGATTCAGAATCAGAGTAAAGGTGTCAGACCTTTTGTTCGAGAACATAGGGTACAAATATTTAGA ATTTGAAGGAAGTTGAGAGGCATTTTTGGTCCTCATGAAATGGCAGTTTGATGTGGTCTGAGGCATCACTGGTGGAACAGAGCTACAAATTTGCGGAATT ACTTGCACCACCTACTGGCAAAGATGGCTATAAAGATTTTTAATTCTTTATGCATGATATTTTAGTTTGTCGGGATGACAGATTTAACAGGTCAGACTCA AAGATATTATTACCTTTAATTCCCAACCAGGATCTGCTGGGGTTGTAGTGGAGTTTAAACATTTTTAATTGATGGAGGAGTTCCACTTACGTTAAGATTT TTATATCTGGCATTTTTGTCTCTGATGAGAGCAAATAACACTTGTAAATGTTCAGACATCAGATTCTATAGTGATACCAAAATTCGTTTTTCTCAATCTG ATGGATAATATTACCAGAACATCTTGTGCTTGCTTTCGTCATCCTTGCATCTTATTATTTTCCCAGATAGACGCTCAATTTTATATTCTGGTGGTATATG TTTAGGCACTAAAGATGCCTCCTGGATTGTGCTTCCAGATGCAGATCAATATTTTCCCGTCAGTCAATGGGCCCTTAAATATAAGGGTTGTGTGGCAACT ATCGTAAAAAGTTTACTGCTTATGCATGGATCCTGATAAAACCTTGGTAGGCACGCTGTGTAAGCCCAAATCCTAAAAGGAATGACAAGATGCTTGTGAA GATGGTAGTCAAAGCAGCACTATCTGGTAGCAGGGGTTCCAGTAGACAGTCTATGATTGCCTGATGAAGTGGAACAAGCAATTCTCAAGATGTTGAGTCT GGTTTAGACTTGGGAGGCTTCTTTGCTGAGTCATATTCAACTGATTCAACCTTTAGTGAGACTCACCTCATTTTTATTTGAGAAGGGCCCAACATATTTG CCATGAAAATGTGATAGATTGTAGAATGAAGGAAGTTGAGATCTTACAAGCAGTGAGAGAGGAAAGATTTTTTAGCTTCAAGATGTCAATGAATCCATTT CCAGTACAATGTGTGAAAACAGACCAGATTAATTAACTTTCAGATCAGCTTATTCTGTATTCAAAACAGTTTATAGTAAAATTATAGAGAACTTCATTTA TTTTTACATCATAAATCTGATGCAACTTTAATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_192946; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_350324
| Blastp | E3 SUMO-protein ligase SIZ1 from Arabidopsis with 56.08% of identity |
|---|---|
| Blastx | E3 SUMO-protein ligase SIZ1 from Arabidopsis with 56.72% of identity |
| Eggnog | Protein inhibitor of activated STAT(ENOG410XQ2E) |
| Kegg | Link to kegg annotations (AT5G60410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448718.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |