Id Trinity | TRINITY_DN52466_c1_g2_i6 |
---|---|
Name Transcript | Ll_transcript_350901 |
Sequence | ACTTGTTCTAGTAGTAAGGTTATTTTGTCCTTTTCAAGATCTTTGTCCTTCAGAAAAACAGTAAGAAAAGTCAAAAAAGAAAAGAAAAAAGGAATCAAAA TAAATTAAAGTGATTTTGGAGGGAGCACAGCGCCAAAGGGCAAACACCAAAGCCTGCACTGCATTCACATGACCGGCACGTGACTCTCTCTTTCTCTCTC TCTCCGCCATGTCTTCCGCCGCCGGCAACACCCGCTTCACTCAAAGAGCCTCCTCCGCCGTCTCCCCGTTCCGTTCACGCAAGTCTCCGCCACTTCCAAA AACCACCGCAAGACCTACAACACCGTCGTCGAGGCCTTCTCCGAAGCTCTCCGTTTCCCCCGTCGTGAGTAGCACCTCGCCTGATGTCACCAAGTCGAAG GAGAATGTCTCTGTCACAGTTCGGTTTCGACCTCTCAGTGCCAGAGAAATTGGTAAAGGAGATGAAATAGCGTGGTATGCGGATGGCGATAATATAGTTA GAAACGAGAACAATCCTTCCATTGCTTATGGTTTTGATAAGGTGTTCGGGCCTGCAACTACAACTCGTCATGTTTATGATGTGGCTGCTCAACATGTTGT TGGTGGTGCTATGGAAGGGGTTAATGGTACTGTTTTTGCATATGGTGTTACTAGTAGTGGAAAGACTCATACCATGCATGGGGAGCAAAAGTCTCCTGGA ATTGTCCCACTTGCAGTGAAGGATGTTTTTAGTATCATACAGGAGACTCCTGGACGAGAATTCCTACTCCGTGTCTCATATCTTGAGATTTACAATGAGG TCATTAATGACTTGCTGGACCCAATTGGGCAGAACCTAAGAATACGAGAGGATGCTCAGGGGACTTATGTTGAAGGAATCAAAGAGGAAGTTGTGCTATC CCCTGCTCATGCCCTTTCGTTGATTGCTACAGGAGAAGAGCATAGGCATGTTGGTTCAAATAACTTCAATCTTCTTAGCAGTCGAAGCCACACTATATTC ACCTTGACAATTGAAAGCAGCCCACGAGGGGACAATATGGGGGAAGAGGACGTGACATTGTCCCACTTGCACTTAATTGATCTTGCAGGGTCAGAAAGTT CTAAAACTGAAACAACTGGTTTGCGAAGGAAAGAGGGTTCCTATATTAATAAAAGCTTGCTTACTCTTGGAACGGTGATTGCTAAATTAACGGATGGGAA GGCAACTCATGTTCCATATTGAGATTCAAAGCTCACTCGTTTGTTGCAGTCATCCCTTAGTGGCCACGGACGAATTTCGCTCATTTGTACAGTTACGCCT GCTTCTAGCAGCAGTGAAGAGACACACAACACGTTAAAATTTGCACACCGGAGTAAGTATGTTGAAATCAAGGCTTCTCAAAATAAGATTATGGACGAGA AGTCACTTATCAAAAAATATCAGAGGGAAATTTGGGAGTTAAAGCAGGAGCTTCAACAGTTGAAGCGTGGCATGATTGAGAATCCCAATGTGGCTGCGTC CTCACAAGAAGACCTGGTTACTTTGAAGCTTCAGCTGGAAGCTGGCCAGTCCAAATTGAGGTCAAGATTGGAAGAGGAGGAACAAGATAAAGCAGCGTTG ATGGGAAGAATTCAGCGACTAACTAAGTTAATCTTAGTTTCTACGAAGAATTCAATGTCGTCAACATCAACCATTCCAGAAAGGCCTGGCCATAGGCGAA GGCATTCTTTTGGGGAAGATGAGCTAGCATATTTGCCAGATAGAAAACGCGAGTCCTTCATTGACGATGACACTGGTAGCTATGCTTCAGTGGATGAAAA GGACAATGTTACTAATTTAGATGAATTGGTGAAGGATTATAAAAGGACCAAAAGACGAGGAATGCTTGGTTGGTTGAAGCTGAGAAGACCTGATAATCTG GTTGACTTATCACCTAATGTTGATACCGAGGTTTCTGCAAATGGGTCGCCTGCATCTTCTTCAAAATCACCTGGTAAAGTTATACTTGATGATGTGAAAG ACTCACACAGGAATTCAGTCAGTAGAAAGGATAATGTTCAAGCTCTAAATTCTTTTCCAGGAAGAACTCAAGCAGGTGACTTGTTCAGTGGAACTGTTGG AGGTCGTTATATTCCTCCGAGTGGTACTACAGTTACAGATCAGATGGATCTTCTTCGTGAACAAGTAAAGGTGTTGGCCAGTGAGGTGGCATTTTGTTTT