Ll_transcript_349107

• Id Trinity: TRINITY_DN52471_c1_g1_i18
• Name Transcript: Ll_transcript_349107
• Sequence: ATAGTAATTCATAAACCCATAACTATCATTTCTCTTCTGTCATTGAAGCAAAAGAAGCAGAAGAAACACACAGCAATGGTTTCAACGGGAAGCAACACTG AATCTCTCTCCTCCAACAACACAAAACAACATTCTTCCTCTTCCGACGACAAACCTCCATCTCCGCTACCTTCCTCAGAACGACAAAAGGTTGATAATGA CGGCGCCGAGTCCGAGAAGCCGGTGCCGGCGGCGGAGAATTCAAAGGACTTGATAACTGTTGAGCCTCCGGCACGTTCCGGCGATACTCAGATCACTTCA GCTGGCGGTGCTGGTGGCAAAGATGACGGTGTGCCTGCCGTGGATGTGACGGCACCGATTGCTGAGGCCAAAGAAGAAGAAGAAACACACACAGCAATGG TTTCAACGAGAAGCAACACTGAATCTCTCTCCCCCAACAACACTAAACGGCCTTCTTCATCTTCCGACGACAAACCTCCTTCTCCTTCTCCTTCGCCAAA ACGACAAAAGGTTGATAATGATGGTGCTGAGTCCGAGAAACCGGTGCCGGCGGCGGAGAATTCCGAGGATTTGAGAACTCTTGAGCCTCCGGCTGATGCC GGCGATACTCAGATCGCTTCAGCTGGCGGTGCTGATGGTGAAGGTGACGTTGTGCCTGCCGTGGATGTGAAGGCACCGCTTGCTGAGGGTACTCTTTTTG GCAGGCCTTTGCCAATAATTTTGGTGGCTGAAAAGCCAAGACCTTCTTTCTCTTCATGGAGCATGTATCAGAAGCAGAATCCAAAAACTGATTGTTCAGT TCCCTGGTGCAGGCTTTTAACTCAGTCTTCACAGGATCCAAATGTTGTCATTTGCATGCCGAACTTCATGATTGGTTCGAGTAGAAATTGCAACTTTCTG TTGAAGGATCAGACTACAAGTGGAATTTTATGCAAGATCAAACATACTGAGTGTGAGGGAAATGCTGTAGCTGTGCTACAAAGTATGGGTAGCAAAGGAT CAGTGCTAGTAAATGGGATGCTTGTCAAGAAGAACACTAGCTGTGTGCTTAACTCGGGTGACGAGGTGGTTTTTGGGTTGTTTCTTGGGAATCATTCTTA TATTTTTCAGCAACTAAATACTGAAATTGCTGTTAAGGGTGCAGAAGTTCAAAATTGTGCTGGGAAATTTGTGCAGATTGATAGGAGAAATCGAGACCCT TCAGCTTTGGGAGCTGAGCTTAATGGTCTCGAAGGCAACTCAGCTCCAAATGTAGGGGCTGATAAGGCTTCTGATGTTGGAGCAAGCGACAAAAACTCTC CTTTGGATTGTGATCCAGATGATACAGGCACAGAAGCAGGCAATGTATTGGAAGAAAGAAATGGGACGAGGGATACACTAGGTGCATCGACTTCGGGTAC GTCTGTGCGCTGTGCAGTTTTTAAGGCAAATGTTGAAGCGGCAATTCTGGATGGAAAAGAAACGGATGTGTCTTTCGACAACTTCCCATACTATTTAAGT GAGGATACAAAAAAGGTCTTGGTGGCAGCATGCTTTATACACCTAAAGCATAAAGAACATGCAAAGTATACCACAGATCTTACAACCATAAACCCTCGTA TTCTACTCTCGGGACCTGCAGGATCAGAAATATACCAAGAGATGTTGGCAAAAGCACTAGCAAATTACTTTGGTGCTAAATTGCTCATATTTGATAGCCA TTTGCTTTTGGGTGGTTTATCTTCAAAGGAAGCTGAGCTGCTCAAAGATGGATCCCATGCTGATAAATCCTGCAGCTCCGCCAAGCAAAGTCCTACAGCC ACAGACATGGCTAGGAGCATGGATCCATCAACTAGCGACACTGATACACCTAGCTCTTCAAATACACCTACTCCACATGGTCTCGAGTCCCAACCTAAGC TAGAAATTGATAGTGTAGCATCTACCTCTGGGACAGCTAAAAATTGTTTGTTTAAACTAGGTGATAAGGTAAAATATAGCTGCTCATCTTCTGGTACATT