Ll_transcript_349089

• Id Trinity: TRINITY_DN52471_c1_g4_i1
• Name Transcript: Ll_transcript_349089
• Sequence: CTTGGCTTTCCCTGATGGTTTTGGAAGATTGCATGAAAGGGGAAAGGAAGTCCCAAAGCCAAACAAAACTTTGACTAAGCTTTTTCCAAATAAAGTAACA ATTCTCATGCCACAGGATGAGGGGCTTTTAGCATCTTGGAAACAGCAACTCAATCGAGATGTTGAGACTCTCAAAATCAATGCAAATTTGCACCTTTTGC GCACAGTTTTAAGCCGTTGTGGAATGCAATGCGAAGGACTTGAGACCTTGTGCATTAAGGATCAGACACTTACAGATGAAGATGTAGAGAAGATTGTTGG CTGGGCTTTAAGCCACCACCTCATGCAGAGTTCTGAAGTTAATCATGTTGAAAAGCTTGTGTTGTCTTGTGAAAGTGTCCAGTATGGAATTGGGATTTTA CAGGCTATCCAGAATGAGTCAAAGAGCACGAAGAAGTCTCTTCTGGATGTTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTAGATGATGTTATTCCAC CTAATGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACAATGAAGGAATTGGTTATGCTTCCTTTACAGAGACCTGAGCT TTTTTGCAAGGGGCAATTAGCCAAGCCATGCAAGGGTATCCTTTTATTTGGACCCCCTGGAACTGGTAAGACAATGCTTGCGAAAGCAGTTGCAACTGAA GCAGGTGCAAACTTCATTAATATTTCCATGTCAAGCATTACGTCTAAGTGGTTTGGTGAGGCTGAAAAATATGTAAGAGCTATTTTCTCCCTGGCGAGTA AAATTGCTCCTAGTGTTATATTTGTTGACGAAGTTGATAGCATGTTGGGCAGGAGGGAAAATACTGGGGAGCATGAGGCCATGCGAAAAATGAAAAATGA ATTCATGATTAACTGGGATGGCTTACGTACAAAGGAAACTGATCGAGTTCTTGTGCTTGCAGCCACAAACAGGCCTTATGACCTTGATGAGGCTGTCATA CGGAGGATGCCGCGGAGATTAATGGTAAATTTGCCTGATGCTCCAAATAGAGCAAAAATATTAAAAGTTATACTGGCAAAAGAGGACTTGTCTTCTGATG TTGACCTGGATGCAATTGCAAGTATGACTGGTGGATATTCTGGAAGTGATCTTAAGAATTTTTGTGTAACTGCTGCATACCGTCCCATTAAAGAGTTATT AGAAAAAGAAAAGAAGGAACAAGCTGCTGCTCTAGCCGAAGGTAGACCTGCTCCAGCACTAAGTGGAAGTGCAGATATCCGATCTTTGAACATGGAAGAT TTCAGACATGCTCATCAACAGGTATGTGCAAGTGTTTCCTCCGAATCCGTAAATATGACCGAGCTTTTACAATGGAATGAACTATATGGTGAAGGTGGTT CAAGAAAAAAAAGCTCACCCAGCTATTTCATGTGAGAGTCTCCTCTGTACAGATGTTTACCCTCATTACCTACACCATGTTCCTGCAGAGATGTTTTCTT TATAAAATGAAATATAGGTTTTATATTTTTCCTTACCTGTGTGATGGTGGGTTTTGAAAGGAATGGAGCCTGTTCAGAAATTTGGCCAGGTTTCATTGCT TTTATTTTGTTCCTAATCCCCCATGCCCCACCACAGAAGACCCATGTTGAAATTATAAGTTATATAACTGTCTTATTAGAGGAAGAAAGTGATAAGTGAC ATAAAAACCTCTTGAAATATTTATCATCATTCCTAATGGAAATTGGTGGAACAATAAAGCATTTAGTGTTCATGTTTATATAATGTTTCATGTACATGTC ATTCATCTTACATCTCCATTTGGTTATCTGCCTATGTTTGCAAGTCAGTGATGATGCTATGTTACAATTTTTT
• Tissue: pods
• Gene name: LI_gene_193010;
• Additional information: details;

Expression of Ll_transcript_349089

FPKM

• PAB: 1.2
• PNAB: 6.5
• PS1: 10.8
• PS2: 9.2
• PS3: 13.5
• PW1: 6.6
• PW2: 7.7
• PW3: 9.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349089

• Blastp: Protein MSP1 from Saccharomyces with 39.89% of identity
• Blastx: Protein MSP1 from Saccharomyces with 44.12% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YGR028W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415674.1)
• Pfam: Holliday junction DNA helicase ruvB N-terminus (PF05496.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;