Ll_transcript_349098

• Id Trinity: TRINITY_DN52471_c1_g1_i12
• Name Transcript: Ll_transcript_349098
• Sequence: ATAGTAATTCATAAACCCATAACTATCATTTCTCTTCTGTCATTGAAGCCAAAGAAGAAGAAGAAACACACACAGCAATGGTTTCAACGAGAAGCAACAC TGAATCTCTCTCCCCCAACAACACTAAACGGCCTTCTTCATCTTCCGACGACAAACCTCCTTCTCCTTCTCCTTCGCCAAAACGACAAAAGGTTGATAAT GATGGTGCTGAGTCCGAGAAACCGGTGCCGGCGGCGGAGAATTCCGAGGATTTGAGAACTCTTGAGCCTCCGGCTGATGCCGGCGATACTCAGATCGCTT CAGCTGGCGGTGCTGATGGTGAAGGTGACGTTGTGCCTGCCGTGGATGTGAAGGCACCGCTTGCTGAGGGGCCTTTGCCAATAATTTTGGTGGCTGAAAA GCCAAGACCTTCTTTCTCTTCATGGAGCATGTATCAGAAGCAGAATCCAAAAACTGATTGTTCAGTTCCCTGGTGCAGGCTTTTAACTCAGTCTTCACAG GATCCAAATGTTGTCATTTGCATGCCGAACTTCATGATTGGTTCGAGTAGAAATTGCAACTTTCTGTTGAAGGATCAGACTACAAGTGGAATTTTATGCA AGATCAAACATACTGAGTGTGAGGGAAATGCTGTAGCTGTGCTACAAAGTATGGGTAGCAAAGGATCAGTGCTAGTAAATGGGATGCTTGTCAAGAAGAA CACTAGCTGTGTGCTTAACTCGGGTGACGAGGTGGTTTTTGGGTTGTTTCTTGGGAATCATTCTTATATTTTTCAGCAACTAAATACTGAAATTGCTGTT AAGGGTGCAGAAGTTCAAAATTGTGCTGGGAAATTTGTGCAGATTGATAGGAGAAATCGAGACCCTTCAGCTTTGGGAGCTGAGCTTAATGGTCTCGAAG GCAACTCAGCTCCAAATGTAGGGGCTGATAAGGCTTCTGATGTTGGAGCAAGCGACAAAAACTCTCCTTTGGATTGTGATCCAGATGATACAGGCACAGA AGCAGGCAATGTATTGGAAGAAAGAAATGGGACGAGGGATACACTAGGTGCATCGACTTCGGGTACGTCTGTGCGCTGTGCAGTTTTTAAGGCAAATGTT GAAGCGGCAATTCTGGATGGAAAAGAAACGGATGTGTCTTTCGACAACTTCCCATACTATTTAAGTGAGGATACAAAAAAGGTCTTGGTGGCAGCATGCT TTATACACCTAAAGCATAAAGAACATGCAAAGTATACCACAGATCTTACAACCATAAACCCTCGTATTCTACTCTCGGGACCTGCAGGATCAGAAATATA CCAAGAGATGTTGGCAAAAGCACTAGCAAATTACTTTGGTGCTAAATTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCTTCAAAGGAAGCT GAGCTGCTCAAAGATGGATCCCATGCTGATAAATCCTGCAGCTCCGCCAAGCAAAGTCCTACAGCCACAGACATGGCTAGGAGCATGGATCCATCAACTA GCGACACTGATACACCTAGCTCTTCAAATACACCTACTCCACATGGTCTCGAGTCCCAACCTAAGCTAGAAATTGATAGTGTAGCATCTACCTCTGGGAC AGCTAAAAATTGTTTGTTTAAACTAGGTGATAAGGTAAAATATAGCTGCTCATCTTCTGGTACATTATATCAGACATCTTCTTCAAGGGGTCCAACTAAT GGAAGTCGTGGAAAGGTTGTCTTGGTTTTTGAGGAAAATCCCTTGTCAAAAGTTGGTGTAAGATTTGATAAACCTGTACCTGATGGAGTTGATCTTGGAG GTGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTCAATGATCTTCGTTTGGAAAACAGTGGTGTGGAGGAACTGGACAAATTGCTTATCAATTCGTT GTTTGAGGTTGTTTACAGTGAGAGCAGAAATGCCCCATTTATTTTATTCATGAAGGATGCTGAGAAGTCTGTAGTAGGAAACGGAGATCCATTTTCATTT AAAAGTAGGCTTGAAAACCTTCCCGACAATGTGGTGGTAATAGGTTCACACACTCACACCGACAGTAGAAAGGAAAAGTCACATCCCGGGGGTTTGCTTT TTACGAAATTCGGTAGCAATCAGACTGCCCTTCTTGACTTGGCTTTTCCGGATGGTTTTGGACGATTGCATGACAGAGGAAAGGAAGTCCCAAAGCCAAA CAAAATGTTGATTAAGCTGTTCCCTAATAAAGTTACAATTCACATGCCACAGGATGAGGCACTTCTAGCATCTTGGAAGCAGCAACTGGATCGAGATGTC GAGACTCTTAAAATCAAAGGAAATTTACATCACTTGCGCACAGTTTTAGGCCGTTGCGGAATGGAATGCGAAGGACTTGAGACCTTGTGCATTAAGGATC AGACACTTACAAATGAAAATGCAGAGAAGATAGTCGGTTGGGCTTTAAGCCACCACCTCATGCAGAATTCTACAGCTGATCCTGATTCAAAGCTGGTCTT GTCTTGTGACAGCATCCAGTATGGAATTGAGATCTTGCATTCTATACAGAATGAGCCCAAGAGCCTGAAGAAGTCTCTTAAGGATATTGTAACAGAAAAC GAGTTTGAAAAGAAGCTTTTGGCTGATGTTGTTCCACCCAGTGACATTGGTGTTTCTTTTGATGATATTGGAGCTCTAGAAAATGTGAAGGATACACTTA AGGAGTTGGTGATGCTTCCTTTACAGAGGCCACAGCTGTTTTGCAAGGGACAGTTAACCAAGCCGTGCAAGGGTATCCTATTATTTGGTCCCCCTGGAAC AGGTAAAACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCGAACTTCATCAACATTTCTATGTCAAGTATTACATCTAAGTGGTTTGGTGAGGGC GAAAAATATGTGAAAGCTGTTTTCTCTCTGGCTAGTAAAATTGCTCCTAGTGTTAT
• Tissue: pods
• Gene name: LI_gene_193007;
• Additional information: details;

Expression of Ll_transcript_349098

FPKM

• PAB: 0.2
• PNAB: 1.7
• PS1: 1.6
• PS2: 1
• PS3: 1.6
• PW1: 1.8
• PW2: 1.2
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349098

• Blastp: Protein MSP1 from Saccharomyces with 48.36% of identity
• Blastx: Protein MSP1 from Saccharomyces with 48.36% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YGR028W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415674.1)
• Pfam: FHA domain (PF00498.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;