Ll_transcript_349109

• Id Trinity: TRINITY_DN52471_c1_g1_i20
• Name Transcript: Ll_transcript_349109
• Sequence: CTTGTCTATTTATATCCCCCATTTTCCTGTAGTTGCATCCAAACAAACAGAAACACAGAAACACAGAACACAAAACACAAAACACATCAATGGTTTCAAC AAGACGCAACACTGGATCTCTCTCTTCCAACAACACTAAACGTCCTTCTTCTTCTTCCGACGATAATAACAAGCCTCCTTCTTCTCCTTCTTCAAAACGA CATAAGGTTGATAATGGTGGCGACACGTCGGAGAAACCGACGCCGGCGGCGGAGAATTGTAAGGATTTGAGAACTCTTGAGCCTCCTGCCGATCCCGGAG AATGCGGTACCGGCGATACTCAGATCTCTGAAGCTGGCGGTGCTGATCGGAAATGTGACGCTGCGCCTGCAGTGGCTGTGGCAGCTCCGATTGCTGAAGG ATCTTCGCCAACAACCTTGGTGGCTGAGAAACAAAGGGCTTCTTTTTCTTCATGGGGGATATATCAGAAGCAGAATCAAAAAACTGAATGTTCAGTTCCC TGGTGCAGGCTATTGACTCAGTCTTCACAGAATCCAAATGTTATCATTTGTACACCGAATTTCACGATCGGTTCAAGTAGAAATTGCAATTTTCCATTGA AGGATCAGACTATAAGTGGAAATTTATGCAAGATCAAGCATACTGAGTGTGAGGGAAGTACTGTAGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCTGT GCTAGTAAATGGGACGCTTGTCAAGAAGAACACCAGCTCTGTGCTTAACTCAGGCGATGAGGTGGTTTTTGGGTTGCTGGGAAATCATTCTTATATTTTT CAGCAACTAAATACCGAAGGCACAGTTAAGGGTGCAGACATTCAGAATGGTGTTGGGAAATTTGTGCAGATTGAAAGGAGAAATAGAGACTCTTCAGCTG TGGCAGGGGCTTCCATCTTGGCTTCTCTTTCTAGCCTCAAACATGATCTTACAAAATTGAAGTCTCCATCTGAGACTGCCAATAAACCTCATCATGTTAA TGATGTTTCTGGTCATTCTGTTCTCCGTGATGGTACAGAAGCTGAGCTTGACGGTCTTCAAAGCAACTCAGCTCCAAATGTGGGGACGGATAAGGCTTCT GATGTTGGAGCAAGCGACAAAAACTCTCCTTTGGATTGTGATCCAGATGATACAGGCACAGAAGCAGGCAATGTAAAACTCTCTGGGGTGAATGATTTCC TAGGGCCTTTCTTCAGGATCCTTGCTGGATCTAATTGTAAACTGAAATTGAGAAAAAATATCTGTAAACAGGTATTGGAAGAAAGAAATGGGACGAGGGA TACACTAGGTGCATCGACTTCGGGTACGTCTGTGCGCTGTGCAGTTTTTAAGGCAAATGTTGAAGCGGCAATTCTGGATGGAAAAGAAACGGATGTGTCT TTCGACAACTTCCCATACTATTTAAGTGAGGATACAAAAAAGGTCTTGGTGGCAGCATGCTTTATACACCTAAAGCATAAAGAACATGCAAAGTATACCA CAGATCTTACAACCATAAACCCTCGTATTCTACTCTCGGGACCTGCAGGATCAGAAATATACCAAGAGATGTTGGCAAAAGCACTAGCAAATTACTTTGG TGCTAAATTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCTTCAAAGGAAGCTGAGCTGCTCAAAGATGGATCCCATGCTGATAAATCCTGC AGCTCCGCCAAGCAAAGTCCTACAGCCACAGACATGGCTAGGAGCATGGATCCATCAACTAGCGACACTGATACACCTAGCTCTTCAAATACACCTACTC CACATGGTCTCGAGTCCCAACCTAAGCTAGAAATTGATAGTGTAGCATCTACCTCTGGGACAGCTAAAAATTGTTTGTTTAAACTAGGTGATAAGGTAAA