Ll_transcript_349078

• Id Trinity: TRINITY_DN52471_c1_g1_i1
• Name Transcript: Ll_transcript_349078
• Sequence: ATAGTAATTCATAAACCCATAACTATCATTTCTCTTCTGTCATTGAAGCAAAAGAAGCAGAAGAAACACACAGCAATGGTTTCAACGGGAAGCAACACTG AATCTCTCTCCTCCAACAACACAAAACAACATTCTTCCTCTTCCGACGACAAACCTCCATCTCCGCTACCTTCCTCAGAACGACAAAAGGTTGATAATGA CGGCGCCGAGTCCGAGAAGCCGGTGCCGGCGGCGGAGAATTCAAAGGACTTGATAACTGTTGAGCCTCCGGCACGTTCCGGCGATACTCAGATCACTTCA GCTGGCGGTGCTGGTGGCAAAGATGACGGTGTGCCTGCCGTGGATGTGACGGCACCGATTGCTGAGGCCAAAGAAGAAGAAGAAACACACACAGCAATGG TTTCAACGAGAAGCAACACTGAATCTCTCTCCCCCAACAACACTAAACGGCCTTCTTCATCTTCCGACGACAAACCTCCTTCTCCTTCTCCTTCGCCAAA ACGACAAAAGGTTGATAATGATGGTGCTGAGTCCGAGAAACCGGTGCCGGCGGCGGAGAATTCCGAGGATTTGAGAACTCTTGAGCCTCCGGCTGATGCC GGCGATACTCAGATCGCTTCAGCTGGCGGTGCTGATGGTGAAGGTGACGTTGTGCCTGCCGTGGATGTGAAGGCACCGCTTGCTGAGGGGCCTTTGCCAA TAATTTTGGTGGCTGAAAAGCCAAGACCTTCTTTCTCTTCATGGAGCATGTATCAGAAGCAGAATCCAAAAACTGATTGTTCAGTTCCCTGGTGCAGGCT TTTAACTCAGTCTTCACAGGATCCAAATGTTGTCATTTGCATGCCGAACTTCATGATTGGTTCGAGTAGAAATTGCAACTTTCTGTTGAAGGATCAGACT ACAAGTGGAATTTTATGCAAGATCAAACATACTGAGTGTGAGGGAAATGCTGTAGCTGTGCTACAAAGTATGGGTAGCAAAGGATCAGTGCTAGTAAATG GGATGCTTGTCAAGAAGAACACTAGCTGTGTGCTTAACTCGGGTGACGAGGTGGTTTTTGGGTTGTTTCTTGGGAATCATTCTTATATTTTTCAGCAACT AAATACTGAAATTGCTGTTAAGGGTGCAGAAGTTCAAAATTGTGCTGGGAAATTTGTGCAGATTGATAGGAGAAATCGAGACCCTTCAGCTTTGGGAGCT GAGCTTAATGGTCTCGAAGGCAACTCAGCTCCAAATGTAGGGGCTGATAAGGCTTCTGATGTTGGAGCAAGCGACAAAAACTCTCCTTTGGATTGTGATC CAGATGATACAGGCACAGAAGCAGGCAATGTATTGGAAGAAAGAAATGGGACGAGGGATACACTAGGTGCATCGACTTCGGGTACGTCTGTGCGCTGTGC AGTTTTTAAGGCAAATGTTGAAGCGGCAATTCTGGATGGAAAAGAAACGGATGTGTCTTTCGACAACTTCCCATACTATTTAAGTGAGGATACAAAAAAG GTCTTGGTGGCAGCATGCTTTATACACCTAAAGCATAAAGAACATGCAAAGTATACCACAGATCTTACAACCATAAACCCTCGTATTCTACTCTCGGGAC CTGCAGGATCAGAAATATACCAAGAGATGTTGGCAAAAGCACTAGCAAATTACTTTGGTGCTAAATTGCTCATATTTGATAGCCATTTGCTTTTGGGTGG TTTATCTTCAAAGGAAGCTGAGCTGCTCAAAGATGGATCCCATGCTGATAAATCCTGCAGCTCCGCCAAGCAAAGTCCTACAGCCACAGACATGGCTAGG AGCATGGATCCATCAACTAGCGACACTGATACACCTAGCTCTTCAAATACACCTACTCCACATGGTCTCGAGTCCCAACCTAAGCTAGAAATTGATAGTG TAGCATCTACCTCTGGGACAGCTAAAAATTGTTTGTTTAAACTAGGTGATAAGGTAAAATATAGCTGCTCATCTTCTGGTACATTATATCAGACATCTTC TTCAAGGGGTCCAACTAATGGAAGTCGTGGAAAGGTTGTCTTGGTTTTTGAGGAAAATCCCTTGTCAAAAGTTGGTGTAAGATTTGATAAACCTGTACCT GATGGAGTTGATCTTGGAGGTGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTCAATGATCTTCGTTTGGAAAACAGTGGTGTGGAGGAACTGGACA AATTGCTTATCAATTCGTTGTTTGAGGTTGTTTACAGTGAGAGCAGAAATGCCCCATTTATTTTATTCATGAAGGATGCTGAGAAGTCTGTAGTAGGAAA CGGAGATCCATTTTCATTTAAAAGTAGGCTTGAAAACCTTCCCGACAATGTGGTGGTAATAGGTTCACACACTCACACCGACAGTAGAAAGGAAAAGTCA CATCCCGGGGGTTTGCTTTTTACGAAATTCGGTAGCAATCAGACTGCCCTTCTTGACTTGGCTTTTCCGGATGGTTTTGGACGATTGCATGACAGAGGAA AGGAAGTCCCAAAGCCAAACAAAATGTTGATTAAGCTGTTCCCTAATAAAGTTACAATTCACATGCCACAGGATGAGGCACTTCTAGCATCTTGGAAGCA GCAACTGGATCGAGATGTCGAGACTCTTAAAATCAAAGGAAATTTACATCACTTGCGCACAGTTTTAGGCCGTTGCGGAATGGAATGCGAAGGACTTGAG ACCTTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATAGTCGGTTGGGCTTTAAGCCACCACCTCATGCAGAATTCTACAGCTGATC CTGATTCAAAGCTGGTCTTGTCTTGTGACAGCATCCAGTATGGAATTGAGATCTTGCATTCTATACAGAATGAGCCCAAGAGCCTGAAGAAGTCTCTTAA GGATATTGTAACAGAAAACGAGTTTGAAAAGAAGCTTTTGGGTGATGTTATTCCACCTAGTGACATTGACGTTACTTTTGATGATATTGGAGCTCTTGAA AATGTCAAGGATACACTGAAGGAATTGGTGATGCTTCCTTTACAGAGGCCTGAGCTGTTTTGCAAGGGACAATTAACCAAGCCGTGCAAGGGTATCCTAT TATTTGGCCCCCCTGGAACAGGTAAAACAATGCTTGCAAAGGCAATTGCTACTGAAGCTGGTGCAAACTTTATCAACATTTCTATGTCAAGTATCACGTC TAAGTGGTTTGGCGAGGGTGAAAAATATGTGAAAGCTGTTTTCTCTCTGGCTAGTAAAATTGCTCCTAGTGTTATATTTGTCGATGAAGTTGACAGTATG TTGGGACGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTAAACTGGGATGGATTACGTACAAAGGAAACTGAGC GAGTTCTTGTGCTTGCAGCCACTAATAGGCCCTATGACCTAGATGAGGCTGTCATACGGAGGTTGCCTCGGAGATTAATGGTAAATTTACCTGATGCTCC GAACAGAGCAAAAATATTAAAAGTCATACTAGCTAAAGAGGACTTGTCTTCTGATATTGCTTTGGAGGCAATTGCAAGTATGACTGATGGATATTCCGGA AGTGATCTTAAGGTTAGAGCTGGTCTTTCTCTTTTTATCCTAAACTTTTTAAAGTGATTAACTGATTATGTTAGTTGGTCAATATTTGGGGTGCCTTCAT GCTTGATATTCTATTGCAGAATTTGTGTGTAACAGCTGCACACCGTCCAATTAAAGAAATATTAGAAAAAGAAAAGAAGGTATGGTTTCTCTGAATTGGC GTGTTTCTCACAGTGCTGGTTTTGGAGTATTTCTATGAGTTTGTCATTGCTGTGGTTGTGATGTTACTTTTAGAACAGTTCATGTTTGCATGAATCATTC CATCATCATGGTTGCTGTAATCATTCGTGTTTGATCTAACATTATTGATGCACAACAGGAACATGCTGCTGCTCTAGCCGAAGGAAGACCTGCTCCAGCA TTAAGTGGAAGTGCGGATATCCGATCCTTGAACATGGAAGACTTTAGACATGCTCATCAACAGGTATGTGCAAGTGTTTCATCCGAATCCGTGAATATGA CTGAGCTTTTACAATGGAATGAACTATATGGCGAAGGTGGTTCAAGAAGAAAAAGCTCACTCAGCTATTTCATGTGAGAGTCTCTGTACAAATGTTTACC CTACTCCATGTCCCGAAGCCTGCAGTTTTTCCGGTCTCCTGAGACTTGCAGAGATGCCTGCCGACCCATTTCGTATGTAAAATGAAATATAGATTTTGTA AGTTAATTTTTCTTCTTCTTACCTGTGGGATGGTGGGTTCTGAAAGGATGGAGCCTTTTACAGAATTTTGATCAGGCTACACTGCTTTTTATTTTGTTCC TATTCCCCCTGCCTCCACCAATGAAGACCCATGTTGGAATTTGAAGTTATATAAGTGTCTTGGTAGAGGAAGTAAATATAAGTGTCATTAGACCACCCTC TGAAAACATTTATGGCTCCTAATGGAATTTGCTGGAACAATAAAGCATTTAATGATAATGACTATTTAATGTTTTATGTACATATCCATCATTGATGCCG CATTGTTAGAATTCTGTGTTCATTATAAATCTTCATCGTTTTTTCTTCCAAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_193007;
• Additional information: details;

Expression of Ll_transcript_349078

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0.6
• PS2: 0.7
• PS3: 0.6
• PW1: 0.3
• PW2: 0.2
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349078

• Blastp: ATPase family AAA domain-containing protein 1-A from Danio with 44.24% of identity
• Blastx: ATPase family AAA domain-containing protein 1-A from Danio with 43.49% of identity
• Eggnog: Aaa atpase(COG0464)
• Kegg: Link to kegg annotations (368672)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417132.1)
• Pfam: FHA domain (PF00498.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;