AGCTCTCTGAAAAGACTGAATGACGAAGCGGCTAAAAAGCCTGAAGATATCCATTTACAAGAGGAGATGCATAAGTTGAAGGTTGAAATCAGACAGAAGA AAAACCAAATCCGTATTCTGGAGCAACGCATGATAGGATCACTTGGACATGCACCAAGTAACAGCGAAATGTCTCAGGCTCTTTCCAAGCTTACCACTGA GCTCAATGAAAAGATTTTCGAACTCGAGATCAAGTCAGCAGACAATAGAATACTCCAAGAGCAACTACAGTTGAAGAATTCAGAGAATGCTGAGATGCAA GAGACAATTCTTTCACTAGGGAAACAGATGAATTTGTTACTGGATAAAACCTCAACTAACTCTCAGCAGTTTGCCAATAGTGAGACTGACTGCCGTAAAG AGATATTGGGAAAGACTGATAAACCACTAGAGTTCACAAACTTGAATGTAAGTAGTGATTCTATCATAAATTCCTAAATTCTCTTGCAGGTTATCTTTCT TTCTGGCACCATCTGCATAAGCAACATAAAAAAACTACTGTTTTCTTTCGATGAAAAAAAAACTACTGTTACTTATTGCATAACAAATAATCACAAGCAA GAAATTCAAGATTCTTTTGGTGTCTGTCTGTGTTTTGGTAGGAGTGATTTTCTTTTCCCCTTTTTCCTATTAAATTGTGCAGGCACCTGAAATAGAGAAT TTAAGGCAAGAAAATGTGAGATTAGGTGAAGAGAAAGACGAGCTTGAAATTCAAAGCCAGAAGCTTGCAGAGGATGCTTCATATGCAAAAGAGTTGGCAG CAGCTGCAGCAGTTGAACTCCGAAACCTGGCTGAAGAAGTAACTAAACTCACTTACGAGAATGCAAAATTGACTGCTGATCTGGTAGCTGCAAAAGAAGA CTGCTCCAAATCTAACTCTAGCCAGATATCTTCTAGGTCTTTGCAGAAGGACCTTAATGCTAGTTTCCAAAGAGAAGCTGCATTAGAAGAAACTCTATCA GTGAAAGATGAAATAGAAGCTGACCTAAGAAGGACACTTAATGAAATAAAACACCAAAAACAAGATATGGAAAATGAGCTTACGAGCATGCAGTTGCTGG TAGCAAAGATGAGAAAGTCTGGCATCATTACTGAGGATAAGTCAACAGTCCATATGCCCAAGCCCAATGATATGCATACCAGGGTTAGAAATGGACTTCT TCCATCTAATGGTTACTCTAATAGAAAACAATACAAAGAGGATGAAACTTCGGGAAACATGGAAGATAGGATTGCATTAGAAGAGCTGAAGGCTAGTTAT CAAAGAGAAAGACGAAGATGCAAAGAACTAGAAAGTCGTATTTCTAGATTGAAGGGTGAAGATATTGCTGGTCTGGATGTTATGGCCCTTGAAGAGCTTC AAAACTTTCATATTGACGCAATATCAAGGATTTGCCATGCAAAGTATGCAGAACATAACTTGTAGCATCTTCCTATTGAGTGAGTTACCGTAGATTTTTT GTGCTTACAAAATACTGATTATCACCTTAAGTTCCTTTTGCTGCTGTGTGGAATACAATGAAGTATCATCCCTTAATTTAAGTGATTAACTAACTTCTAC TGATGGGAATTGTGGCATCTACTTCAACAATCTTTCTCTACCAAGGATTAACAACTCAGTAGTAGTTATCAGTTACAAATTCATTAACTGTAGCTTATGA AGCAAAAAATATTGCAGTAAACTGACAAAACTGAATCTATGTATATATCTGTTGCACCCTATGGAAATATGTTATAATTTAAAATATCCTATTCCTAACA GCAAACTAAAATGGAG BLAST |
Tissue | pods |
Gene name | LI_gene_192955; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_350901
Blastp | Kinesin-like protein KIN-7E, chloroplastic from Oryza sativa with 58.81% of identity |
---|---|
Blastx | Kinesin-like protein KIN-7E, chloroplastic from Oryza sativa with 73.26% of identity |
Eggnog | Kinesin family member(COG5059) |
Kegg | Link to kegg annotations (9271714) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456133.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |