| Id Trinity | TRINITY_DN52468_c9_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_348318 |
| Sequence | TATATTATTATACTTTTTTCATTGATAATTATATTTTTGAAGGAAAAATAAAAAATATTTTAACATTATCATTAGTTAACCCAAACAAGGGAAAAGATAA CCCTCCTTTCCCCCTTCCCTTCCTTCCCCTTCCCAACCCTTTGATCCCTTTCCTTTCCTTCCCCTCGTGACTCTCAAACAGACCCTTAGGTTTCCGGTAA TTTTTATAACTGACATTTAAAATCACCGATTTCATTAGTTGAAAACTTGAAATGATGCATAATTGTCAATTTTCATTTTTAACTATTTAAACTTAGATAT CATGTTATAATGTAGTTCTTTGTTAGGTTCATTTGTTGAGTGCTTGCCCTGTAGTTCTTGATGAGAAGTTTTTATTTACATATATAGTACAATATAATAT TTTTATTTAGAGAGTGAGCCTTTGTGCAACGATCACATTGTTTGCCTTGTGAAAGTAAGGTCATTGTACACCAAGTCACCATTCTTTTAGTTGTGCAATA CATACAATCAGAAATGGAGTAACCCAAGGTATCTTTATTGTTGGTTATTTTATTCCTTTCTCAGACGACAAAGCAAAATTCGGTGCCTATTCTGGAGATT CTGAAACAATCAAATACACTTCTGCCTCATGCAGTCATTGCTAGTACACTGCTAGCTCTAATCTTCCCGCCTTCTTTTACGTGGTTTACCAGCAGATACT ATGCTCCTGCACTAGGGTTTTTGATGTTTGCAGTTGGGGTTAATTCAAGTGAAAAGGACTTCCTTGAAGCATTTTATAGGCCGGCAGAAATTCTCACTGG TTATTTTGGCCAGTTTGTTGTGAAGCCTCTTCTCGGGTATCTGTTTTGCATGATTTCAGTGACTGTATTTGGTCTACCATCAGCAGTAGGTGCAGGAATT GCTTTGGTGTCTTGTGTTAGTGGAGCCCAGCTCTCAAATTATGCTACTTTTCTCACGGATCCACAAATGGCACCATTAAGCATAGTTATGACATCATTGT CCACTGCTTCTGCGGTTTTTATCACGCCGCTCTTATCACTGCTGCTCATTGGGAAAAGACTGCCTGTAGATGTTAAAGGAATGGTATTTAGCATTACCCA GATTGTGGTGGCACCTATTGTTGCCGGCCTGATTCTTAATCGATTCTTTCCTCGTATTTGTAATGCTATTCGACCATTCTTGCCTCCATTGTCAGTATTA GTGACCGCTCTTTGTGTTGGAGCACCACTCGCTATTAACATTGAATCTGTTAAATCCCCATTTGGACTTTCCATCCTGTTGCTGGTTGTTGCTTTTCATT TGTCAGCTTTTATAGCTGGTTATATTCTAAGTGGATTTATCTTCCGTGATTCTCCTGATGTGAAGCCACTACAACGAACAATTTCCTTTGAAACAGGAAT GCAAAGTAGTCTCCTCGCCCTGGCTCTTGCTAACCAGTTCTTCCCAGATCCAGTAGTGGCTGTGCCTCCTGCAATTTCTACTGTAATTATGTCTTTGATG GGATTTTCTCTTGTCCTGATTTGGGCTAAGAGTAAAGAGTAAGAGGTTGATAAAATACAACACCTGAGAGACATGGATATAGGGGGTATACACGCACATT GGTTCATCTTTTATCTCGGTTCGGGTAGCGGCATAGTTACTACTAACTACTAAGGCACCAACAGCAGGCAGATTTATGTGTATTTATGTTTAAAGGAATG GAAACAGCTTTTACCATTTATGAGTTTGATTATTTGAGCAAGCCTAAAGTGTAGGTGAAGGAGATCCATTTTGTTTATTGGCCACGAATGCTTCTATGAT GGCACGTAGTATTTATATTTTCTGCTTCATAACTGAATAGTGGTTAGGCATGTTTTTTGTTTGATACTATCAATGATATCTCCTAATCTTTTTGGGTAAA AA BLAST |
| Tissue | pods |
| Gene name | LI_gene_192985; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_348318
| Blastp | Probable sodium/metabolite cotransporter BASS5, chloroplastic from Oryza sativa with 74.36% of identity |
|---|---|
| Blastx | Probable sodium/metabolite cotransporter BASS5, chloroplastic from Oryza sativa with 72.48% of identity |
| Eggnog | bile acid(COG0385) |
| Kegg | Link to kegg annotations (4347609) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421875.1) |
| Pfam | Sodium Bile acid symporter family (PF01758.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |