Id Trinity | TRINITY_DN52467_c1_g2_i2 |
---|---|
Name Transcript | Ll_transcript_350016 |
Sequence | AAAGAATCTTACCCTCATTTGAACAATTCTTCTATTCTGTCCTTTTCCTCTTATCATTTTGCCACAAATATAGCAATTTGAGCATCCCCTGTTAGTGACA GAGGAATCCAATACATAAAGCTCATTCCTTTATTACTTCACTCCGCAGTCACACCAAAAACCCTAAACCCTAATTTCTTCTTCAATGGGAGCAATGTCGT ACTGTGTAACCCATTTCCAGAAGCCCCCACATGTTCTTTTCTCCAATTCACCTTCATTTCCCAAACCCCATAACCCCAATTGCTCATTCCCAAAACCCAT TACCCAAAACAACAACAATTTTTGTTACGGCAAATTAGGGTTTCGATGTTCTCACAAAGCGCGCCATGGTGTTGTTTCAGCATCTGAAGCCACAATTGTC GCCCCAACTGTGGAAACTGTAAGCAAAGTGGGAAAAAGGACGGACTTGAAGAAGATTCTGATCCTAGGAGCTGGACCAATCGTGATTGGTCAAGCTTGTG AGTTTGATTACTCGGGAACACAAGCTTGTAAGGCACTGAAAGAAGAAGGGTATGAAGTTATCCTTATAAACTCCAACCCCGCCACGATAATGACTGATCC GGATTTGGCCGACCGGACCTACATTACCCCAATGACGCCTGAATTGGTCGAGCAGGTGTTGGAAGCTGAGGGCCCGGACGCTCTGCTTCCAACAATGGGT GGCCAGACCGCGCTTAATCTCGCGGTTGCATTGGCTGAGAGTGGCGCGTTGGAGAAATATGGTGTGGAGTTGATTGGCGCGAAGCTGGACGCGATTAAGA AGGCAGAGGATAGAGATTTGTTCAAACAAGCAATGAAGAGTATTGGGATAAAAACTTCGCCTTCAGGGATTGGAACCACAATGAGGGAATGTATGGAAAT CGCAAATGAGATTGGGGAATTCCCTTTGATTATTAGGCCTGCTTTCACCTTGGGTGGAACCGGTGGTGGAATTGCGTATAATAGGGAAGAGTTTGAGGAA ATTTGTAAGGCCGGGATTGCGGCTAG BLAST |
Tissue | pods |
Gene name | LI_gene_192963; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_350016
Blastp | Carbamoyl-phosphate synthase large chain, chloroplastic from Arabidopsis with 87.44% of identity |
---|---|
Blastx | Carbamoyl-phosphate synthase large chain, chloroplastic from Arabidopsis with 87.44% of identity |
Eggnog | carbamoyl-phosphate synthetase ammonia chain(COG0458) |
Kegg | Link to kegg annotations (AT1G29900) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447909.1) |
Pfam | Carbamoyl-phosphate synthase L chain, ATP binding domain (PF02786.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |