Ll_transcript_349087

• Id Trinity: TRINITY_DN52471_c1_g1_i9
• Name Transcript: Ll_transcript_349087
• Sequence: CTTGTCTATTTATATCCCCCATTTTCCTGTAGTTGCATCCAAACAAACAGAAACACAGAAACACAGAACACAAAACACAAAACACATCAATGGTTTCAAC AAGACGCAACACTGGATCTCTCTCTTCCAACAACACTAAACGTCCTTCTTCTTCTTCCGACGATAATAACAAGCCTCCTTCTTCTCCTTCTTCAAAACGA CATAAGGTTGATAATGGTGGCGACACGTCGGAGAAACCGACGCCGGCGGCGGAGAATTGTAAGGATTTGAGAACTCTTGAGCCTCCTGCCGATCCCGGAG AATGCGGTACCGGCGATACTCAGATCTCTGAAGCTGGCGGTGCTGATCGGAAATGTGACGCTGCGCCTGCAGTGGCTGTGGCAGCTCCGATTGCTGAAGG ATCTTCGCCAACAACCTTGGTGGCTGAGAAACAAAGGGCTTCTTTTTCTTCATGGGGGATATATCAGAAGCAGAATCAAAAAACTGAATGTTCAGTTCCC TGGTGCAGGCTATTGACTCAGTCTTCACAGAATCCAAATGTTATCATTTGTACACCGAATTTCACGATCGGTTCAAGTAGAAATTGCAATTTTCCATTGA AGGATCAGACTATAAGTGGAAATTTATGCAAGATCAAGCATACTGAGTGTGAGGGAAGTACTGTAGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCTGT GCTAGTAAATGGGACGCTTGTCAAGAAGAACACCAGCTCTGTGCTTAACTCAGGCGATGAGGTGGTTTTTGGGTTGCTGGGAAATCATTCTTATATTTTT CAGCAACTAAATACCGAAGGCACAGTTAAGGGTGCAGACATTCAGAATGGTGTTGGGAAATTTGTGCAGATTGAAAGGAGAAATAGAGACTCTTCAGCTG TGGCAGGGGCTTCCATCTTGGCTTCTCTTTCTAGCCTCAAACATGATCTTACAAAATTGAAGTCTCCATCTGAGACTGCCAATAAACCTCATCATGTTAA TGATGTTTCTGGTCATTCTGTTCTCCGTGATGGTACAGAAGCTGAGCTTGACGGTCTTCAAAGCAACTCAGCTCCAAATGTGGGGACGGATAAGGCTTCT GATGTTGGAGCAAGCGACAAAAACTCTCCTTTGGATTGTGATCCAGATGATACAGGCACAGAAGCAGGCAATGTATTGGAAGAAAGAAATGGGACGAGGG ATACACTAGGTGCATCGACTTCGGGTACGTCTGTGCGCTGTGCAGTTTTTAAGGCAAATGTTGAAGCGGCAATTCTGGATGGAAAAGAAACGGATGTGTC TTTCGACAACTTCCCATACTATTTAAGTGAGGATACAAAAAAGGTCTTGGTGGCAGCATGCTTTATACACCTAAAGCATAAAGAACATGCAAAGTATACC ACAGATCTTACAACCATAAACCCTCGTATTCTACTCTCGGGACCTGCAGGATCAGAAATATACCAAGAGATGTTGGCAAAAGCACTAGCAAATTACTTTG GTGCTAAATTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCTTCAAAGGAAGCTGAGCTGCTCAAAGATGGATCCCATGCTGATAAATCCTG CAGCTCCGCCAAGCAAAGTCCTACAGCCACAGACATGGCTAGGAGCATGGATCCATCAACTAGCGACACTGATACACCTAGCTCTTCAAATACACCTACT CCACATGGTCTCGAGTCCCAACCTAAGCTAGAAATTGATAGTGTAGCATCTACCTCTGGGACAGCTAAAAATTGTTTGTTTAAACTAGGTGATAAGGTAA AATATAGCTGCTCATCTTCTGGTACATTATATCAGACATCTTCTTCAAGGGGTCCAACTAATGGAAGTCGTGGAAAGGTTGTCTTGGTTTTTGAGGAAAA TCCCTTGTCAAAAGTTGGTGTAAGATTTGATAAACCTGTACCTGATGGAGTTGATCTTGGAGGTGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTC AATGATCTTCGTTTGGAAAACAGTGGTGTGGAGGAACTGGACAAATTGCTTATCAATTCGTTGTTTGAGGTTGTTTACAGTGAGAGCAGAAATGCCCCAT TTATTTTATTCATGAAGGATGCTGAGAAGTCTGTAGTAGGAAACGGAGATCCATTTTCATTTAAAAGTAGGCTTGAAAACCTTCCCGACAATGTGGTGGT AATAGGTTCACACACTCACACCGACAGTAGAAAGGAAAAGTCACATCCCGGGGGTTTGCTTTTTACGAAATTCGGTAGCAATCAGACTGCCCTTCTTGAC TTGGCTTTTCCGGATGGTTTTGGACGATTGCATGACAGAGGAAAGGAAGTCCCAAAGCCAAACAAAATGTTGATTAAGCTGTTCCCTAATAAAGTTACAA TTCACATGCCACAGGATGAGGCACTTCTAGCATCTTGGAAGCAGCAACTGGATCGAGATGTCGAGACTCTTAAAATCAAAGGAAATTTACATCACTTGCG CACAGTTTTAGGCCGTTGCGGAATGGAATGCGAAGGACTTGAGACCTTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATAGTCGGT TGGGCTTTAAGCCACCACCTCATGCAGAATTCTACAGCTGATCCTGATTCAAAGCTGGTCTTGTCTTGTGACAGCATCCAGTATGGAATTGAGATCTTGC ATTCTATACAGAATGAGCCCAAGAGCCTGAAGAAGTCTCTTAAGGATATTGTAACAGAAAACGAGTTTGAAAAGAAGCTTTTGGGTGATGTTATTCCACC TAGTGACATTGACGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACACTGAAGGAATTGGTGATGCTTCCTTTACAGAGGCCTGAGCTG TTTTGCAAGGGACAATTAACCAAGGTTATGCTTTCTTCATAGATAGACTTTTATTAAAAGTTTTCATTTCTGCTCTTTATTCAGCTGACCGTGTTTGAGA ATTGAGATAGATCCCACTATTTTTTTGCCTCTTTTATCACATACTTTTACTAATTTGCTGAAATTTTCATGGATTTATTGATTTTATGATGATTTTGATG GCTGTGGTGATGCCTTCTCCCTGTCCCCAGTTGAAAAGAGAGGGGGATCTGTACCAACAAGATCTAGTGGCGTAAGGCTCCGCTAGATCCCCATAAAGAC CAAAAGGTCAAGGGTTCGATTCCTATTAGCGACACTTGTTGGGGGCAGCCACGCACCCCGAAAATGTTTAGTTTCTTACTCATAGGGTGACGAGATACCC TTGGTAGTACCAAAAAAAT
• Tissue: pods
• Gene name: LI_gene_193007;
• Additional information: details;

Expression of Ll_transcript_349087

FPKM

• PAB: 0.4
• PNAB: 0.3
• PS1: 0.6
• PS2: 0.5
• PS3: 0.2
• PW1: 0.6
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349087

• Blastp: Peroxisomal biogenesis factor 6 from Colletotrichum with 44.26% of identity
• Blastx: Peroxisomal biogenesis factor 6 from Colletotrichum with 44.26% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417132.1)
• Pfam: FHA domain (PF00498.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;