Ll_transcript_349104

• Id Trinity: TRINITY_DN52471_c1_g1_i16
• Name Transcript: Ll_transcript_349104
• Sequence: CTTGTCTATTTATATCCCCCATTTTCCTGTAGTTGCATCCAAACAAACAGAAACACAGAAACACAGAACACAAAACACAAAACACATCAATGGTTTCAAC AAGACGCAACACTGGATCTCTCTCTTCCAACAACACTAAACGTCCTTCTTCTTCTTCCGACGATAATAACAAGCCTCCTTCTTCTCCTTCTTCAAAACGA CATAAGGTTGATAATGGTGGCGACACGTCGGAGAAACCGACGCCGGCGGCGGAGAATTGTAAGGATTTGAGAACTCTTGAGCCTCCTGCCGATCCCGGAG AATGCGGTACCGGCGATACTCAGATCTCTGAAGCTGGCGGTGCTGATCGGAAATGTGACGCTGCGCCTGCAGTGGCTGTGGCAGCTCCGATTGCTGAAGG ATCTTCGCCAACAACCTTGGTGGCTGAGAAACAAAGGGCTTCTTTTTCTTCATGGGGGATATATCAGAAGCAGAATCAAAAAACTGAATGTTCAGTTCCC TGGTGCAGGCTATTGACTCAGTCTTCACAGAATCCAAATGTTATCATTTGTACACCGAATTTCACGATCGGTTCAAGTAGAAATTGCAATTTTCCATTGA AGGATCAGACTATAAGTGGAAATTTATGCAAGATCAAGCATACTGAGTGTGAGGGAAGTACTGTAGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCTGT GCTAGTAAATGGGACGCTTGTCAAGAAGAACACCAGCTCTGTGCTTAACTCAGGCGATGAGGTGGTTTTTGGGTTGCTGGGAAATCATTCTTATATTTTT CAGCAACTAAATACCGAAGGCACAGTTAAGGGTGCAGACATTCAGAATGGTGTTGGGAAATTTGTGCAGATTGAAAGGAGAAATAGAGACTCTTCAGCTG TGGCAGGGGCTTCCATCTTGGCTTCTCTTTCTAGCCTCAAACATGATCTTACAAAATTGAAGTCTCCATCTGAGACTGCCAATAAACCTCATCATGTTAA TGATGTTTCTGGTCATTCTGTTCTCCGTGATGGTACAGAAGCTGAGCTTGACGGTCTTCAAAGCAACTCAGCTCCAAATGTGGGGACGGATAAGGCTTCT GATGTTGGAGCAAGCGACAAAAACTCTCCTTTGGATTGTGATCCAGATGATACAGGCACAGAAGCAGGCAATGTAAAACTCTCTGGGGTGAATGATTTCC TAGGGCCTTTCTTCAGGATCCTTGCTGGATCTAATTGTAAACTGAAATTGAGAAAAAATATCTGTAAACAGGTATTGGAAGAAAGAAATGGGACGAGGGA TACACTAGGTGCATCGACTTCGGGTACGTCTGTGCGCTGTGCAGTTTTTAAGGCAAATGTTGAAGCGGCAATTCTGGATGGAAAAGAAACGGATGTGTCT TTCGACAACTTCCCATACTATTTAAGTGAGGATACAAAAAAGGTCTTGGTGGCAGCATGCTTTATACACCTAAAGCATAAAGAACATGCAAAGTATACCA CAGATCTTACAACCATAAACCCTCGTATTCTACTCTCGGGACCTGCAGGATCAGAAATATACCAAGAGATGTTGGCAAAAGCACTAGCAAATTACTTTGG TGCTAAATTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCTTCAAAGGAAGCTGAGCTGCTCAAAGATGGATCCCATGCTGATAAATCCTGC AGCTCCGCCAAGCAAAGTCCTACAGCCACAGACATGGCTAGGAGCATGGATCCATCAACTAGCGACACTGATACACCTAGCTCTTCAAATACACCTACTC CACATGGTCTCGAGTCCCAACCTAAGCTAGAAATTGATAGTGTAGCATCTACCTCTGGGACAGCTAAAAATTGTTTGTTTAAACTAGGTGATAAGGTAAA ATATAGCTGCTCATCTTCTGGTACATTATATCAGACATCTTCTTCAAGGGGTCCAACTAATGGAAGTCGTGGAAAGGTTGTCTTGGTTTTTGAGGAAAAT CCCTTGTCAAAAGTTGGTGTAAGATTTGATAAACCTGTACCTGATGGAGTTGATCTTGGAGGTGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTCA ATGATCTTCGTTTGGAAAACAGTGGTGTGGAGGAACTGGACAAATTGCTTATCAATTCGTTGTTTGAGGTTGTTTACAGTGAGAGCAGAAATGCCCCATT TATTTTATTCATGAAGGATGCTGAGAAGTCTGTAGTAGGAAACGGAGATCCATTTTCATTTAAAAGTAGGCTTGAAAACCTTCCCGACAATGTGGTGGTA ATAGGTTCACACACTCACACCGACAGTAGAAAGGAAAAGTCACATCCCGGGGGTTTGCTTTTTACGAAATTCGGTAGCAATCAGACTGCCCTTCTTGACT