ATATCAGACATCTTCTTCAAGGGGTCCAACTAATGGAAGTCGTGGAAAGGTTGTCTTGGTTTTTGAGGAAAATCCCTTGTCAAAAGTTGGTGTAAGATTT GATAAACCTGTACCTGATGGAGTTGATCTTGGAGGTGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTCAATGATCTTCGTTTGGAAAACAGTGGTG TGGAGGAACTGGACAAATTGCTTATCAATTCGTTGTTTGAGGTTGTTTACAGTGAGAGCAGAAATGCCCCATTTATTTTATTCATGAAGGATGCTGAGAA GTCTGTAGTAGGAAACGGAGATCCATTTTCATTTAAAAGTAGGCTTGAAAACCTTCCCGACAATGTGGTGGTAATAGGTTCACACACTCACACCGACAGT AGAAAGGAAAAGTCACATCCCGGGGGTTTGCTTTTTACGAAATTCGGTAGCAATCAGACTGCCCTTCTTGACTTGGCTTTTCCGGATGGTTTTGGACGAT TGCATGACAGAGGAAAGGAAGTCCCAAAGCCAAACAAAATGTTGATTAAGCTGTTCCCTAATAAAGTTACAATTCACATGCCACAGGATGAGGCACTTCT AGCATCTTGGAAGCAGCAACTGGATCGAGATGTCGAGACTCTTAAAATCAAAGGAAATTTACATCACTTGCGCACAGTTTTAGGCCGTTGCGGAATGGAA TGCGAAGGACTTGAGACCTTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATAGTCGGTTGGGCTTTAAGCCACCACCTCATGCAGA ATTCTACAGCTAATCCTGATTCAAAGCTTGTATTGTCTTGTGATAGCATCCAGTATGGAATTGAGATCTTGCATTCTATACAGAATGAGCCCAAGAGCCT GAAGAAGTCTCTTAAGGATATTGTAACAGAAAACGAGTTTGAAAAGAAGCTTTTGGCTGATGTTGTTCCACCCAGTGACATTGGTGTTTCTTTTGATGAT ATTGGAGCTCTAGAAAATGTGAAGGATACACTTAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCACAGCTGTTTTGCAAGGGACAGTTAACCAAGCCGT GCAAGGGTATCCTATTATTTGGTCCCCCTGGAACAGGTAAAACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCGAACTTCATCAACATTTCTAT GTCAAGTATTACATCTAAGGTTCAATTTGTGCCTCTGGATGTATTTAATCTTACCAATATCAGTTTGTTGCGCATGTTAACTCATGTTCTTGCCCCCTTT TGCTTTAGTGGTTTGGTGAGGGCGAAAAATATGTGAAAGCTGTTTTCTCTCTGGCTAGTAAAATTGCTCCTAGTGTTATATTTGTGGATGAAGTTGACAG TATGTTGGGCCAGAGGGAAAATTCAGGGGAGCATGAGGCCATGCGGAAGATGAAAAATGAATTCATGGTGAATTGGGATGGGTTACG
• Tissue: pods
• Gene name: LI_gene_193007;
• Additional information: details;

Expression of Ll_transcript_349107

FPKM

• PAB: 0.4
• PNAB: 0.7
• PS1: 1.3
• PS2: 1.7
• PS3: 3
• PW1: 0.2
• PW2: 0.2
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349107

• Blastp: Protein MSP1 from Saccharomyces with 47.47% of identity
• Blastx: Protein SAP1 from Saccharomyces with 41.06% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YGR028W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415674.1)
• Pfam: FHA domain (PF00498.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;