Ll_transcript_348312

• Id Trinity: TRINITY_DN52468_c9_g2_i1
• Name Transcript: Ll_transcript_348312
• Sequence: CTTATCTTCTTCTATCATGACTTTATTCCACATAAAATTCCACACACAGTTCTATCTCTGTTACACCATAGCTATGGTGTTTGAAGCCTTGGTTTAAAAC ATGTATTCAACTAGAATGAATCTCTTACACTATCCTAATACCCCCAATTTCTCACTCTCCCATATTCCAAAACCCCAAAACTTGCTACGATCCCGAATCA ACATTTCTTCTCCACCATCTCCCATTCGTTTGCGTTCACACTTTCTTCAAGCACCTCGTCTGTATCCTATTAAATGTGCATCTGTTAACTCTTCGGATTC CCTGCAACCCGATCCACCCCAGCCCCAGACGACAAAGCAAAATTCGGTGCCTATTCTGGAGATTCTGAAACAATCAAATACACTTCTGCCTCATGCAGTC ATTGCTAGTACACTGCTAGCTCTAATCTTCCCGCCTTCTTTTACGTGGTTTACCAGCAGATACTATGCTCCTGCACTAGGGTTTTTGATGTTTGCAGTTG GGGTTAATTCAAGTGAAAAGGACTTCCTTGAAGCATTTTATAGGCCGGCAGAAATTCTCACTGGTTATTTTGGCCAGTTTGTTGTGAAGCCTCTTCTCGG GTATCTGTTTTGCATGATTTCAGTGACTGTATTTGGTCTACCATCAGCAGTAGGTGCAGGAATTGCTTTGGTGTCTTGTGTTAGTGGAGCCCAGCTCTCA AATTATGCTACTTTTCTCACGGATCCACAAATGGCACCATTAAGCATAGTTATGACATCATTGTCCACTGCTTCTGCGGTTTTTATCACGCCGCTCTTAT CACTGCTGCTCATTGGGAAAAGACTGCCTGTAGATGTTAAAGGAATGGTATTTAGCATTACCCAGATTGTGGTGGCACCTATTGTTGCCGGCCTGATTCT TAATCGATTCTTTCCTCGTATTTGTAATGCTATTCGACCATTCTTGCCTCCATTGTCAGTATTAGTGACCGCTCTTTGTGTTGGAGCACCACTCGCTATT AACATTGAATCTGTTAAATCCCCATTTGGACTTTCCATCCTGTTGCTGGTTGTTGCTTTTCATTTGTCAGCTTTTATAGCTGGTTATATTCTAAGTGGAT TTATCTTCCGTGATTCTCCTGATGTGAAGCCACTACAACGAACAATTTCCTTTGAAACAGGAATGCAAAGTAGTCTCCTCGCCCTGGCTCTTGCTAACCA GTTCTTCCCAGATCCAGTAGTGGCTGTGCCTCCTGCAATTTCTACTGTAATTATGTCTTTGATGGGATTTTCTCTTGTCCTGATTTGGGCTAAGAGTAAA GAGTAAGAGGTTGATAAAATACAACACCTGAGAGACATGGATATAGGGGGTATACACGCACATTGGTTCATCTTTTATCTCGGTTCGGGTAGCGGCATAG TTACTACTAACTACTAAGGCACCAACAGCAGGCAGATTTATGTGTATTTATGTTTAAAGGAATGGAAACAGCTTTTACCATTTATGAGTTTGATTATTTG AGCAAGCCTAAAGTGTAGGTGAAGGAGATCCATTTTGTTTATTGGCCACGAATGCTTCTATGATGGCACGTAGTATTTATATTTTCTGCTTCATAACTGA ATAGTGGTTAGGCATGTTTTTTGTTTGATACTATCAATGATATCTCCTAATCTTTTTGGGTAAAAA
• Tissue: pods
• Gene name: LI_gene_192985;
• Additional information: details;

Expression of Ll_transcript_348312

FPKM

• PAB: 3.6
• PNAB: 15
• PS1: 15.8
• PS2: 7
• PS3: 12
• PW1: 11.7
• PW2: 11.1
• PW3: 7.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_348312

• Blastp: Probable sodium/metabolite cotransporter BASS5, chloroplastic from Oryza sativa with 72.56% of identity
• Blastx: Probable sodium/metabolite cotransporter BASS5, chloroplastic from Oryza sativa with 72.84% of identity
• Eggnog: bile acid(COG0385)
• Kegg: Link to kegg annotations (4347609)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421875.1)
• Pfam: Sodium Bile acid symporter family (PF01758.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;