TGGCTTTTCCGGATGGTTTTGGACGATTGCATGACAGAGGAAAGGAAGTCCCAAAGCCAAACAAAATGTTGATTAAGCTGTTCCCTAATAAAGTTACAAT TCACATGCCACAGGATGAGGCACTTCTAGCATCTTGGAAGCAGCAACTGGATCGAGATGTCGAGACTCTTAAAATCAAAGGAAATTTACATCACTTGCGC ACAGTTTTAGGCCGTTGCGGAATGGAATGCGAAGGACTTGAGACCTTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATAGTCGGTT GGGCTTTAAGCCACCACCTCATGCAGAATTCTACAGCTGATCCTGATTCAAAGCTGGTCTTGTCTTGTGACAGCATCCAGTATGGAATTGAGATCTTGCA TTCTATACAGAATGAGCCCAAGAGCCTGAAGAAGTCTCTTAAGGATATTGTAACAGAAAACGAGTTTGAAAAGAAGCTTTTGGGTGATGTTATTCCACCT AGTGACATTGACGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACACTGAAGGAATTGGTGATGCTTCCTTTACAGAGGCCTGAGCTGT TTTGCAAGGGACAATTAACCAAGCCGTGCAAGGGTATCCTATTATTTGGCCCCCCTGGAACAGGTAAAACAATGCTTGCAAAGGCAATTGCTACTGAAGC TGGTGCAAACTTTATCAACATTTCTATGTCAAGTATCACGTCTAAGTGGTTTGGCGAGGGTGAAAAATATGTGAAAGCTGTTTTCTCTCTGGCTAGTAAA ATTGCTCCTAGTGTTATATTTGTCGATGAAGTTGACAGTATGTTGGGACGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAAT TCATGGTAAACTGGGATGGATTACGTACAAAGGAAACTGAGCGAGTTCTTGTGCTTGCAGCCACTAATAGGCCCTATGACCTAGATGAGGCTGTCATACG GAGGTTGCCTCGGAGATTAATGGTAAATTTACCTGATGCTCCGAACAGAGCAAAAATATTAAAAGTCATACTAGCTAAAGAGGACTTGTCTTCTGATATT GCTTTGGAGGCAATTGCAAGTATGACTGATGGATATTCCGGAAGTGATCTTAAGAATTTGTGTGTAACAGCTGCACACCGTCCAATTAAAGAAATATTAG AAAAAGAAAAGAAGGAACATGCTGCTGCTCTAGCCGAAGGAAGACCTGCTCCAGCATTAAGTGGAAGTGCGGATATCCGATCCTTGAACATGGAAGACTT TAGACATGCTCATCAACAGGTATGTGCAAGTGTTTCATCCGAATCCGTGAATATGACTGAGCTTTTACAATGGAATGAACTATATGGCGAAGGTGGTTCA AGAAGAAAAAGCTCACTCAGCTATTTCATGTGAGAGTCTCTGTACAAATGTTTACCCTACTCCATGTCCCGAAGCCTGCAGTTTTTCCGGTCTCCTGAGA CTTGCAGAGATGCCTGCCGACCCATTTCGTATGTAAAATGAAATATAGATTTTGTAAGTTAATTTTTCTTCTTCTTACCTGTGGGATGGTGGGTTCTGAA AGGATGGAGCCTTTTACAGAATTTTGATCAGGCTACACTGCTTTTTATTTTGTTCCTATTCCCCCTGCCTCCACCAATGAAGACCCATGTTGGAATTTGA AGTTATATAAGTGTCTTGGTAGAGGAAGTAAATATAAGTGTCATTAGACCACCCTCTGAAAACATTTATGGCTCCTAATGGAATTTGCTGGAACAATAAA GCATTTAATGATAATGACTATTTAATGTTTTATGTACATATCCATCATTGATGCCGCATTGTTAGAATTCTGTGTTCATTATAAATCTTCATCGTTTTTT CTTCCAAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_193007;
• Additional information: details;

Expression of Ll_transcript_349104

FPKM

• PAB: 3.1
• PNAB: 1
• PS1: 3.5
• PS2: 3
• PS3: 5
• PW1: 1.9
• PW2: 4.6
• PW3: 7.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349104

• Blastp: ATPase family AAA domain-containing protein 1-A from Danio with 42.66% of identity
• Blastx: ATPase family AAA domain-containing protein 1-A from Danio with 43.84% of identity
• Eggnog: Aaa atpase(COG0464)
• Kegg: Link to kegg annotations (368672)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417132.1)
• Pfam: FHA domain (PF00498.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;