| Id Trinity | TRINITY_DN52475_c1_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_350766 |
| Sequence | CACGGGTATTGTACTACCTGTACCTGCGGGTACCTGGTATTTGTGTAATTATCATATTACCCTTGATTAAAGTACACACACTTTCCTAATACCCTAACCC ACTTAGAACCTACTCTTTTTCCGTAAAAACCTAATCCCCTTTCTCATTCCCTTCTCTAATTTATCTCTCCTTCCAGCAGCCAAGAGCCCAAGAGGTTAGT TTCTTTTTCTCATTCCCTTCTCTAATGTTAGGTTTTGTTTCTAATTGTCACACACCTTACTTCCATCTTCCATCTTCTAATGTTTCGTTTTGATCTTCCT AGTTTCTCCAAGAGGTGAGGTTAATAACGTGTTTTATTAGAATCTGTCCAGTTTCACTTTCTTACTTCCAGTTTCTCTTTCCCTTGCTTTATGAGTGCTC TAACAACCACTTTACAAACTGAACCACTTCATCATCAAATGTTATGTTTTTTTCACCTCTGAAATTAACACCTGCTTCTGAGTTCATGAAGGTGATGATT CCTCGTTGAAAAAAATGTTCTTTTTCTCTGAGTTCATGAAGGTGTTGATTTCTCATTGCATTCTAGGTGAATTTGGAAACATTGTTTTTTCCAAATTAAT TCAATTATTTTCTGGGTGAATTTGGAAACATTGCATTCTGGGTGAATTGGGTTAATTTGGAAACATTGCAGTCTATGAAATTAGTAAAAATTTAATAATG GGTTGTTCAAAGCTTAACATGGTTTTTATTTAGAAAACTTGCTTTCTTTATGTTATTTCCTTTTACATGACCTCACTTACACATATGTATTGCCTATTAT GCCTCTAGTTATCTACTAAATTATAATTTTTATATTGTATCTATGCAATATGTCTACTGAGCAAGCCTCTGTTGGGCAAGATCAAGTTCCCAATGCCTCT AATGTGGGTGAATCAAACTCAGTTCCAATTAATGTAGATGTTCCTTCGATTCAAGATGAAACTCATTGTTCAAGTCCAAATGATGCTGAAGAAGGTCAAC CACAACAAAGATCATCTGTTTGGAATCATTTTAAGAGGCAAAAGGTAGATGGAAAGTGGAAAGCAGCTTGCAATTATTGTGGCAAGCGACTATTAGGAGA TCCAAGTCAAGGAACAAAACACTTGCATAATCACTTTAAAAGTTGTCTACGTCATTCAAATTCAGATATAAAGCAAGCACTTCTTAAAACTGCAAAAAAA GGGAATGAATCTGTGTTAGTTGGTTCGTATGCATTCAACCAAGAGGCTGCAAGACACGCACTTGTGAAGATGATAATTTTTCATGAGTACCCAATGTCTA TGGTTGACCGTGTCTTATTTAAGGAATTTTGTGGTGCATTGCAATCTTTATTTAAAGGAATTTCTCGCAACACGGTGAAGGGTGATATCACAAGGATGTA TAATGAAGAGAAAGTGAATATCATGACTTTAATTTCAAAAAATCAAAGTCGGTTTGCAATTACAACCGATATGTGGATCACTAGTAACCAAAACAAAGGC TATATGGCTGTCACGGCACACTTTATTGATGACTCATGGATTCTACAAAGTCGTCTTGTGAGGTTCATATACGTGCCTGCTCCTCATACTAGTGAAGTTC TTAGTGATTGCTTGTATGAATGCCTGTTGGATTGGAATCTAGATAGGAAATTGTCTACTCTTACTGTAGATAATTGTACTACAAATGACCGAATGATTGA GTGCATGTTGTCTAAAATTTCGCCTAGATCATTTCTTTTGGCTGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_193030; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_350766
| Blastp | Zinc finger BED domain-containing protein RICESLEEPER 3 from Oryza sativa with 33.2% of identity |
|---|---|
| Blastx | Zinc finger BED domain-containing protein RICESLEEPER 3 from Oryza sativa with 33.2% of identity |
| Eggnog | transposon protein(ENOG410Y37V) |
| Kegg | Link to kegg annotations (4339741) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427131.1) |
| Pfam | BED zinc finger (PF02892.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |