Ll_transcript_349101

• Id Trinity: TRINITY_DN52471_c1_g4_i7
• Name Transcript: Ll_transcript_349101
• Sequence: CTTGGCTTTCCCTGATGGTTTTGGAAGATTGCATGAAAGGGGAAAGGAAGTCCCAAAGCCAAACAAAACTTTGACTAAGCTTTTTCCAAATAAAGTAACA ATTCTCATGCCACAGGATGAGGGGCTTTTAGCATCTTGGAAACAGCAACTCAATCGAGATGTTGAGACTCTCAAAATCAATGCAAATTTGCACCTTTTGC GCACAGTTTTAAGCCGTTGTGGAATGCAATGCGAAGGACTTGAGACCTTGTGCATTAAGGATCAGACACTTACAGATGAAGATGTAGAGAAGATTGTTGG CTGGGCTTTAAGCCACCACCTCATGCAGAGTTCTGAAGTTAATCATGTTGAAAAGCTTGTGTTGTCTTGTGAAAGTGTCCAGTATGGAATTGGGATTTTA CAGGCTATCCAGAATGAGTCAAAGAGCACGAAGAAGTCTCTTCTGGATGTTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTAGATGATGTTATTCCAC CTAATGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACAATGAAGGAATTGGTTATGCTTCCTTTACAGAGACCTGAGCT TTTTTGCAAGGGGCAATTAGCCAAGCCATGCAAGGGTATCCTTTTATTTGGACCCCCTGGAACTGGTAAGACAATGCTTGCGAAAGCAGTTGCAACTGAA GCAGGTGCAAACTTCATTAATATTTCCATGTCAAGCATTACGTCTAAGTGGTTTGGTGAGGCTGAAAAATATGTAAGAGCTATTTTCTCCCTGGCGAGTA AAATTGCTCCTAGTGTTATATTTGTTGACGAAGTAAGCCTTTTACATGAAATGTTGGTGGATTGTATTAATTCATCAGTTGACGAATAAATCACAGCGAA GAGGCTTGGTTTCTTGTATAGGTTGATAGCATGTTGGGCAGGAGGGAAAATACTGGGGAGCATGAGGCCATGCGAAAAATGAAAAATGAATTCATGATTA ACTGGGATGGCTTACGTACAAAGGAAACTGATCGAGTTCTTGTGCTTGCAGCCACAAACAGGCCTTATGACCTTGATGAGGCTGTCATACGGAGGATGCC GCGGAGATTAATGGTAAATTTGCCTGATGCTCCAAATAGAGCAAAAATATTAAAAGTTATACTGGCAAAAGAGGACTTGTCTTCTGATGTTGACCTGGAT GCAATTGCAAGTATGACTGGTGGATATTCTGGAAGTGATCTTAAGAATTTTTGTGTAACTGCTGCATACCGTCCCATTAAAGAGTTATTAGAAAAAGAAA AGAAGGAACAAGCTGCTGCTCTAGCCGAAGGTAGACCTGCTCCAGCACTAAGTGGAAGTGCAGATATCCGATCTTTGAACATGGAAGATTTCAGACATGC TCATCAACAGGTATGTGCAAGTGTTTCCTCCGAATCCGTAAATATGACCGAGCTTTTACAATGGAATGAACTATATGGTGAAGGTGGTTCAAGAAAAAAA AGCTCACCCAGCTATTTCATGTGAGAGTCTCCTCTGTACAGATGTTTACCCTCATTACCTACACCATGTTCCTGCAGAGATGTTTTCTTTATAAAATGAA ATATAGGTTTTATATTTTTCCTTACCTGTGTGATGGTGGGTTTTGAAAGGAATGGAGCCTGTTCAGAAATTTGGCCAGGTTTCATTGCTTTTATTTTGTT CCTAATCCCCCATGCCCCACCACAGAAGACCCATGTTGAAATTATAAGTTATATAACTGTCTTATTAGAGGAAGAAAGTGATAAGTGACATAAAAACCTC TTGAAATATTTATCATCATTCCTAATGGAAATTGGTGGAACAATAAAGCATTTAGTGTTCATGTTTATATAATGTTTCATGTACATGTCATTCATCTTAC ATCTCCATTTGGTTATCTGCCTATGTTTGCAAGTCAGTGATGATGCTATGTTACAATTTTTT
• Tissue: pods
• Gene name: LI_gene_193010;
• Additional information: details;

Expression of Ll_transcript_349101

FPKM

• PAB: 0.3
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.4
• PS3: 0.2
• PW1: 0.1
• PW2: 0.1
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349101

• Blastp: Protein MSP1 from Saccharomyces with 42.64% of identity
• Blastx: ATPase family AAA domain-containing protein 1-A from Danio with 37.65% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YGR028W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417132.1)
• Pfam: Holliday junction DNA helicase ruvB N-terminus (PF05496.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;