ATATAGCTGCTCATCTTCTGGTACATTATATCAGACATCTTCTTCAAGGGGTCCAACTAATGGAAGTCGTGGAAAGGTTGTCTTGGTTTTTGAGGAAAAT CCCTTGTCAAAAGTTGGTGTAAGATTTGATAAACCTGTACCTGATGGAGTTGATCTTGGAGGTGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTCA ATGATCTTCGTTTGGAAAACAGTGGTGTGGAGGAACTGGACAAATTGCTTATCAATTCGTTGTTTGAGGTTGTTTACAGTGAGAGCAGAAATGCCCCATT TATTTTATTCATGAAGGATGCTGAGAAGTCTGTAGTAGGAAACGGAGATCCATTTTCATTTAAAAGTAGGCTTGAAAACCTTCCCGACAATGTGGTGGTA ATAGGTTCACACACTCACACCGACAGTAGAAAGGAAAAGTCACATCCCGGGGGTTTGCTTTTTACGAAATTCGGTAGCAATCAGACTGCCCTTCTTGACT TGGCTTTTCCGGATGGTTTTGGACGATTGCATGACAGAGGAAAGGAAGTCCCAAAGCCAAACAAAATGTTGATTAAGCTGTTCCCTAATAAAGTTACAAT TCACATGCCACAGGATGAGGCACTTCTAGCATCTTGGAAGCAGCAACTGGATCGAGATGTCGAGACTCTTAAAATCAAAGGAAATTTACATCACTTGCGC ACAGTTTTAGGCCGTTGCGGAATGGAATGCGAAGGACTTGAGACCTTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATAGTCGGTT GGGCTTTAAGCCACCACCTCATGCAGAATTCTACAGCTGATCCTGATTCAAAGCTGGTCTTGTCTTGTGACAGCATCCAGTATGGAATTGAGATCTTGCA TTCTATACAGAATGAGCCCAAGAGCCTGAAGAAGTCTCTTAAGGATATTGTAACAGAAAACGAGTTTGAAAAGAAGCTTTTGGGTGATGTTATTCCACCT AGTGACATTGACGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACACTGAAGGAATTGGTGATGCTTCCTTTACAGAGGCCTGAGCTGT TTTGCAAGGGACAATTAACCAAGGTTATGCTTTCTTCATAGATAGACTTTTATTAAAAGTTTTCATTTCTGCTCTTTATTCAGCTGACCGTGTTTGAGAA TTGAGATAGATCCCACTATTTTTTTGCCTCTTTTATCACATACTTTTACTAATTTGCTGAAATTTTCATGGATTTATTGATTTTATGATGATTTTGATGG CTGTGGTGATGCCTTCTCCCTGTCCCCAGTTGAAAAGAGAGGGGGATCTGTACCAACAAGATCTAGTGGCGTAAGGCTCCGCTAGATCCCCATAAAGACC AAAAGGTCAAGGGTTCGATTCCTATTAGCGACACTTGTTGGGGGCAGCCACGCACCCCGAAAATGTTTAGTTTCTTACTCATAGGGTGACGAGATACCCT TGGTAGTACCAAAAAAAT
• Tissue: pods
• Gene name: LI_gene_193007;
• Additional information: details;

Expression of Ll_transcript_349109

FPKM

• PAB: 0.3
• PNAB: 0
• PS1: 0.1
• PS2: 0.2
• PS3: 0
• PW1: 0
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349109

• Blastp: Peroxisomal biogenesis factor 6 from Colletotrichum with 44.26% of identity
• Blastx: Peroxisomal biogenesis factor 6 from Colletotrichum with 44.26% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417132.1)
• Pfam: FHA domain (PF00498.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;